RNA–Protein interactions for RNA: ENST00000479511.1

GAPVD1-217, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 575 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-217ENST00000479511 APPP05067 770 aa9.49□□□□□ -0.89
GAPVD1-217ENST00000479511 NFICP08651 508 aa9.49□□□□□ -0.89
GAPVD1-217ENST00000479511 TRIM27P14373 513 aa9.49□□□□□ -0.89
GAPVD1-217ENST00000479511 IFNGR1P15260 489 aa9.49□□□□□ -0.89
GAPVD1-217ENST00000479511 YBX3P16989 372 aaKnown RBP eCLIP9.49□□□□□ -0.894e-11■□□□□ 11.3
GAPVD1-217ENST00000479511 CCND1P24385 295 aa9.49□□□□□ -0.89
GAPVD1-217ENST00000479511 ANKRD34AQ69YU3 496 aa9.49□□□□□ -0.89
GAPVD1-217ENST00000479511 OVCH1Q7RTY7 1134 aa9.49□□□□□ -0.89
GAPVD1-217ENST00000479511 DTWD2Q8NBA8 298 aa9.49□□□□□ -0.89
GAPVD1-217ENST00000479511 TRIM11Q96F44 468 aa9.49□□□□□ -0.89
GAPVD1-217ENST00000479511 MRPL18Q9H0U6 180 aaKnown RBP9.49□□□□□ -0.89
GAPVD1-217ENST00000479511 CABP5Q9NP86 173 aa9.49□□□□□ -0.89
GAPVD1-217ENST00000479511 ANLNQ9NQW6 1124 aa9.49□□□□□ -0.89
GAPVD1-217ENST00000479511 RNF112Q9ULX5 631 aa9.49□□□□□ -0.89
GAPVD1-217ENST00000479511 LMTK3Q96Q04 1460 aa9.48□□□□□ -0.89
GAPVD1-217ENST00000479511 MRC2Q9UBG0 1479 aa9.48□□□□□ -0.89
GAPVD1-217ENST00000479511 SHISA3A0PJX4 238 aa9.48□□□□□ -0.89
GAPVD1-217ENST00000479511 PTPDC1A2A3K4 754 aa9.48□□□□□ -0.89
GAPVD1-217ENST00000479511 FAM229AH3BQW9 127 aa9.48□□□□□ -0.89
GAPVD1-217ENST00000479511 ULK1O75385 1050 aa9.48□□□□□ -0.89
GAPVD1-217ENST00000479511 SOD2P04179 222 aa9.48□□□□□ -0.89
GAPVD1-217ENST00000479511 PLS3P13797 630 aa9.48□□□□□ -0.89
GAPVD1-217ENST00000479511 LTBRP36941 435 aa9.48□□□□□ -0.89
GAPVD1-217ENST00000479511 PURAQ00577 322 aaKnown RBP9.48□□□□□ -0.89
GAPVD1-217ENST00000479511 PAK1Q13153 545 aa9.48□□□□□ -0.89
GAPVD1-217ENST00000479511 NMIQ13287 307 aaPredicted RBP9.48□□□□□ -0.89
GAPVD1-217ENST00000479511 DHX8Q14562 1220 aaKnown RBP9.48□□□□□ -0.89
GAPVD1-217ENST00000479511 C10orf62Q5T681 223 aaPredicted RBP9.48□□□□□ -0.89
GAPVD1-217ENST00000479511 LCE2CQ5TA81 110 aa9.48□□□□□ -0.89
GAPVD1-217ENST00000479511 IL31Q6EBC2 164 aa9.48□□□□□ -0.89
GAPVD1-217ENST00000479511 IGF2-ASQ6U949 168 aa9.48□□□□□ -0.89
GAPVD1-217ENST00000479511 EPM2AIP1Q7L775 607 aaPredicted RBP9.48□□□□□ -0.89
GAPVD1-217ENST00000479511 NPAS3Q8IXF0 933 aa9.48□□□□□ -0.89
GAPVD1-217ENST00000479511 C1orf162Q8NEQ5 155 aaPredicted RBP9.48□□□□□ -0.89
GAPVD1-217ENST00000479511 FAXDC2Q96IV6 333 aa9.48□□□□□ -0.89
GAPVD1-217ENST00000479511 FCRL3Q96P31 734 aaPredicted RBP9.48□□□□□ -0.89
GAPVD1-217ENST00000479511 C14orf119Q9NWQ9 140 aa9.48□□□□□ -0.89
GAPVD1-217ENST00000479511 CLEC1BQ9P126 229 aa9.48□□□□□ -0.89
GAPVD1-217ENST00000479511 ANKRD6Q9Y2G4 727 aa9.48□□□□□ -0.89
GAPVD1-217ENST00000479511 BACE2Q9Y5Z0 518 aa9.48□□□□□ -0.89
GAPVD1-217ENST00000479511 WDR62O43379 1518 aa9.47□□□□□ -0.89
GAPVD1-217ENST00000479511 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.47□□□□□ -0.89
GAPVD1-217ENST00000479511 F8W735 103 aaPredicted RBP9.47□□□□□ -0.89
GAPVD1-217ENST00000479511 IFRD1O00458 451 aaPredicted RBP9.47□□□□□ -0.89
GAPVD1-217ENST00000479511 PCDHGA12O60330 932 aa9.47□□□□□ -0.89
GAPVD1-217ENST00000479511 ALX3O95076 343 aa9.47□□□□□ -0.89
GAPVD1-217ENST00000479511 GSNP06396 782 aa9.47□□□□□ -0.89
GAPVD1-217ENST00000479511 PAX3P23760 479 aa9.47□□□□□ -0.89
GAPVD1-217ENST00000479511 KPNA1P52294 538 aaPredicted RBP9.47□□□□□ -0.89
GAPVD1-217ENST00000479511 CDK5R2Q13319 367 aa9.47□□□□□ -0.89
GAPVD1-217ENST00000479511 TMEM240Q5SV17 173 aa9.47□□□□□ -0.89
GAPVD1-217ENST00000479511 TOP6BLQ8N6T0 577 aa9.47□□□□□ -0.89
GAPVD1-217ENST00000479511 PNMA8BQ9ULN7 279 aaPredicted RBP9.47□□□□□ -0.89
GAPVD1-217ENST00000479511 TPX2Q9ULW0 747 aaKnown RBP9.47□□□□□ -0.89
GAPVD1-217ENST00000479511 PCDHGA9Q9Y5G4 932 aaKnown RBP9.47□□□□□ -0.89
GAPVD1-217ENST00000479511 PCDHGA8Q9Y5G5 932 aa9.47□□□□□ -0.89
GAPVD1-217ENST00000479511 PCDHGA7Q9Y5G6 932 aa9.47□□□□□ -0.89
GAPVD1-217ENST00000479511 PCDHGA6Q9Y5G7 932 aa9.47□□□□□ -0.89
GAPVD1-217ENST00000479511 PCDHGA3Q9Y5H0 932 aa9.47□□□□□ -0.89
GAPVD1-217ENST00000479511 PCDHGA2Q9Y5H1 932 aa9.47□□□□□ -0.89
GAPVD1-217ENST00000479511 HMGXB3Q12766 1538 aa9.46□□□□□ -0.89
GAPVD1-217ENST00000479511 TGM5O43548 720 aa9.46□□□□□ -0.9
GAPVD1-217ENST00000479511 PPFIA4O75335 1185 aa9.46□□□□□ -0.9
GAPVD1-217ENST00000479511 RBP3P10745 1247 aa9.46□□□□□ -0.9
GAPVD1-217ENST00000479511 LPOP22079 712 aaPredicted RBP9.46□□□□□ -0.9
GAPVD1-217ENST00000479511 RECQLP46063 649 aaPredicted RBP9.46□□□□□ -0.9
GAPVD1-217ENST00000479511 DNM2P50570 870 aa9.46□□□□□ -0.9
GAPVD1-217ENST00000479511 USP11P51784 963 aa9.46□□□□□ -0.9
GAPVD1-217ENST00000479511 NEK3P51956 506 aa9.46□□□□□ -0.9
GAPVD1-217ENST00000479511 GRM3Q14832 879 aa9.46□□□□□ -0.9
GAPVD1-217ENST00000479511 SEZ6L2Q6UXD5 910 aa9.46□□□□□ -0.9
GAPVD1-217ENST00000479511 C11orf74Q86VG3 221 aa9.46□□□□□ -0.9
GAPVD1-217ENST00000479511 CMIPQ8IY22 773 aa9.46□□□□□ -0.9
GAPVD1-217ENST00000479511 FBXO41Q8TF61 875 aa9.46□□□□□ -0.9
GAPVD1-217ENST00000479511 FBLIM1Q8WUP2 373 aa9.46□□□□□ -0.9
GAPVD1-217ENST00000479511 SLC5A5Q92911 643 aa9.46□□□□□ -0.9
GAPVD1-217ENST00000479511 SARGQ9BW04 601 aa9.46□□□□□ -0.9
GAPVD1-217ENST00000479511 PRDM11Q9NQV5 511 aa9.46□□□□□ -0.9
GAPVD1-217ENST00000479511 OXSMQ9NWU1 459 aa9.46□□□□□ -0.9
GAPVD1-217ENST00000479511 PPARGC1AQ9UBK2 798 aaKnown RBP9.46□□□□□ -0.9
GAPVD1-217ENST00000479511 DDX20Q9UHI6 824 aaKnown RBP9.46□□□□□ -0.9
GAPVD1-217ENST00000479511 GIT1Q9Y2X7 761 aa9.46□□□□□ -0.9
GAPVD1-217ENST00000479511 CCDC66A2RUB6 948 aa9.45□□□□□ -0.9
GAPVD1-217ENST00000479511 SESN3P58005 492 aa9.45□□□□□ -0.9
GAPVD1-217ENST00000479511 OCRLQ01968 901 aa9.45□□□□□ -0.9
GAPVD1-217ENST00000479511 FAPQ12884 760 aa9.45□□□□□ -0.9
GAPVD1-217ENST00000479511 GALEQ14376 348 aa9.45□□□□□ -0.9
GAPVD1-217ENST00000479511 MINDY4Q4G0A6 757 aa9.45□□□□□ -0.9
GAPVD1-217ENST00000479511 E4F1Q66K89 784 aaPredicted RBP9.45□□□□□ -0.9
GAPVD1-217ENST00000479511 CWF19L1Q69YN2 538 aaKnown RBP9.45□□□□□ -0.9
GAPVD1-217ENST00000479511 PGM2L1Q6PCE3 622 aa9.45□□□□□ -0.9
GAPVD1-217ENST00000479511 LYPD4Q6UWN0 246 aa9.45□□□□□ -0.9
GAPVD1-217ENST00000479511 C11orf96Q7Z7L8 435 aa9.45□□□□□ -0.9
GAPVD1-217ENST00000479511 CMTR2Q8IYT2 770 aaKnown RBP9.45□□□□□ -0.9
GAPVD1-217ENST00000479511 CISD2Q8N5K1 135 aaKnown RBP9.45□□□□□ -0.9
GAPVD1-217ENST00000479511 RCBTB1Q8NDN9 531 aa9.45□□□□□ -0.9
GAPVD1-217ENST00000479511 CLIP3Q96DZ5 547 aa9.45□□□□□ -0.9
GAPVD1-217ENST00000479511 ALG1Q9BT22 464 aa9.45□□□□□ -0.9
GAPVD1-217ENST00000479511 IPPKQ9H8X2 491 aa9.45□□□□□ -0.9
GAPVD1-217ENST00000479511 STK17AQ9UEE5 414 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms