RNA–Protein interactions for RNA: ENST00000480484.5

COMMD4-203, Transcript of COMM domain containing 4, humanhuman

TSL 1 (best)

Gene COMMD4, Length 3,225 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-203ENST00000480484 UBAP1LF5GYI3 381 aa11.27□□□□□ -0.61
COMMD4-203ENST00000480484 EIF3HO15372 352 aaKnown RBP eCLIP11.27□□□□□ -0.61
COMMD4-203ENST00000480484 SHOX2O60902 331 aaPredicted RBP11.27□□□□□ -0.61
COMMD4-203ENST00000480484 MBD4O95243 580 aa11.27□□□□□ -0.61
COMMD4-203ENST00000480484 NDUFA10O95299 355 aa11.27□□□□□ -0.61
COMMD4-203ENST00000480484 PDCLQ13371 301 aa11.27□□□□□ -0.61
COMMD4-203ENST00000480484 PUM3Q15397 648 aaKnown RBP11.27□□□□□ -0.61
COMMD4-203ENST00000480484 SPATA5Q8NB90 893 aa11.27□□□□□ -0.61
COMMD4-203ENST00000480484 GIMAP7Q8NHV1 300 aa11.27□□□□□ -0.61
COMMD4-203ENST00000480484 AIDAQ96BJ3 306 aa11.27□□□□□ -0.61
COMMD4-203ENST00000480484 LAMB2P55268 1798 aa11.27□□□□□ -0.61
COMMD4-203ENST00000480484 TRIM49BA6NDI0 452 aa11.27□□□□□ -0.61
COMMD4-203ENST00000480484 KCNQ2O43526 872 aa11.27□□□□□ -0.61
COMMD4-203ENST00000480484 KLK7P49862 253 aa11.27□□□□□ -0.61
COMMD4-203ENST00000480484 KCTD16Q68DU8 428 aa11.27□□□□□ -0.61
COMMD4-203ENST00000480484 KANK3Q6NY19 840 aa11.27□□□□□ -0.61
COMMD4-203ENST00000480484 CCNI2Q6ZMN8 369 aaPredicted RBP11.27□□□□□ -0.61
COMMD4-203ENST00000480484 MARCH10Q8NA82 808 aaPredicted RBP11.27□□□□□ -0.61
COMMD4-203ENST00000480484 PRR7Q8TB68 274 aa11.27□□□□□ -0.61
COMMD4-203ENST00000480484 STRBPQ96SI9 672 aaKnown RBP11.27□□□□□ -0.61
COMMD4-203ENST00000480484 ARPC5LQ9BPX5 153 aa11.27□□□□□ -0.61
COMMD4-203ENST00000480484 TMUB1Q9BVT8 246 aa11.27□□□□□ -0.61
COMMD4-203ENST00000480484 QTRT2Q9H974 415 aaKnown RBP11.27□□□□□ -0.61
COMMD4-203ENST00000480484 CD248Q9HCU0 757 aa11.27□□□□□ -0.61
COMMD4-203ENST00000480484 DDX60Q8IY21 1712 aaKnown RBP11.26□□□□□ -0.61
COMMD4-203ENST00000480484 KIAA1551Q9HCM1 1747 aa11.26□□□□□ -0.61
COMMD4-203ENST00000480484 NUTM2BA6NNL0 878 aaPredicted RBP11.26□□□□□ -0.61
COMMD4-203ENST00000480484 NUTM2EB1AL46 878 aaPredicted RBP11.26□□□□□ -0.61
COMMD4-203ENST00000480484 ERVV-1B6SEH8 477 aa11.26□□□□□ -0.61
COMMD4-203ENST00000480484 ATP2B2Q01814 1243 aa11.26□□□□□ -0.61
COMMD4-203ENST00000480484 SDR42E1Q8WUS8 393 aa11.26□□□□□ -0.61
COMMD4-203ENST00000480484 LPIN2Q92539 896 aa11.26□□□□□ -0.61
COMMD4-203ENST00000480484 PSMB7Q99436 277 aa11.26□□□□□ -0.61
COMMD4-203ENST00000480484 CCDC87Q9NVE4 849 aa11.26□□□□□ -0.61
COMMD4-203ENST00000480484 UBR3Q6ZT12 1888 aa11.26□□□□□ -0.61
COMMD4-203ENST00000480484 CCDC196A0A1B0GTZ2 297 aa11.26□□□□□ -0.61
COMMD4-203ENST00000480484 MACROD2A1Z1Q3 448 aa11.26□□□□□ -0.61
COMMD4-203ENST00000480484 TNFRSF10BO14763 440 aa11.26□□□□□ -0.61
COMMD4-203ENST00000480484 RDXP35241 583 aaKnown RBP11.26□□□□□ -0.61
COMMD4-203ENST00000480484 TDO2P48775 406 aa11.26□□□□□ -0.61
COMMD4-203ENST00000480484 UBXN1Q04323 297 aa11.26□□□□□ -0.61
COMMD4-203ENST00000480484 PPARAQ07869 468 aa11.26□□□□□ -0.61
COMMD4-203ENST00000480484 MRPL58Q14197 206 aaKnown RBP11.26□□□□□ -0.61
COMMD4-203ENST00000480484 HIC1Q14526 733 aa11.26□□□□□ -0.61
COMMD4-203ENST00000480484 ADGRA1Q86SQ6 560 aa11.26□□□□□ -0.61
COMMD4-203ENST00000480484 CABS1Q96KC9 395 aa11.26□□□□□ -0.61
COMMD4-203ENST00000480484 DONSONQ9NYP3 566 aa11.26□□□□□ -0.61
COMMD4-203ENST00000480484 EHD2Q9NZN4 543 aa11.26□□□□□ -0.61
COMMD4-203ENST00000480484 REXO2Q9Y3B8 237 aaKnown RBP11.26□□□□□ -0.61
COMMD4-203ENST00000480484 ABCC12Q96J65 1359 aa11.26□□□□□ -0.61
COMMD4-203ENST00000480484 SCN7AQ01118 1682 aa11.26□□□□□ -0.61
COMMD4-203ENST00000480484 IFIT3O14879 490 aaKnown RBP11.26□□□□□ -0.61
COMMD4-203ENST00000480484 NMT2O60551 498 aa11.26□□□□□ -0.61
COMMD4-203ENST00000480484 CAMTA2O94983 1202 aa11.26□□□□□ -0.61
COMMD4-203ENST00000480484 SLC7A5Q01650 507 aa11.26□□□□□ -0.61
COMMD4-203ENST00000480484 CUL4BQ13620 913 aa11.26□□□□□ -0.61
COMMD4-203ENST00000480484 UBE3CQ15386 1083 aa11.26□□□□□ -0.61
COMMD4-203ENST00000480484 ZNF174Q15697 407 aa11.26□□□□□ -0.61
COMMD4-203ENST00000480484 EZH2Q15910 746 aaKnown RBP11.26□□□□□ -0.61
COMMD4-203ENST00000480484 CDKAL1Q5VV42 579 aa11.26□□□□□ -0.61
COMMD4-203ENST00000480484 RRAGBQ5VZM2 374 aa11.26□□□□□ -0.61
COMMD4-203ENST00000480484 CCDC70Q6NSX1 233 aa11.26□□□□□ -0.61
COMMD4-203ENST00000480484 C3orf67Q6ZVT6 689 aa11.26□□□□□ -0.61
COMMD4-203ENST00000480484 TSPAN18Q96SJ8 248 aa11.26□□□□□ -0.61
COMMD4-203ENST00000480484 BSDC1Q9NW68 430 aaPredicted RBP11.26□□□□□ -0.61
COMMD4-203ENST00000480484 PDE2AO00408 941 aaPredicted RBP11.25□□□□□ -0.61
COMMD4-203ENST00000480484 FAM163BP0C2L3 166 aa11.25□□□□□ -0.61
COMMD4-203ENST00000480484 IDEP14735 1019 aa11.25□□□□□ -0.61
COMMD4-203ENST00000480484 CKAP4Q07065 602 aaKnown RBP11.25□□□□□ -0.61
COMMD4-203ENST00000480484 TTF1Q15361 905 aaPredicted RBP11.25□□□□□ -0.61
COMMD4-203ENST00000480484 DDB1Q16531 1140 aa11.25□□□□□ -0.61
COMMD4-203ENST00000480484 C10orf62Q5T681 223 aaPredicted RBP11.25□□□□□ -0.61
COMMD4-203ENST00000480484 LCORLQ8N3X6 602 aa11.25□□□□□ -0.61
COMMD4-203ENST00000480484 SH2D3CQ8N5H7 860 aa11.25□□□□□ -0.61
COMMD4-203ENST00000480484 SMCR8Q8TEV9 937 aaPredicted RBP11.25□□□□□ -0.61
COMMD4-203ENST00000480484 MTRQ99707 1265 aa11.25□□□□□ -0.61
COMMD4-203ENST00000480484 NIP7Q9Y221 180 aaKnown RBP eCLIP11.25□□□□□ -0.61
COMMD4-203ENST00000480484 SLC12A7Q9Y666 1083 aa11.25□□□□□ -0.61
COMMD4-203ENST00000480484 GRIN2DO15399 1336 aa11.25□□□□□ -0.61
COMMD4-203ENST00000480484 MYH14Q7Z406 1995 aaKnown RBP11.25□□□□□ -0.61
COMMD4-203ENST00000480484 LOC102724428A0A0B4J2F2 783 aa11.25□□□□□ -0.61
COMMD4-203ENST00000480484 NDUFV2P19404 249 aa11.25□□□□□ -0.61
COMMD4-203ENST00000480484 COPB1P53618 953 aaKnown RBP11.25□□□□□ -0.61
COMMD4-203ENST00000480484 SIK1P57059 783 aa11.25□□□□□ -0.61
COMMD4-203ENST00000480484 ZNF211Q13398 564 aaPredicted RBP11.25□□□□□ -0.61
COMMD4-203ENST00000480484 UBE4AQ14139 1066 aa11.25□□□□□ -0.61
COMMD4-203ENST00000480484 HDAC7Q8WUI4 952 aa11.25□□□□□ -0.61
COMMD4-203ENST00000480484 ARL8AQ96BM9 186 aa11.25□□□□□ -0.61
COMMD4-203ENST00000480484 OSBPL2Q9H1P3 480 aa11.25□□□□□ -0.61
COMMD4-203ENST00000480484 RCCD1A6NED2 376 aa11.24□□□□□ -0.61
COMMD4-203ENST00000480484 PP2D1A8MPX8 630 aa11.24□□□□□ -0.61
COMMD4-203ENST00000480484 PSMD14O00487 310 aa11.24□□□□□ -0.61
COMMD4-203ENST00000480484 PLEKHA8P1O95397 391 aa11.24□□□□□ -0.61
COMMD4-203ENST00000480484 MMP1P03956 469 aa11.24□□□□□ -0.61
COMMD4-203ENST00000480484 CD53P19397 219 aa11.24□□□□□ -0.61
COMMD4-203ENST00000480484 VPS72Q15906 364 aa11.24□□□□□ -0.61
COMMD4-203ENST00000480484 RILPL1Q5EBL4 403 aa11.24□□□□□ -0.61
COMMD4-203ENST00000480484 PAGE5Q96GU1 130 aa11.24□□□□□ -0.61
COMMD4-203ENST00000480484 HAUS4Q9H6D7 363 aa11.24□□□□□ -0.61
COMMD4-203ENST00000480484 FAM184BQ9ULE4 1060 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms