RNA–Protein interactions for RNA: ENST00000480393.5

TNFRSF25-213, Transcript of TNF receptor superfamily member 25, humanhuman

TSL 1 (best)

Gene TNFRSF25, Length 1,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25-213ENST00000480393 CT47A1Q5JQC4 288 aaPredicted RBP31.32■■■□□ 2.61
TNFRSF25-213ENST00000480393 KRT79Q5XKE5 535 aa31.32■■■□□ 2.61
TNFRSF25-213ENST00000480393 FCHSD1Q86WN1 690 aa31.32■■■□□ 2.61
TNFRSF25-213ENST00000480393 CRYGNQ8WXF5 182 aa31.32■■■□□ 2.61
TNFRSF25-213ENST00000480393 MMTAG2Q9BU76 263 aaKnown RBP31.32■■■□□ 2.61
TNFRSF25-213ENST00000480393 EHMT1Q9H9B1 1298 aa31.32■■■□□ 2.61
TNFRSF25-213ENST00000480393 CCPG1Q9ULG6 757 aa31.32■■■□□ 2.61
TNFRSF25-213ENST00000480393 RPN1P04843 607 aaKnown RBP31.32■■■□□ 2.6
TNFRSF25-213ENST00000480393 ICAM1P05362 532 aa31.32■■■□□ 2.6
TNFRSF25-213ENST00000480393 ZKSCAN5Q9Y2L8 839 aa31.32■■■□□ 2.6
TNFRSF25-213ENST00000480393 DGKZQ13574 1117 aa31.31■■■□□ 2.6
TNFRSF25-213ENST00000480393 SLFN12Q8IYM2 578 aa31.31■■■□□ 2.6
TNFRSF25-213ENST00000480393 ZNF280CQ8ND82 737 aa31.31■■■□□ 2.6
TNFRSF25-213ENST00000480393 SNX29Q8TEQ0 813 aa31.31■■■□□ 2.6
TNFRSF25-213ENST00000480393 RRAGDQ9NQL2 400 aaPredicted RBP31.31■■■□□ 2.6
TNFRSF25-213ENST00000480393 EMILIN3Q9NT22 766 aa31.31■■■□□ 2.6
TNFRSF25-213ENST00000480393 KBTBD4Q9NVX7 518 aa31.31■■■□□ 2.6
TNFRSF25-213ENST00000480393 PCDHA12Q9UN75 941 aa31.31■■■□□ 2.6
TNFRSF25-213ENST00000480393 FZD1Q9UP38 647 aa31.31■■■□□ 2.6
TNFRSF25-213ENST00000480393 CTDP1Q9Y5B0 961 aaPredicted RBP31.31■■■□□ 2.6
TNFRSF25-213ENST00000480393 SSC5DA1L4H1 1573 aa31.31■■■□□ 2.6
TNFRSF25-213ENST00000480393 FLOT1O75955 427 aa31.3■■■□□ 2.6
TNFRSF25-213ENST00000480393 ERCC5P28715 1186 aaPredicted RBP31.3■■■□□ 2.6
TNFRSF25-213ENST00000480393 PRR16Q569H4 304 aa31.3■■■□□ 2.6
TNFRSF25-213ENST00000480393 RPAP3Q9H6T3 665 aaPredicted RBP31.3■■■□□ 2.6
TNFRSF25-213ENST00000480393 KCNMB3Q9NPA1 279 aa31.3■■■□□ 2.6
TNFRSF25-213ENST00000480393 ZNF76P36508 570 aa31.29■■■□□ 2.6
TNFRSF25-213ENST00000480393 BACE1P56817 501 aa31.29■■■□□ 2.6
TNFRSF25-213ENST00000480393 Q4G0T1 1027 aa31.29■■■□□ 2.6
TNFRSF25-213ENST00000480393 DCPSQ96C86 337 aaKnown RBP31.29■■■□□ 2.6
TNFRSF25-213ENST00000480393 KLRG1Q96E93 195 aa31.29■■■□□ 2.6
TNFRSF25-213ENST00000480393 STK17AQ9UEE5 414 aa31.29■■■□□ 2.6
TNFRSF25-213ENST00000480393 GRB10Q13322 594 aa31.29■■■□□ 2.6
TNFRSF25-213ENST00000480393 ENOX1Q8TC92 643 aaKnown RBP31.29■■■□□ 2.6
TNFRSF25-213ENST00000480393 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP31.29■■■□□ 2.6
TNFRSF25-213ENST00000480393 AMPD3Q01432 767 aa31.28■■■□□ 2.6
TNFRSF25-213ENST00000480393 FMR1Q06787 632 aaKnown RBP eCLIP31.28■■■□□ 2.6
TNFRSF25-213ENST00000480393 LRRC15Q8TF66 581 aa31.28■■■□□ 2.6
TNFRSF25-213ENST00000480393 GJA10Q969M2 543 aa31.28■■■□□ 2.6
TNFRSF25-213ENST00000480393 AGBL1Q96MI9 1066 aa31.28■■■□□ 2.6
TNFRSF25-213ENST00000480393 PPP1R9AQ9ULJ8 1098 aa31.28■■■□□ 2.6
TNFRSF25-213ENST00000480393 ZHX2Q9Y6X8 837 aa31.28■■■□□ 2.6
TNFRSF25-213ENST00000480393 TBX3O15119 743 aa31.27■■■□□ 2.6
TNFRSF25-213ENST00000480393 CYP3A4P08684 503 aa31.27■■■□□ 2.6
TNFRSF25-213ENST00000480393 CIITAP33076 1130 aa31.27■■■□□ 2.6
TNFRSF25-213ENST00000480393 TRMT44Q8IYL2 757 aaKnown RBP31.27■■■□□ 2.6
TNFRSF25-213ENST00000480393 RTN4Q9NQC3 1192 aaKnown RBP31.27■■■□□ 2.6
TNFRSF25-213ENST00000480393 FANCLQ9NW38 375 aa31.27■■■□□ 2.6
TNFRSF25-213ENST00000480393 SYNRGQ9UMZ2 1314 aa31.27■■■□□ 2.6
TNFRSF25-213ENST00000480393 NOL9Q5SY16 702 aaKnown RBP31.27■■■□□ 2.6
TNFRSF25-213ENST00000480393 KLHL10Q6JEL2 608 aa31.27■■■□□ 2.6
TNFRSF25-213ENST00000480393 SULF1Q8IWU6 871 aa31.27■■■□□ 2.6
TNFRSF25-213ENST00000480393 TBC1D5Q92609 795 aa31.27■■■□□ 2.6
TNFRSF25-213ENST00000480393 CCDC47Q96A33 483 aaKnown RBP31.27■■■□□ 2.6
TNFRSF25-213ENST00000480393 HSD3B7Q9H2F3 369 aa31.27■■■□□ 2.6
TNFRSF25-213ENST00000480393 IFNKQ9P0W0 207 aa31.27■■■□□ 2.6
TNFRSF25-213ENST00000480393 ZNF536O15090 1300 aa31.26■■■□□ 2.59
TNFRSF25-213ENST00000480393 FANCCQ00597 558 aa31.26■■■□□ 2.59
TNFRSF25-213ENST00000480393 PRKG1Q13976 671 aa31.26■■■□□ 2.59
TNFRSF25-213ENST00000480393 ZNF658Q5TYW1 1059 aaPredicted RBP31.26■■■□□ 2.59
TNFRSF25-213ENST00000480393 SMYD4Q8IYR2 804 aaPredicted RBP31.26■■■□□ 2.59
TNFRSF25-213ENST00000480393 PNMA5Q96PV4 448 aa31.26■■■□□ 2.59
TNFRSF25-213ENST00000480393 SLC38A10Q9HBR0 1119 aa31.26■■■□□ 2.59
TNFRSF25-213ENST00000480393 NFE2L3Q9Y4A8 694 aa31.26■■■□□ 2.59
TNFRSF25-213ENST00000480393 KDM3AQ9Y4C1 1321 aa31.25■■■□□ 2.59
TNFRSF25-213ENST00000480393 ZBED4O75132 1171 aa31.25■■■□□ 2.59
TNFRSF25-213ENST00000480393 SV2BQ7L1I2 683 aa31.25■■■□□ 2.59
TNFRSF25-213ENST00000480393 CPXCR1Q8N123 301 aa31.25■■■□□ 2.59
TNFRSF25-213ENST00000480393 ETNPPLQ8TBG4 499 aa31.25■■■□□ 2.59
TNFRSF25-213ENST00000480393 UIMC1Q96RL1 719 aa31.25■■■□□ 2.59
TNFRSF25-213ENST00000480393 FAM86B1E9PN63 330 aa31.24■■■□□ 2.59
TNFRSF25-213ENST00000480393 SERPINC1P01008 464 aa31.24■■■□□ 2.59
TNFRSF25-213ENST00000480393 FAM86B2P0C5J1 330 aa31.24■■■□□ 2.59
TNFRSF25-213ENST00000480393 ATP1A3P13637 1013 aa31.24■■■□□ 2.59
TNFRSF25-213ENST00000480393 CD44P16070 742 aaKnown RBP31.24■■■□□ 2.59
TNFRSF25-213ENST00000480393 KCNB1Q14721 858 aa31.24■■■□□ 2.59
TNFRSF25-213ENST00000480393 DPY19L2Q6NUT2 758 aa31.24■■■□□ 2.59
TNFRSF25-213ENST00000480393 XPO4Q9C0E2 1151 aaKnown RBP31.24■■■□□ 2.59
TNFRSF25-213ENST00000480393 EIF2AK3Q9NZJ5 1116 aaKnown RBP31.24■■■□□ 2.59
TNFRSF25-213ENST00000480393 PNMA2Q9UL42 364 aa31.24■■■□□ 2.59
TNFRSF25-213ENST00000480393 PPP1R3GB7ZBB8 358 aa31.24■■■□□ 2.59
TNFRSF25-213ENST00000480393 C19orf81C9J6K1 198 aa31.24■■■□□ 2.59
TNFRSF25-213ENST00000480393 CBFA2T2O43439 604 aa31.24■■■□□ 2.59
TNFRSF25-213ENST00000480393 SEMA3FQ13275 785 aa31.24■■■□□ 2.59
TNFRSF25-213ENST00000480393 TMEM119Q4V9L6 283 aa31.24■■■□□ 2.59
TNFRSF25-213ENST00000480393 LARP4BQ92615 738 aaKnown RBP31.24■■■□□ 2.59
TNFRSF25-213ENST00000480393 FAM20AQ96MK3 541 aa31.24■■■□□ 2.59
TNFRSF25-213ENST00000480393 ZNF830Q96NB3 372 aaPredicted RBP31.24■■■□□ 2.59
TNFRSF25-213ENST00000480393 RAVER2Q9HCJ3 691 aaKnown RBP31.24■■■□□ 2.59
TNFRSF25-213ENST00000480393 CTNND2Q9UQB3 1225 aa31.24■■■□□ 2.59
TNFRSF25-213ENST00000480393 FDX1P10109 184 aa31.23■■■□□ 2.59
TNFRSF25-213ENST00000480393 CCT6AP40227 531 aaKnown RBP31.23■■■□□ 2.59
TNFRSF25-213ENST00000480393 HMGCS2P54868 508 aa31.23■■■□□ 2.59
TNFRSF25-213ENST00000480393 ASIC1P78348 528 aa31.23■■■□□ 2.59
TNFRSF25-213ENST00000480393 DHX8Q14562 1220 aaKnown RBP31.23■■■□□ 2.59
TNFRSF25-213ENST00000480393 KMT5BQ4FZB7 885 aa31.23■■■□□ 2.59
TNFRSF25-213ENST00000480393 MCF2L2Q86YR7 1114 aa31.23■■■□□ 2.59
TNFRSF25-213ENST00000480393 DDX55Q8NHQ9 600 aaKnown RBP eCLIP31.23■■■□□ 2.59
TNFRSF25-213ENST00000480393 LENG9Q96B70 501 aa31.23■■■□□ 2.59
TNFRSF25-213ENST00000480393 C12orf42Q96LP6 360 aa31.23■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms