RNA–Protein interactions for RNA: ENST00000480067.1

CLDN11-205, Transcript of claudin 11, humanhuman

TSL 1 (best)

Gene CLDN11, Length 1,589 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-205ENST00000480067 PCDHA8Q9Y5H6 950 aa12.81□□□□□ -0.36
CLDN11-205ENST00000480067 MYH6P13533 1939 aa12.8□□□□□ -0.36
CLDN11-205ENST00000480067 SMCHD1A6NHR9 2005 aa12.8□□□□□ -0.36
CLDN11-205ENST00000480067 VPS37CA5D8V6 355 aaPredicted RBP12.8□□□□□ -0.36
CLDN11-205ENST00000480067 B4DLN1 442 aa12.8□□□□□ -0.36
CLDN11-205ENST00000480067 ADAMTS3O15072 1205 aa12.8□□□□□ -0.36
CLDN11-205ENST00000480067 STX6O43752 255 aa12.8□□□□□ -0.36
CLDN11-205ENST00000480067 HOXC6P09630 235 aa12.8□□□□□ -0.36
CLDN11-205ENST00000480067 XRCC5P13010 732 aaKnown RBP12.8□□□□□ -0.36
CLDN11-205ENST00000480067 CLK2P49760 499 aaKnown RBP12.8□□□□□ -0.36
CLDN11-205ENST00000480067 PRMT2P55345 433 aa12.8□□□□□ -0.36
CLDN11-205ENST00000480067 RAET1EQ8TD07 263 aa12.8□□□□□ -0.36
CLDN11-205ENST00000480067 RASGRP4Q8TDF6 673 aa12.8□□□□□ -0.36
CLDN11-205ENST00000480067 OXER1Q8TDS5 423 aa12.8□□□□□ -0.36
CLDN11-205ENST00000480067 IPO9Q96P70 1041 aaKnown RBP12.8□□□□□ -0.36
CLDN11-205ENST00000480067 APBA2Q99767 749 aa12.8□□□□□ -0.36
CLDN11-205ENST00000480067 FOXP1Q9H334 677 aaPredicted RBP12.8□□□□□ -0.36
CLDN11-205ENST00000480067 EHMT1Q9H9B1 1298 aa12.8□□□□□ -0.36
CLDN11-205ENST00000480067 HTTP42858 3142 aa12.8□□□□□ -0.36
CLDN11-205ENST00000480067 CCDC194A0A1B0GVG4 234 aa12.79□□□□□ -0.36
CLDN11-205ENST00000480067 SOWAHBA6NEL2 793 aa12.79□□□□□ -0.36
CLDN11-205ENST00000480067 M0R2N6 131 aa12.79□□□□□ -0.36
CLDN11-205ENST00000480067 EIF2AK2P19525 551 aaKnown RBP12.79□□□□□ -0.36
CLDN11-205ENST00000480067 NR5A1Q13285 461 aa12.79□□□□□ -0.36
CLDN11-205ENST00000480067 OTOP1Q7RTM1 612 aa12.79□□□□□ -0.36
CLDN11-205ENST00000480067 KRT25Q7Z3Z0 450 aa12.79□□□□□ -0.36
CLDN11-205ENST00000480067 ZNF467Q7Z7K2 595 aaPredicted RBP12.79□□□□□ -0.36
CLDN11-205ENST00000480067 NPLOC4Q8TAT6 608 aa12.79□□□□□ -0.36
CLDN11-205ENST00000480067 MAML3Q96JK9 1138 aa12.79□□□□□ -0.36
CLDN11-205ENST00000480067 IWS1Q96ST2 819 aa12.79□□□□□ -0.36
CLDN11-205ENST00000480067 PXMP2Q9NR77 195 aa12.79□□□□□ -0.36
CLDN11-205ENST00000480067 ASB14A6NK59 587 aa12.78□□□□□ -0.36
CLDN11-205ENST00000480067 ALDH5A1P51649 535 aaPredicted RBP12.78□□□□□ -0.36
CLDN11-205ENST00000480067 IRF5Q13568 498 aa12.78□□□□□ -0.36
CLDN11-205ENST00000480067 NONOQ15233 471 aaKnown RBP eCLIP12.78□□□□□ -0.36
CLDN11-205ENST00000480067 PIK3AP1Q6ZUJ8 805 aa12.78□□□□□ -0.36
CLDN11-205ENST00000480067 TRMT44Q8IYL2 757 aaKnown RBP12.78□□□□□ -0.36
CLDN11-205ENST00000480067 PGBD1Q96JS3 809 aa12.78□□□□□ -0.36
CLDN11-205ENST00000480067 ANO3Q9BYT9 981 aa12.78□□□□□ -0.36
CLDN11-205ENST00000480067 LOC102724159A0A0B4J2E5 919 aa12.77□□□□□ -0.36
CLDN11-205ENST00000480067 NR3C2P08235 984 aa12.77□□□□□ -0.36
CLDN11-205ENST00000480067 U2AF2P26368 475 aaKnown RBP eCLIP12.77□□□□□ -0.36
CLDN11-205ENST00000480067 UBXN2AP68543 259 aa12.77□□□□□ -0.36
CLDN11-205ENST00000480067 PDE4DQ08499 809 aa12.77□□□□□ -0.36
CLDN11-205ENST00000480067 PWP2Q15269 919 aaKnown RBP12.77□□□□□ -0.36
CLDN11-205ENST00000480067 CTU1Q7Z7A3 348 aaKnown RBP12.77□□□□□ -0.36
CLDN11-205ENST00000480067 NOSTRINQ8IVI9 506 aa12.77□□□□□ -0.36
CLDN11-205ENST00000480067 MSL3Q8N5Y2 521 aaKnown RBP12.77□□□□□ -0.36
CLDN11-205ENST00000480067 FGD4Q96M96 766 aa12.77□□□□□ -0.36
CLDN11-205ENST00000480067 PDCD2LQ9BRP1 358 aa12.77□□□□□ -0.36
CLDN11-205ENST00000480067 TINF2Q9BSI4 451 aa12.77□□□□□ -0.36
CLDN11-205ENST00000480067 ASTN1O14525 1302 aa12.77□□□□□ -0.37
CLDN11-205ENST00000480067 ADCY3O60266 1144 aa12.77□□□□□ -0.37
CLDN11-205ENST00000480067 MYCLP12524 364 aaPredicted RBP12.77□□□□□ -0.37
CLDN11-205ENST00000480067 SREBF1P36956 1147 aa12.77□□□□□ -0.37
CLDN11-205ENST00000480067 ARHGAP4P98171 946 aa12.77□□□□□ -0.37
CLDN11-205ENST00000480067 PGM5Q15124 567 aa12.77□□□□□ -0.37
CLDN11-205ENST00000480067 STXBP2Q15833 593 aa12.77□□□□□ -0.37
CLDN11-205ENST00000480067 CCL14Q16627 93 aa12.77□□□□□ -0.37
CLDN11-205ENST00000480067 OLFML2BQ68BL8 750 aa12.77□□□□□ -0.37
CLDN11-205ENST00000480067 XRRA1Q6P2D8 792 aa12.77□□□□□ -0.37
CLDN11-205ENST00000480067 MAMDC4Q6UXC1 1216 aa12.77□□□□□ -0.37
CLDN11-205ENST00000480067 FERMT3Q86UX7 667 aa12.77□□□□□ -0.37
CLDN11-205ENST00000480067 VSIG10LQ86VR7 867 aa12.77□□□□□ -0.37
CLDN11-205ENST00000480067 TBCKQ8TEA7 893 aa12.77□□□□□ -0.37
CLDN11-205ENST00000480067 TNFRSF25Q93038 417 aa12.77□□□□□ -0.37
CLDN11-205ENST00000480067 MTMR6Q9Y217 621 aa12.77□□□□□ -0.37
CLDN11-205ENST00000480067 RPTORQ8N122 1335 aa12.76□□□□□ -0.37
CLDN11-205ENST00000480067 EIF3JO75822 258 aaKnown RBP12.76□□□□□ -0.37
CLDN11-205ENST00000480067 CCND2P30279 289 aa12.76□□□□□ -0.37
CLDN11-205ENST00000480067 ZNF76P36508 570 aa12.76□□□□□ -0.37
CLDN11-205ENST00000480067 USP11P51784 963 aa12.76□□□□□ -0.37
CLDN11-205ENST00000480067 INF2Q27J81 1249 aa12.76□□□□□ -0.37
CLDN11-205ENST00000480067 EARS2Q5JPH6 523 aaKnown RBP12.76□□□□□ -0.37
CLDN11-205ENST00000480067 MFSD14CQ5VZR4 134 aa12.76□□□□□ -0.37
CLDN11-205ENST00000480067 PCNX4Q63HM2 1172 aa12.76□□□□□ -0.37
CLDN11-205ENST00000480067 ARMCX2Q7L311 632 aa12.76□□□□□ -0.37
CLDN11-205ENST00000480067 PXYLP1Q8TE99 480 aa12.76□□□□□ -0.37
CLDN11-205ENST00000480067 PRDM10Q9NQV6 1147 aa12.76□□□□□ -0.37
CLDN11-205ENST00000480067 FLRT1Q9NZU1 646 aa12.76□□□□□ -0.37
CLDN11-205ENST00000480067 CNPY2Q9Y2B0 182 aa12.76□□□□□ -0.37
CLDN11-205ENST00000480067 PTPN22Q9Y2R2 807 aa12.76□□□□□ -0.37
CLDN11-205ENST00000480067 FRMPD4Q14CM0 1322 aa12.75□□□□□ -0.37
CLDN11-205ENST00000480067 SYNGAP1Q96PV0 1343 aa12.75□□□□□ -0.37
CLDN11-205ENST00000480067 KIF28PB7ZC32 967 aa12.75□□□□□ -0.37
CLDN11-205ENST00000480067 ZSCAN22P10073 491 aaPredicted RBP12.75□□□□□ -0.37
CLDN11-205ENST00000480067 ELNP15502 786 aa12.75□□□□□ -0.37
CLDN11-205ENST00000480067 EDNRBP24530 442 aa12.75□□□□□ -0.37
CLDN11-205ENST00000480067 CYP2C19P33261 490 aa12.75□□□□□ -0.37
CLDN11-205ENST00000480067 PKN2Q16513 984 aaKnown RBP12.75□□□□□ -0.37
CLDN11-205ENST00000480067 FOXD4L5Q5VV16 416 aaPredicted RBP12.75□□□□□ -0.37
CLDN11-205ENST00000480067 NEK8Q86SG6 692 aa12.75□□□□□ -0.37
CLDN11-205ENST00000480067 SLAIN1Q8ND83 568 aa12.75□□□□□ -0.37
CLDN11-205ENST00000480067 IL31RAQ8NI17 732 aa12.75□□□□□ -0.37
CLDN11-205ENST00000480067 FOXD4L4Q8WXT5 416 aaPredicted RBP12.75□□□□□ -0.37
CLDN11-205ENST00000480067 TRIB2Q92519 343 aa12.75□□□□□ -0.37
CLDN11-205ENST00000480067 ZSCAN16Q9H4T2 348 aaPredicted RBP12.75□□□□□ -0.37
CLDN11-205ENST00000480067 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.75□□□□□ -0.37
CLDN11-205ENST00000480067 RTEL1Q9NZ71 1219 aa12.75□□□□□ -0.37
CLDN11-205ENST00000480067 PTCH2Q9Y6C5 1203 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms