RNA–Protein interactions for RNA: ENST00000483030.1

CSDE1-206, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-206ENST00000483030 LOC102724159A0A0B4J2E5 919 aa8.71□□□□□ -1.02
CSDE1-206ENST00000483030 C19orf67A6NJJ6 358 aa8.71□□□□□ -1.02
CSDE1-206ENST00000483030 KIF28PB7ZC32 967 aa8.71□□□□□ -1.02
CSDE1-206ENST00000483030 KPNA6O60684 536 aa8.71□□□□□ -1.02
CSDE1-206ENST00000483030 RFC2P35250 354 aa8.71□□□□□ -1.02
CSDE1-206ENST00000483030 NOVP48745 357 aa8.71□□□□□ -1.02
CSDE1-206ENST00000483030 TAP1Q03518 808 aa8.71□□□□□ -1.02
CSDE1-206ENST00000483030 PDE4DQ08499 809 aa8.71□□□□□ -1.02
CSDE1-206ENST00000483030 PWP2Q15269 919 aaKnown RBP8.71□□□□□ -1.02
CSDE1-206ENST00000483030 BRDTQ58F21 947 aaPredicted RBP8.71□□□□□ -1.02
CSDE1-206ENST00000483030 VPS53Q5VIR6 699 aa8.71□□□□□ -1.02
CSDE1-206ENST00000483030 NFRKBQ6P4R8 1299 aa8.71□□□□□ -1.02
CSDE1-206ENST00000483030 RNF207Q6ZRF8 634 aa8.71□□□□□ -1.02
CSDE1-206ENST00000483030 HERC6Q8IVU3 1022 aa8.71□□□□□ -1.02
CSDE1-206ENST00000483030 PI4K2BQ8TCG2 481 aa8.71□□□□□ -1.02
CSDE1-206ENST00000483030 CLEC4DQ8WXI8 215 aa8.71□□□□□ -1.02
CSDE1-206ENST00000483030 COPS5Q92905 334 aa8.71□□□□□ -1.02
CSDE1-206ENST00000483030 SLC9A7Q96T83 725 aa8.71□□□□□ -1.02
CSDE1-206ENST00000483030 TMEM47Q9BQJ4 181 aa8.71□□□□□ -1.02
CSDE1-206ENST00000483030 EPHX3Q9H6B9 360 aa8.71□□□□□ -1.02
CSDE1-206ENST00000483030 TOMM22Q9NS69 142 aa8.71□□□□□ -1.02
CSDE1-206ENST00000483030 FRMPD2Q68DX3 1309 aaPredicted RBP8.71□□□□□ -1.02
CSDE1-206ENST00000483030 A6NJR5 290 aa8.7□□□□□ -1.02
CSDE1-206ENST00000483030 NKRFO15226 690 aaKnown RBP eCLIP8.7□□□□□ -1.02
CSDE1-206ENST00000483030 TLL1O43897 1013 aa8.7□□□□□ -1.02
CSDE1-206ENST00000483030 ORC4O43929 436 aa8.7□□□□□ -1.02
CSDE1-206ENST00000483030 TXNP10599 105 aaKnown RBP8.7□□□□□ -1.02
CSDE1-206ENST00000483030 TOP1P11387 765 aaKnown RBP8.7□□□□□ -1.02
CSDE1-206ENST00000483030 RPS6P62753 249 aaKnown RBP8.7□□□□□ -1.02
CSDE1-206ENST00000483030 BFSP2Q13515 415 aa8.7□□□□□ -1.02
CSDE1-206ENST00000483030 PPP2R5BQ15173 497 aa8.7□□□□□ -1.02
CSDE1-206ENST00000483030 RRP12Q5JTH9 1297 aaKnown RBP8.7□□□□□ -1.02
CSDE1-206ENST00000483030 SLC30A10Q6XR72 485 aa8.7□□□□□ -1.02
CSDE1-206ENST00000483030 SCFD2Q8WU76 684 aa8.7□□□□□ -1.02
CSDE1-206ENST00000483030 ANAPC4Q9UJX5 808 aa8.7□□□□□ -1.02
CSDE1-206ENST00000483030 COG5Q9UP83 839 aa8.7□□□□□ -1.02
CSDE1-206ENST00000483030 NOD1Q9Y239 953 aa8.7□□□□□ -1.02
CSDE1-206ENST00000483030 MCM3APO60318 1980 aa8.7□□□□□ -1.02
CSDE1-206ENST00000483030 ARIH2O95376 493 aa8.69□□□□□ -1.02
CSDE1-206ENST00000483030 FGAP02671 866 aa8.69□□□□□ -1.02
CSDE1-206ENST00000483030 FGRP09769 529 aa8.69□□□□□ -1.02
CSDE1-206ENST00000483030 EDNRBP24530 442 aa8.69□□□□□ -1.02
CSDE1-206ENST00000483030 PTPN11Q06124 597 aaPredicted RBP8.69□□□□□ -1.02
CSDE1-206ENST00000483030 GRB10Q13322 594 aa8.69□□□□□ -1.02
CSDE1-206ENST00000483030 ALX1Q15699 326 aa8.69□□□□□ -1.02
CSDE1-206ENST00000483030 PTGISQ16647 500 aa8.69□□□□□ -1.02
CSDE1-206ENST00000483030 DIEXFQ68CQ4 756 aaKnown RBP8.69□□□□□ -1.02
CSDE1-206ENST00000483030 SPRED2Q7Z698 418 aa8.69□□□□□ -1.02
CSDE1-206ENST00000483030 TMCO2Q7Z6W1 182 aaPredicted RBP8.69□□□□□ -1.02
CSDE1-206ENST00000483030 DNERQ8NFT8 737 aa8.69□□□□□ -1.02
CSDE1-206ENST00000483030 HLA-CQ95604 372 aa8.69□□□□□ -1.02
CSDE1-206ENST00000483030 MPHOSPH6Q99547 160 aaKnown RBP8.69□□□□□ -1.02
CSDE1-206ENST00000483030 LRFN3Q9BTN0 628 aa8.69□□□□□ -1.02
CSDE1-206ENST00000483030 PCDHB15Q9Y5E8 787 aa8.69□□□□□ -1.02
CSDE1-206ENST00000483030 RAD50Q92878 1312 aa8.69□□□□□ -1.02
CSDE1-206ENST00000483030 BDP1A6H8Y1 2624 aa8.68□□□□□ -1.02
CSDE1-206ENST00000483030 NCOR1O75376 2440 aa8.68□□□□□ -1.02
CSDE1-206ENST00000483030 LCHNA4D1U4 455 aa8.68□□□□□ -1.02
CSDE1-206ENST00000483030 B4DLN1 442 aa8.68□□□□□ -1.02
CSDE1-206ENST00000483030 LPXNO60711 386 aa8.68□□□□□ -1.02
CSDE1-206ENST00000483030 BAIAP3O94812 1187 aa8.68□□□□□ -1.02
CSDE1-206ENST00000483030 PDHBP11177 359 aa8.68□□□□□ -1.02
CSDE1-206ENST00000483030 MX1P20591 662 aa8.68□□□□□ -1.02
CSDE1-206ENST00000483030 KCNJ6P48051 423 aa8.68□□□□□ -1.02
CSDE1-206ENST00000483030 MRPL12P52815 198 aaKnown RBP8.68□□□□□ -1.02
CSDE1-206ENST00000483030 ZNF543Q08ER8 600 aa8.68□□□□□ -1.02
CSDE1-206ENST00000483030 GPNMBQ14956 572 aa8.68□□□□□ -1.02
CSDE1-206ENST00000483030 TMEM132AQ24JP5 1023 aa8.68□□□□□ -1.02
CSDE1-206ENST00000483030 AFG1LQ8WV93 481 aa8.68□□□□□ -1.02
CSDE1-206ENST00000483030 ZBED2Q9BTP6 218 aa8.68□□□□□ -1.02
CSDE1-206ENST00000483030 TCP11L1Q9NUJ3 509 aa8.68□□□□□ -1.02
CSDE1-206ENST00000483030 PNMA2Q9UL42 364 aa8.68□□□□□ -1.02
CSDE1-206ENST00000483030 CHD7Q9P2D1 2997 aa8.68□□□□□ -1.02
CSDE1-206ENST00000483030 RBAK-RBAKDNI3L0D1 243 aa8.67□□□□□ -1.02
CSDE1-206ENST00000483030 GOLGA8HP0CJ92 632 aa8.67□□□□□ -1.02
CSDE1-206ENST00000483030 MYH7P12883 1935 aa8.67□□□□□ -1.02
CSDE1-206ENST00000483030 HAND2P61296 217 aa8.67□□□□□ -1.02
CSDE1-206ENST00000483030 WDR5P61964 334 aaKnown RBP8.67□□□□□ -1.02
CSDE1-206ENST00000483030 DEFB103AP81534 67 aa8.67□□□□□ -1.02
CSDE1-206ENST00000483030 LY6KQ17RY6 165 aa8.67□□□□□ -1.02
CSDE1-206ENST00000483030 USH1GQ495M9 461 aa8.67□□□□□ -1.02
CSDE1-206ENST00000483030 PRRC2BQ5JSZ5 2229 aaKnown RBP8.67□□□□□ -1.02
CSDE1-206ENST00000483030 TMEM31Q5JXX7 168 aa8.67□□□□□ -1.02
CSDE1-206ENST00000483030 GDF6Q6KF10 455 aaPredicted RBP8.67□□□□□ -1.02
CSDE1-206ENST00000483030 CCDC62Q6P9F0 684 aa8.67□□□□□ -1.02
CSDE1-206ENST00000483030 SEPT14Q6ZU15 432 aa8.67□□□□□ -1.02
CSDE1-206ENST00000483030 CHST3Q7LGC8 479 aa8.67□□□□□ -1.02
CSDE1-206ENST00000483030 CCDC155Q8N6L0 562 aa8.67□□□□□ -1.02
CSDE1-206ENST00000483030 CAGE1Q8TC20 777 aa8.67□□□□□ -1.02
CSDE1-206ENST00000483030 AFAP1L1Q8TED9 768 aa8.67□□□□□ -1.02
CSDE1-206ENST00000483030 TBC1D5Q92609 795 aa8.67□□□□□ -1.02
CSDE1-206ENST00000483030 KAT2BQ92831 832 aa8.67□□□□□ -1.02
CSDE1-206ENST00000483030 KHSRPQ92945 711 aaKnown RBP eCLIP8.67□□□□□ -1.022e-8■■■■□ 26.7
CSDE1-206ENST00000483030 EVI5LQ96CN4 794 aa8.67□□□□□ -1.02
CSDE1-206ENST00000483030 FAM227BQ96M60 508 aa8.67□□□□□ -1.02
CSDE1-206ENST00000483030 TTC14Q96N46 770 aa8.67□□□□□ -1.02
CSDE1-206ENST00000483030 TAAR1Q96RJ0 339 aa8.67□□□□□ -1.02
CSDE1-206ENST00000483030 CTAGE1Q96RT6 745 aa8.67□□□□□ -1.02
CSDE1-206ENST00000483030 UBA5Q9GZZ9 404 aa8.67□□□□□ -1.02
CSDE1-206ENST00000483030 CPVLQ9H3G5 476 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms