RNA–Protein interactions for RNA: ENST00000482195.5

DDX39B-220, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 1,232 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-220ENST00000482195 SLC43A3Q8NBI5 491 aa12.19□□□□□ -0.46
DDX39B-220ENST00000482195 ASB2Q96Q27 587 aa12.19□□□□□ -0.46
DDX39B-220ENST00000482195 PURBQ96QR8 312 aaKnown RBP12.19□□□□□ -0.46
DDX39B-220ENST00000482195 UHRF1Q96T88 793 aaPredicted RBP12.19□□□□□ -0.46
DDX39B-220ENST00000482195 WNT8AQ9H1J5 351 aa12.19□□□□□ -0.46
DDX39B-220ENST00000482195 KDM4CQ9H3R0 1056 aa12.19□□□□□ -0.46
DDX39B-220ENST00000482195 VTA1Q9NP79 307 aa12.19□□□□□ -0.46
DDX39B-220ENST00000482195 CYP39A1Q9NYL5 469 aa12.19□□□□□ -0.46
DDX39B-220ENST00000482195 PRR12Q9ULL5 1215 aa12.19□□□□□ -0.46
DDX39B-220ENST00000482195 PRRC2BQ5JSZ5 2229 aaKnown RBP12.19□□□□□ -0.46
DDX39B-220ENST00000482195 TRIP12Q14669 1992 aaPredicted RBP12.19□□□□□ -0.46
DDX39B-220ENST00000482195 TTC41PQ6P2S7 1318 aa12.18□□□□□ -0.46
DDX39B-220ENST00000482195 SCN10AQ9Y5Y9 1956 aa12.18□□□□□ -0.46
DDX39B-220ENST00000482195 FAM47CQ5HY64 1035 aa12.18□□□□□ -0.46
DDX39B-220ENST00000482195 TMEM63BQ5T3F8 832 aa12.18□□□□□ -0.46
DDX39B-220ENST00000482195 IQSEC1Q6DN90 963 aa12.18□□□□□ -0.46
DDX39B-220ENST00000482195 RCSD1Q6JBY9 416 aa12.18□□□□□ -0.46
DDX39B-220ENST00000482195 DEFB128Q7Z7B8 93 aa12.18□□□□□ -0.46
DDX39B-220ENST00000482195 OR6J1Q8NGC5 347 aa12.18□□□□□ -0.46
DDX39B-220ENST00000482195 DCTPP1Q9H773 170 aa12.18□□□□□ -0.46
DDX39B-220ENST00000482195 TRMT13Q9NUP7 481 aaKnown RBP12.18□□□□□ -0.46
DDX39B-220ENST00000482195 COL4A4P53420 1690 aaPredicted RBP12.18□□□□□ -0.46
DDX39B-220ENST00000482195 CHD7Q9P2D1 2997 aa12.18□□□□□ -0.46
DDX39B-220ENST00000482195 GRIN2DO15399 1336 aa12.17□□□□□ -0.46
DDX39B-220ENST00000482195 TNKSO95271 1327 aa12.17□□□□□ -0.46
DDX39B-220ENST00000482195 FRMPD2Q68DX3 1309 aaPredicted RBP12.17□□□□□ -0.46
DDX39B-220ENST00000482195 CYP2C9P11712 490 aa12.17□□□□□ -0.46
DDX39B-220ENST00000482195 ATP2A2P16615 1042 aaKnown RBP12.17□□□□□ -0.46
DDX39B-220ENST00000482195 CALML3P27482 149 aa12.17□□□□□ -0.46
DDX39B-220ENST00000482195 SLC16A2P36021 539 aa12.17□□□□□ -0.46
DDX39B-220ENST00000482195 ALDH5A1P51649 535 aaPredicted RBP12.17□□□□□ -0.46
DDX39B-220ENST00000482195 CHMP4BP1P59074 171 aa12.17□□□□□ -0.46
DDX39B-220ENST00000482195 NKX3-2P78367 333 aa12.17□□□□□ -0.46
DDX39B-220ENST00000482195 RRP12Q5JTH9 1297 aaKnown RBP12.17□□□□□ -0.46
DDX39B-220ENST00000482195 ZMYM1Q5SVZ6 1142 aa12.17□□□□□ -0.46
DDX39B-220ENST00000482195 TAPT1Q6NXT6 567 aa12.17□□□□□ -0.46
DDX39B-220ENST00000482195 OTUD7AQ8TE49 926 aaPredicted RBP12.17□□□□□ -0.46
DDX39B-220ENST00000482195 DCAF4Q8WV16 495 aa12.17□□□□□ -0.46
DDX39B-220ENST00000482195 SEZ6LQ9BYH1 1024 aa12.17□□□□□ -0.46
DDX39B-220ENST00000482195 WDR11Q9BZH6 1224 aa12.17□□□□□ -0.46
DDX39B-220ENST00000482195 ALDH8A1Q9H2A2 487 aaPredicted RBP12.17□□□□□ -0.46
DDX39B-220ENST00000482195 INCENPQ9NQS7 918 aa12.17□□□□□ -0.46
DDX39B-220ENST00000482195 POLR3EQ9NVU0 708 aa12.17□□□□□ -0.46
DDX39B-220ENST00000482195 ADD3Q9UEY8 706 aaKnown RBP12.17□□□□□ -0.46
DDX39B-220ENST00000482195 RAPGEFL1Q9UHV5 662 aa12.17□□□□□ -0.46
DDX39B-220ENST00000482195 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.17□□□□□ -0.46
DDX39B-220ENST00000482195 RAD50Q92878 1312 aa12.16□□□□□ -0.46
DDX39B-220ENST00000482195 PTPRSQ13332 1948 aa12.16□□□□□ -0.46
DDX39B-220ENST00000482195 PLA2G6O60733 806 aa12.16□□□□□ -0.46
DDX39B-220ENST00000482195 ICAM1P05362 532 aa12.16□□□□□ -0.46
DDX39B-220ENST00000482195 CPT1AP50416 773 aa12.16□□□□□ -0.46
DDX39B-220ENST00000482195 BAATQ14032 418 aaPredicted RBP12.16□□□□□ -0.46
DDX39B-220ENST00000482195 TTLL4Q14679 1199 aa12.16□□□□□ -0.46
DDX39B-220ENST00000482195 DUSP28Q4G0W2 176 aa12.16□□□□□ -0.46
DDX39B-220ENST00000482195 BRDTQ58F21 947 aaPredicted RBP12.16□□□□□ -0.46
DDX39B-220ENST00000482195 SYDE2Q5VT97 1194 aa12.16□□□□□ -0.46
DDX39B-220ENST00000482195 TTBK2Q6IQ55 1244 aa12.16□□□□□ -0.46
DDX39B-220ENST00000482195 SLC30A10Q6XR72 485 aa12.16□□□□□ -0.46
DDX39B-220ENST00000482195 PI4K2BQ8TCG2 481 aa12.16□□□□□ -0.46
DDX39B-220ENST00000482195 PPP1R13LQ8WUF5 828 aa12.16□□□□□ -0.46
DDX39B-220ENST00000482195 DDX12PQ92771 950 aa12.16□□□□□ -0.46
DDX39B-220ENST00000482195 DCBLD2Q96PD2 775 aa12.16□□□□□ -0.46
DDX39B-220ENST00000482195 CERS4Q9HA82 394 aa12.16□□□□□ -0.46
DDX39B-220ENST00000482195 GPCPD1Q9NPB8 672 aa12.16□□□□□ -0.46
DDX39B-220ENST00000482195 IL17RBQ9NRM6 502 aa12.16□□□□□ -0.46
DDX39B-220ENST00000482195 Q9Y3F1 56 aa12.16□□□□□ -0.46
DDX39B-220ENST00000482195 PCDHA11Q9Y5I1 949 aa12.16□□□□□ -0.46
DDX39B-220ENST00000482195 BDP1A6H8Y1 2624 aa12.16□□□□□ -0.46
DDX39B-220ENST00000482195 TET1Q8NFU7 2136 aa12.16□□□□□ -0.46
DDX39B-220ENST00000482195 NFIBO00712 420 aa12.15□□□□□ -0.46
DDX39B-220ENST00000482195 CA3P07451 260 aa12.15□□□□□ -0.46
DDX39B-220ENST00000482195 PFKMP08237 780 aa12.15□□□□□ -0.46
DDX39B-220ENST00000482195 SUPT20HL2P0C7V6 817 aa12.15□□□□□ -0.46
DDX39B-220ENST00000482195 ACTN1P12814 892 aa12.15□□□□□ -0.46
DDX39B-220ENST00000482195 MX1P20591 662 aa12.15□□□□□ -0.46
DDX39B-220ENST00000482195 PPP2R5BQ15173 497 aa12.15□□□□□ -0.46
DDX39B-220ENST00000482195 TMEM67Q5HYA8 995 aa12.15□□□□□ -0.46
DDX39B-220ENST00000482195 SLC39A7Q92504 469 aa12.15□□□□□ -0.46
DDX39B-220ENST00000482195 NECAB3Q96P71 396 aaPredicted RBP12.15□□□□□ -0.46
DDX39B-220ENST00000482195 MPHOSPH6Q99547 160 aaKnown RBP12.15□□□□□ -0.46
DDX39B-220ENST00000482195 MTG1Q9BT17 334 aaPredicted RBP12.15□□□□□ -0.46
DDX39B-220ENST00000482195 FTOQ9C0B1 505 aaKnown RBP eCLIP12.15□□□□□ -0.46
DDX39B-220ENST00000482195 RANBP17Q9H2T7 1088 aaKnown RBP12.15□□□□□ -0.46
DDX39B-220ENST00000482195 NOD1Q9Y239 953 aa12.15□□□□□ -0.46
DDX39B-220ENST00000482195 KIAA1217Q5T5P2 1943 aa12.14□□□□□ -0.47
DDX39B-220ENST00000482195 PURAQ00577 322 aaKnown RBP12.14□□□□□ -0.47
DDX39B-220ENST00000482195 TFF2Q03403 129 aa12.14□□□□□ -0.47
DDX39B-220ENST00000482195 VPS53Q5VIR6 699 aa12.14□□□□□ -0.47
DDX39B-220ENST00000482195 RNF207Q6ZRF8 634 aa12.14□□□□□ -0.47
DDX39B-220ENST00000482195 RETREG2Q8NC44 543 aa12.14□□□□□ -0.47
DDX39B-220ENST00000482195 REV3LO60673 3130 aa12.14□□□□□ -0.47
DDX39B-220ENST00000482195 RFXAPO00287 272 aa12.13□□□□□ -0.47
DDX39B-220ENST00000482195 TOP1P11387 765 aaKnown RBP12.13□□□□□ -0.47
DDX39B-220ENST00000482195 NBPF20Q3BBV1 942 aa12.13□□□□□ -0.47
DDX39B-220ENST00000482195 MORC4Q8TE76 937 aa12.13□□□□□ -0.47
DDX39B-220ENST00000482195 PTCD2Q8WV60 388 aaKnown RBP12.13□□□□□ -0.47
DDX39B-220ENST00000482195 COPS5Q92905 334 aa12.13□□□□□ -0.47
DDX39B-220ENST00000482195 SLC9A7Q96T83 725 aa12.13□□□□□ -0.47
DDX39B-220ENST00000482195 DAXXQ9UER7 740 aaPredicted RBP12.13□□□□□ -0.47
DDX39B-220ENST00000482195 LAMA4Q16363 1823 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms