RNA–Protein interactions for RNA: ENST00000482632.5

SPTLC1-206, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 837 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-206ENST00000482632 RBM28Q9NW13 759 aaKnown RBP11.57□□□□□ -0.56
SPTLC1-206ENST00000482632 PCDHA1Q9Y5I3 950 aa11.57□□□□□ -0.56
SPTLC1-206ENST00000482632 PNMA6FA0A0J9YX94 578 aa11.56□□□□□ -0.56
SPTLC1-206ENST00000482632 ASB14A6NK59 587 aa11.56□□□□□ -0.56
SPTLC1-206ENST00000482632 LRRC37A2A6NM11 1700 aa11.56□□□□□ -0.56
SPTLC1-206ENST00000482632 CYTH3O43739 400 aa11.56□□□□□ -0.56
SPTLC1-206ENST00000482632 FARP2O94887 1054 aaPredicted RBP11.56□□□□□ -0.56
SPTLC1-206ENST00000482632 MAP3K21Q5TCX8 1036 aa11.56□□□□□ -0.56
SPTLC1-206ENST00000482632 EEPD1Q7L9B9 569 aa11.56□□□□□ -0.56
SPTLC1-206ENST00000482632 MCF2L2Q86YR7 1114 aa11.56□□□□□ -0.56
SPTLC1-206ENST00000482632 SRBD1Q8N5C6 995 aaKnown RBP11.56□□□□□ -0.56
SPTLC1-206ENST00000482632 FAM133AQ8N9E0 248 aa11.56□□□□□ -0.56
SPTLC1-206ENST00000482632 TRPV1Q8NER1 839 aa11.56□□□□□ -0.56
SPTLC1-206ENST00000482632 SHISA4Q96DD7 197 aa11.56□□□□□ -0.56
SPTLC1-206ENST00000482632 SPZ1Q9BXG8 430 aa11.56□□□□□ -0.56
SPTLC1-206ENST00000482632 RIOX1Q9H6W3 641 aa11.56□□□□□ -0.56
SPTLC1-206ENST00000482632 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.56□□□□□ -0.56
SPTLC1-206ENST00000482632 ADD3Q9UEY8 706 aaKnown RBP11.56□□□□□ -0.56
SPTLC1-206ENST00000482632 DDX20Q9UHI6 824 aaKnown RBP11.56□□□□□ -0.56
SPTLC1-206ENST00000482632 DDX49Q9Y6V7 483 aaKnown RBP11.56□□□□□ -0.56
SPTLC1-206ENST00000482632 SYNGAP1Q96PV0 1343 aa11.56□□□□□ -0.56
SPTLC1-206ENST00000482632 BRCA2P51587 3418 aa11.56□□□□□ -0.56
SPTLC1-206ENST00000482632 SOWAHBA6NEL2 793 aa11.55□□□□□ -0.56
SPTLC1-206ENST00000482632 PPP1R11O60927 126 aaPredicted RBP11.55□□□□□ -0.56
SPTLC1-206ENST00000482632 FXR1P51114 621 aaKnown RBP eCLIP11.55□□□□□ -0.56
SPTLC1-206ENST00000482632 ALDH5A1P51649 535 aaPredicted RBP11.55□□□□□ -0.56
SPTLC1-206ENST00000482632 RPS6P62753 249 aaKnown RBP11.55□□□□□ -0.56
SPTLC1-206ENST00000482632 CCT2P78371 535 aaKnown RBP11.55□□□□□ -0.56
SPTLC1-206ENST00000482632 PDE4DQ08499 809 aa11.55□□□□□ -0.56
SPTLC1-206ENST00000482632 TRAF1Q13077 416 aa11.55□□□□□ -0.56
SPTLC1-206ENST00000482632 STK3Q13188 491 aa11.55□□□□□ -0.56
SPTLC1-206ENST00000482632 SLC35G1Q2M3R5 365 aa11.55□□□□□ -0.56
SPTLC1-206ENST00000482632 C8orf34Q49A92 452 aa11.55□□□□□ -0.56
SPTLC1-206ENST00000482632 SMYD5Q6GMV2 418 aa11.55□□□□□ -0.56
SPTLC1-206ENST00000482632 TMTC3Q6ZXV5 915 aa11.55□□□□□ -0.56
SPTLC1-206ENST00000482632 HEATR3Q7Z4Q2 680 aa11.55□□□□□ -0.56
SPTLC1-206ENST00000482632 TBC1D5Q92609 795 aa11.55□□□□□ -0.56
SPTLC1-206ENST00000482632 MPHOSPH6Q99547 160 aaKnown RBP11.55□□□□□ -0.56
SPTLC1-206ENST00000482632 ZSWIM6Q9HCJ5 1215 aa11.55□□□□□ -0.56
SPTLC1-206ENST00000482632 SEPT4O43236 478 aa11.54□□□□□ -0.56
SPTLC1-206ENST00000482632 MSCO60682 206 aa11.54□□□□□ -0.56
SPTLC1-206ENST00000482632 PPFIA3O75145 1194 aa11.54□□□□□ -0.56
SPTLC1-206ENST00000482632 SNAI1O95863 264 aaPredicted RBP11.54□□□□□ -0.56
SPTLC1-206ENST00000482632 RARBP10826 455 aa11.54□□□□□ -0.56
SPTLC1-206ENST00000482632 CDC27P30260 824 aa11.54□□□□□ -0.56
SPTLC1-206ENST00000482632 HOXA13P31271 388 aaPredicted RBP11.54□□□□□ -0.56
SPTLC1-206ENST00000482632 AKAP17AQ02040 695 aaKnown RBP11.54□□□□□ -0.56
SPTLC1-206ENST00000482632 ACVR2BQ13705 512 aa11.54□□□□□ -0.56
SPTLC1-206ENST00000482632 FCHSD1Q86WN1 690 aa11.54□□□□□ -0.56
SPTLC1-206ENST00000482632 FBXO16Q8IX29 292 aaPredicted RBP11.54□□□□□ -0.56
SPTLC1-206ENST00000482632 MSL3Q8N5Y2 521 aaKnown RBP11.54□□□□□ -0.56
SPTLC1-206ENST00000482632 DIS3LQ8TF46 1054 aaKnown RBP11.54□□□□□ -0.56
SPTLC1-206ENST00000482632 GPKOWQ92917 476 aaPredicted RBP eCLIP11.54□□□□□ -0.56
SPTLC1-206ENST00000482632 CUL5Q93034 780 aa11.54□□□□□ -0.56
SPTLC1-206ENST00000482632 LENG1Q96BZ8 264 aaPredicted RBP11.54□□□□□ -0.56
SPTLC1-206ENST00000482632 MTMR8Q96EF0 704 aa11.54□□□□□ -0.56
SPTLC1-206ENST00000482632 FGD4Q96M96 766 aa11.54□□□□□ -0.56
SPTLC1-206ENST00000482632 TM6SF1Q9BZW5 370 aa11.54□□□□□ -0.56
SPTLC1-206ENST00000482632 CNTNAP5Q8WYK1 1306 aa11.54□□□□□ -0.56
SPTLC1-206ENST00000482632 KIAA1217Q5T5P2 1943 aa11.53□□□□□ -0.56
SPTLC1-206ENST00000482632 CCDC196A0A1B0GTZ2 297 aa11.53□□□□□ -0.56
SPTLC1-206ENST00000482632 B4DLN1 442 aa11.53□□□□□ -0.56
SPTLC1-206ENST00000482632 KBTBD13C9JR72 458 aa11.53□□□□□ -0.56
SPTLC1-206ENST00000482632 GCOM1H8Y6P7 765 aaPredicted RBP11.53□□□□□ -0.56
SPTLC1-206ENST00000482632 POLR2MP0CAP2 368 aa11.53□□□□□ -0.56
SPTLC1-206ENST00000482632 AKR1A1P14550 325 aa11.53□□□□□ -0.56
SPTLC1-206ENST00000482632 EIF2AK2P19525 551 aaKnown RBP11.53□□□□□ -0.56
SPTLC1-206ENST00000482632 MRPL12P52815 198 aaKnown RBP11.53□□□□□ -0.56
SPTLC1-206ENST00000482632 ANAPC15P60006 121 aa11.53□□□□□ -0.56
SPTLC1-206ENST00000482632 TOB2Q14106 344 aaPredicted RBP11.53□□□□□ -0.56
SPTLC1-206ENST00000482632 GJC2Q5T442 439 aaPredicted RBP11.53□□□□□ -0.56
SPTLC1-206ENST00000482632 ARHGEF16Q5VV41 709 aa11.53□□□□□ -0.56
SPTLC1-206ENST00000482632 MAMDC4Q6UXC1 1216 aa11.53□□□□□ -0.56
SPTLC1-206ENST00000482632 SMARCC2Q8TAQ2 1214 aa11.53□□□□□ -0.56
SPTLC1-206ENST00000482632 PAWRQ96IZ0 340 aaKnown RBP11.53□□□□□ -0.56
SPTLC1-206ENST00000482632 TAAR1Q96RJ0 339 aa11.53□□□□□ -0.56
SPTLC1-206ENST00000482632 ABHD16BQ9H3Z7 469 aa11.53□□□□□ -0.56
SPTLC1-206ENST00000482632 UPF2Q9HAU5 1272 aaKnown RBP11.53□□□□□ -0.56
SPTLC1-206ENST00000482632 NCOA5Q9HCD5 579 aaKnown RBP11.53□□□□□ -0.56
SPTLC1-206ENST00000482632 NRBP1Q9UHY1 535 aa11.53□□□□□ -0.56
SPTLC1-206ENST00000482632 FAM184BQ9ULE4 1060 aa11.53□□□□□ -0.56
SPTLC1-206ENST00000482632 MYH7BA7E2Y1 1941 aa11.52□□□□□ -0.56
SPTLC1-206ENST00000482632 COL6A3P12111 3177 aa11.52□□□□□ -0.57
SPTLC1-206ENST00000482632 DLL1O00548 723 aa11.52□□□□□ -0.57
SPTLC1-206ENST00000482632 CPLX1O14810 134 aa11.52□□□□□ -0.57
SPTLC1-206ENST00000482632 ZNF865P0CJ78 1059 aaPredicted RBP11.52□□□□□ -0.57
SPTLC1-206ENST00000482632 MYCLP12524 364 aaPredicted RBP11.52□□□□□ -0.57
SPTLC1-206ENST00000482632 SMARCA1P28370 1054 aa11.52□□□□□ -0.57
SPTLC1-206ENST00000482632 ADD1P35611 737 aaKnown RBP11.52□□□□□ -0.57
SPTLC1-206ENST00000482632 NAPAP54920 295 aa11.52□□□□□ -0.57
SPTLC1-206ENST00000482632 CCDC144BQ3MJ40 725 aa11.52□□□□□ -0.57
SPTLC1-206ENST00000482632 NECAB2Q7Z6G3 386 aa11.52□□□□□ -0.57
SPTLC1-206ENST00000482632 DNERQ8NFT8 737 aa11.52□□□□□ -0.57
SPTLC1-206ENST00000482632 OXER1Q8TDS5 423 aa11.52□□□□□ -0.57
SPTLC1-206ENST00000482632 SYTL5Q8TDW5 730 aaPredicted RBP11.52□□□□□ -0.57
SPTLC1-206ENST00000482632 RMDN3Q96TC7 470 aa11.52□□□□□ -0.57
SPTLC1-206ENST00000482632 XPNPEP3Q9NQH7 507 aa11.52□□□□□ -0.57
SPTLC1-206ENST00000482632 OGDHLQ9ULD0 1010 aa11.52□□□□□ -0.57
SPTLC1-206ENST00000482632 V9GY48 417 aaPredicted RBP11.52□□□□□ -0.57
SPTLC1-206ENST00000482632 ASTN1O14525 1302 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms