RNA–Protein interactions for RNA: ENST00000482478.5

COL16A1-212, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 3

Gene COL16A1, Length 797 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-212ENST00000482478 ARVCFO00192 962 aa18.18■□□□□ 0.5
COL16A1-212ENST00000482478 MYL3P08590 195 aa18.18■□□□□ 0.5
COL16A1-212ENST00000482478 RXRAP19793 462 aa18.18■□□□□ 0.5
COL16A1-212ENST00000482478 SEPT14Q6ZU15 432 aa18.18■□□□□ 0.5
COL16A1-212ENST00000482478 MICU3Q86XE3 530 aa18.18■□□□□ 0.5
COL16A1-212ENST00000482478 RAB11FIP4Q86YS3 637 aa18.18■□□□□ 0.5
COL16A1-212ENST00000482478 IGDCC4Q8TDY8 1250 aa18.18■□□□□ 0.5
COL16A1-212ENST00000482478 TBC1D5Q92609 795 aa18.18■□□□□ 0.5
COL16A1-212ENST00000482478 MTMR8Q96EF0 704 aa18.18■□□□□ 0.5
COL16A1-212ENST00000482478 TOX2Q96NM4 488 aa18.18■□□□□ 0.5
COL16A1-212ENST00000482478 TAAR1Q96RJ0 339 aa18.18■□□□□ 0.5
COL16A1-212ENST00000482478 MTA3Q9BTC8 594 aa18.18■□□□□ 0.5
COL16A1-212ENST00000482478 SZT2Q5T011 3432 aa18.17■□□□□ 0.5
COL16A1-212ENST00000482478 KIAA0355O15063 1070 aa18.17■□□□□ 0.5
COL16A1-212ENST00000482478 NKRFO15226 690 aaKnown RBP eCLIP18.17■□□□□ 0.5
COL16A1-212ENST00000482478 CYTH3O43739 400 aa18.17■□□□□ 0.5
COL16A1-212ENST00000482478 TXNP10599 105 aaKnown RBP18.17■□□□□ 0.5
COL16A1-212ENST00000482478 HOXA13P31271 388 aaPredicted RBP18.17■□□□□ 0.5
COL16A1-212ENST00000482478 PSMC6P62333 389 aa18.17■□□□□ 0.5
COL16A1-212ENST00000482478 NKX3-2P78367 333 aa18.17■□□□□ 0.5
COL16A1-212ENST00000482478 FPGSQ05932 587 aa18.17■□□□□ 0.5
COL16A1-212ENST00000482478 FAAP100Q0VG06 881 aa18.17■□□□□ 0.5
COL16A1-212ENST00000482478 NECTIN1Q15223 517 aa18.17■□□□□ 0.5
COL16A1-212ENST00000482478 SLC35G1Q2M3R5 365 aa18.17■□□□□ 0.5
COL16A1-212ENST00000482478 LRIT3Q3SXY7 679 aa18.17■□□□□ 0.5
COL16A1-212ENST00000482478 RRP36Q96EU6 259 aaKnown RBP18.17■□□□□ 0.5
COL16A1-212ENST00000482478 RIOX1Q9H6W3 641 aa18.17■□□□□ 0.5
COL16A1-212ENST00000482478 PXMP2Q9NR77 195 aa18.17■□□□□ 0.5
COL16A1-212ENST00000482478 POLR3EQ9NVU0 708 aa18.17■□□□□ 0.5
COL16A1-212ENST00000482478 SLC12A7Q9Y666 1083 aa18.17■□□□□ 0.5
COL16A1-212ENST00000482478 PNMA6FA0A0J9YX94 578 aa18.16■□□□□ 0.5
COL16A1-212ENST00000482478 RBM47A0AV96 593 aaKnown RBP18.16■□□□□ 0.5
COL16A1-212ENST00000482478 HSD17B4P51659 736 aa18.16■□□□□ 0.5
COL16A1-212ENST00000482478 STXBP2Q15833 593 aa18.16■□□□□ 0.5
COL16A1-212ENST00000482478 FAM126BQ8IXS8 530 aa18.16■□□□□ 0.5
COL16A1-212ENST00000482478 COPS5Q92905 334 aa18.16■□□□□ 0.5
COL16A1-212ENST00000482478 PPP1R12CQ9BZL4 782 aa18.16■□□□□ 0.5
COL16A1-212ENST00000482478 TBX21Q9UL17 535 aa18.16■□□□□ 0.5
COL16A1-212ENST00000482478 GCOM1H8Y6P7 765 aaPredicted RBP18.15■□□□□ 0.5
COL16A1-212ENST00000482478 OPLAHO14841 1288 aa18.15■□□□□ 0.5
COL16A1-212ENST00000482478 ARIH2O95376 493 aa18.15■□□□□ 0.5
COL16A1-212ENST00000482478 PLEKHA8P1O95397 391 aa18.15■□□□□ 0.5
COL16A1-212ENST00000482478 POLR2MP0CAP2 368 aa18.15■□□□□ 0.5
COL16A1-212ENST00000482478 CALM1P0DP23 149 aa18.15■□□□□ 0.5
COL16A1-212ENST00000482478 CALM2P0DP24 149 aa18.15■□□□□ 0.5
COL16A1-212ENST00000482478 CALM3P0DP25 149 aa18.15■□□□□ 0.5
COL16A1-212ENST00000482478 MYCLP12524 364 aaPredicted RBP18.15■□□□□ 0.5
COL16A1-212ENST00000482478 ITGB8P26012 769 aa18.15■□□□□ 0.5
COL16A1-212ENST00000482478 ITGA7Q13683 1181 aa18.15■□□□□ 0.5
COL16A1-212ENST00000482478 IWS1Q96ST2 819 aa18.15■□□□□ 0.5
COL16A1-212ENST00000482478 SPZ1Q9BXG8 430 aa18.15■□□□□ 0.5
COL16A1-212ENST00000482478 MRVI1Q9Y6F6 885 aa18.15■□□□□ 0.5
COL16A1-212ENST00000482478 GNAQP50148 359 aa18.14■□□□□ 0.49
COL16A1-212ENST00000482478 CHMP4BP1P59074 171 aa18.14■□□□□ 0.49
COL16A1-212ENST00000482478 COL9A3Q14050 684 aaPredicted RBP18.14■□□□□ 0.49
COL16A1-212ENST00000482478 KRT32Q14532 448 aa18.14■□□□□ 0.49
COL16A1-212ENST00000482478 FAM47CQ5HY64 1035 aa18.14■□□□□ 0.49
COL16A1-212ENST00000482478 C9orf50Q5SZB4 431 aa18.14■□□□□ 0.49
COL16A1-212ENST00000482478 SYNE3Q6ZMZ3 975 aa18.14■□□□□ 0.49
COL16A1-212ENST00000482478 FCHSD1Q86WN1 690 aa18.14■□□□□ 0.49
COL16A1-212ENST00000482478 TMTC2Q8N394 836 aa18.14■□□□□ 0.49
COL16A1-212ENST00000482478 RNPC3Q96LT9 517 aaKnown RBP18.14■□□□□ 0.49
COL16A1-212ENST00000482478 TCEANC2Q96MN5 208 aa18.14■□□□□ 0.49
COL16A1-212ENST00000482478 NEK1Q96PY6 1258 aa18.14■□□□□ 0.49
COL16A1-212ENST00000482478 MAP3K14Q99558 947 aa18.14■□□□□ 0.49
COL16A1-212ENST00000482478 LZTS2Q9BRK4 669 aa18.14■□□□□ 0.49
COL16A1-212ENST00000482478 MTG1Q9BT17 334 aaPredicted RBP18.14■□□□□ 0.49
COL16A1-212ENST00000482478 GH1P01241 217 aa18.13■□□□□ 0.49
COL16A1-212ENST00000482478 LIFRP42702 1097 aa18.13■□□□□ 0.49
COL16A1-212ENST00000482478 FGD1P98174 961 aa18.13■□□□□ 0.49
COL16A1-212ENST00000482478 PURAQ00577 322 aaKnown RBP18.13■□□□□ 0.49
COL16A1-212ENST00000482478 GHRHRQ02643 423 aa18.13■□□□□ 0.49
COL16A1-212ENST00000482478 PDCD2LQ9BRP1 358 aa18.13■□□□□ 0.49
COL16A1-212ENST00000482478 NAP1L2Q9ULW6 460 aaPredicted RBP18.13■□□□□ 0.49
COL16A1-212ENST00000482478 TIMP1P01033 207 aa18.12■□□□□ 0.49
COL16A1-212ENST00000482478 NR3C2P08235 984 aa18.12■□□□□ 0.49
COL16A1-212ENST00000482478 CCND2P30279 289 aa18.12■□□□□ 0.49
COL16A1-212ENST00000482478 CDK7P50613 346 aa18.12■□□□□ 0.49
COL16A1-212ENST00000482478 PGM5Q15124 567 aa18.12■□□□□ 0.49
COL16A1-212ENST00000482478 SHHQ15465 462 aa18.12■□□□□ 0.49
COL16A1-212ENST00000482478 LY6KQ17RY6 165 aa18.12■□□□□ 0.49
COL16A1-212ENST00000482478 CMTR1Q8N1G2 835 aaKnown RBP18.12■□□□□ 0.49
COL16A1-212ENST00000482478 SMARCC2Q8TAQ2 1214 aa18.12■□□□□ 0.49
COL16A1-212ENST00000482478 CUL5Q93034 780 aa18.12■□□□□ 0.49
COL16A1-212ENST00000482478 SEZ6LQ9BYH1 1024 aa18.12■□□□□ 0.49
COL16A1-212ENST00000482478 MAP3K20Q9NYL2 800 aaKnown RBP18.12■□□□□ 0.49
COL16A1-212ENST00000482478 BAZ2BQ9UIF8 2168 aaKnown RBP18.11■□□□□ 0.49
COL16A1-212ENST00000482478 B4GALT4O60513 344 aa18.11■□□□□ 0.49
COL16A1-212ENST00000482478 EIF3JO75822 258 aaKnown RBP18.11■□□□□ 0.49
COL16A1-212ENST00000482478 MMP3P08254 477 aa18.11■□□□□ 0.49
COL16A1-212ENST00000482478 TMTC3Q6ZXV5 915 aa18.11■□□□□ 0.49
COL16A1-212ENST00000482478 TMEM199Q8N511 208 aa18.11■□□□□ 0.49
COL16A1-212ENST00000482478 IL31RAQ8NI17 732 aa18.11■□□□□ 0.49
COL16A1-212ENST00000482478 AFG1LQ8WV93 481 aa18.11■□□□□ 0.49
COL16A1-212ENST00000482478 HIPK3Q9H422 1215 aa18.11■□□□□ 0.49
COL16A1-212ENST00000482478 KIAA1217Q5T5P2 1943 aa18.11■□□□□ 0.49
COL16A1-212ENST00000482478 REC8O95072 547 aa18.1■□□□□ 0.49
COL16A1-212ENST00000482478 ARHGAP1Q07960 439 aa18.1■□□□□ 0.49
COL16A1-212ENST00000482478 PPIGQ13427 754 aaKnown RBP eCLIP18.1■□□□□ 0.491e-7■■■■□ 20.6
COL16A1-212ENST00000482478 ADCK5Q3MIX3 580 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms