RNA–Protein interactions for RNA: ENST00000479501.5

COL20A1-206, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 4,536 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-206ENST00000479501 RABGAP1Q9Y3P9 1069 aa15.78■□□□□ 0.12
COL20A1-206ENST00000479501 NEBLO76041 1014 aa15.77■□□□□ 0.12
COL20A1-206ENST00000479501 CASP7P55210 303 aa15.77■□□□□ 0.12
COL20A1-206ENST00000479501 GRIPAP1Q4V328 841 aa15.77■□□□□ 0.12
COL20A1-206ENST00000479501 ANKRD13CQ8N6S4 541 aa15.77■□□□□ 0.12
COL20A1-206ENST00000479501 PANX2Q96RD6 677 aa15.77■□□□□ 0.12
COL20A1-206ENST00000479501 CEP83Q9Y592 693 aa15.77■□□□□ 0.12
COL20A1-206ENST00000479501 FOXN1O15353 648 aa15.77■□□□□ 0.12
COL20A1-206ENST00000479501 MAN2A1Q16706 1144 aa15.77■□□□□ 0.12
COL20A1-206ENST00000479501 RABGGTAQ92696 567 aa15.77■□□□□ 0.12
COL20A1-206ENST00000479501 GJA10Q969M2 543 aa15.77■□□□□ 0.12
COL20A1-206ENST00000479501 CEP95Q96GE4 821 aa15.77■□□□□ 0.12
COL20A1-206ENST00000479501 USP17L5A8MUK1 530 aa15.77■□□□□ 0.11
COL20A1-206ENST00000479501 CALCOCO2Q13137 446 aa15.77■□□□□ 0.11
COL20A1-206ENST00000479501 GRM4Q14833 912 aa15.77■□□□□ 0.11
COL20A1-206ENST00000479501 C12orf60Q5U649 245 aa15.77■□□□□ 0.11
COL20A1-206ENST00000479501 KLHL7Q8IXQ5 586 aa15.77■□□□□ 0.11
COL20A1-206ENST00000479501 DDX12PQ92771 950 aa15.77■□□□□ 0.11
COL20A1-206ENST00000479501 CEP63Q96MT8 703 aa15.77■□□□□ 0.11
COL20A1-206ENST00000479501 MYO1AQ9UBC5 1043 aa15.77■□□□□ 0.11
COL20A1-206ENST00000479501 IKBKGQ9Y6K9 419 aa15.77■□□□□ 0.11
COL20A1-206ENST00000479501 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.77■□□□□ 0.11
COL20A1-206ENST00000479501 MST1RQ04912 1400 aa15.77■□□□□ 0.11
COL20A1-206ENST00000479501 PRR29P0C7W0 189 aa15.76■□□□□ 0.11
COL20A1-206ENST00000479501 BAG6P46379 1132 aa15.76■□□□□ 0.11
COL20A1-206ENST00000479501 FOXP4Q8IVH2 680 aaPredicted RBP15.76■□□□□ 0.11
COL20A1-206ENST00000479501 IWS1Q96ST2 819 aa15.76■□□□□ 0.11
COL20A1-206ENST00000479501 THAP9Q9H5L6 903 aa15.76■□□□□ 0.11
COL20A1-206ENST00000479501 TCP1P17987 556 aaKnown RBP15.76■□□□□ 0.11
COL20A1-206ENST00000479501 ZBTB16Q05516 673 aa15.76■□□□□ 0.11
COL20A1-206ENST00000479501 STRN3Q13033 797 aa15.76■□□□□ 0.11
COL20A1-206ENST00000479501 PPFIA1Q13136 1202 aa15.76■□□□□ 0.11
COL20A1-206ENST00000479501 TCP11X2Q5H9J9 407 aa15.76■□□□□ 0.11
COL20A1-206ENST00000479501 SND1Q7KZF4 910 aaKnown RBP eCLIP15.76■□□□□ 0.11
COL20A1-206ENST00000479501 GSTA5Q7RTV2 222 aa15.76■□□□□ 0.11
COL20A1-206ENST00000479501 SRGAP1Q7Z6B7 1085 aa15.76■□□□□ 0.11
COL20A1-206ENST00000479501 SRBD1Q8N5C6 995 aaKnown RBP15.76■□□□□ 0.11
COL20A1-206ENST00000479501 HPS5Q9UPZ3 1129 aa15.76■□□□□ 0.11
COL20A1-206ENST00000479501 HYOU1Q9Y4L1 999 aa15.76■□□□□ 0.11
COL20A1-206ENST00000479501 NR2F2P24468 414 aa15.76■□□□□ 0.11
COL20A1-206ENST00000479501 ARHGAP25P42331 645 aa15.76■□□□□ 0.11
COL20A1-206ENST00000479501 RC3H1Q5TC82 1133 aaKnown RBP15.76■□□□□ 0.11
COL20A1-206ENST00000479501 LRCH2Q5VUJ6 765 aa15.76■□□□□ 0.11
COL20A1-206ENST00000479501 UBLCP1Q8WVY7 318 aaPredicted RBP15.76■□□□□ 0.11
COL20A1-206ENST00000479501 DCCP43146 1447 aa15.76■□□□□ 0.11
COL20A1-206ENST00000479501 TESPA1A2RU30 521 aaPredicted RBP15.76■□□□□ 0.11
COL20A1-206ENST00000479501 STAMBPO95630 424 aa15.76■□□□□ 0.11
COL20A1-206ENST00000479501 PRKG1Q13976 671 aa15.76■□□□□ 0.11
COL20A1-206ENST00000479501 PPP1R7Q15435 360 aa15.76■□□□□ 0.11
COL20A1-206ENST00000479501 KRT26Q7Z3Y9 468 aa15.76■□□□□ 0.11
COL20A1-206ENST00000479501 SYCE1Q8N0S2 351 aa15.76■□□□□ 0.11
COL20A1-206ENST00000479501 ACRBPQ8NEB7 543 aa15.76■□□□□ 0.11
COL20A1-206ENST00000479501 CABS1Q96KC9 395 aa15.76■□□□□ 0.11
COL20A1-206ENST00000479501 GDAP1L1Q96MZ0 367 aa15.76■□□□□ 0.11
COL20A1-206ENST00000479501 TEKT3Q9BXF9 490 aa15.76■□□□□ 0.11
COL20A1-206ENST00000479501 FBXO2Q9UK22 296 aaPredicted RBP15.76■□□□□ 0.11
COL20A1-206ENST00000479501 METTL16Q86W50 562 aaKnown RBP15.75■□□□□ 0.11
COL20A1-206ENST00000479501 CCDC25Q86WR0 208 aa15.75■□□□□ 0.11
COL20A1-206ENST00000479501 SIGLEC1Q9BZZ2 1709 aa15.75■□□□□ 0.11
COL20A1-206ENST00000479501 MAP2K2P36507 400 aa15.75■□□□□ 0.11
COL20A1-206ENST00000479501 CACNB1Q02641 598 aaPredicted RBP15.75■□□□□ 0.11
COL20A1-206ENST00000479501 U2AF1L4Q8WU68 220 aaKnown RBP15.75■□□□□ 0.11
COL20A1-206ENST00000479501 MASTLQ96GX5 879 aa15.75■□□□□ 0.11
COL20A1-206ENST00000479501 CCPG1Q9ULG6 757 aa15.75■□□□□ 0.11
COL20A1-206ENST00000479501 BUB1O43683 1085 aa15.75■□□□□ 0.11
COL20A1-206ENST00000479501 ZBED6P86452 979 aa15.75■□□□□ 0.11
COL20A1-206ENST00000479501 NEDD1Q8NHV4 660 aa15.75■□□□□ 0.11
COL20A1-206ENST00000479501 GOLGA5Q8TBA6 731 aa15.75■□□□□ 0.11
COL20A1-206ENST00000479501 VIMP08670 466 aaKnown RBP15.75■□□□□ 0.11
COL20A1-206ENST00000479501 CACNB3P54284 484 aa15.75■□□□□ 0.11
COL20A1-206ENST00000479501 GPSM2P81274 684 aa15.75■□□□□ 0.11
COL20A1-206ENST00000479501 LACTBP83111 547 aaPredicted RBP15.75■□□□□ 0.11
COL20A1-206ENST00000479501 PAK2Q13177 524 aa15.75■□□□□ 0.11
COL20A1-206ENST00000479501 EXOC3L4Q17RC7 722 aa15.75■□□□□ 0.11
COL20A1-206ENST00000479501 MCF2L2Q86YR7 1114 aa15.75■□□□□ 0.11
COL20A1-206ENST00000479501 UBL4BQ8N7F7 174 aa15.75■□□□□ 0.11
COL20A1-206ENST00000479501 BARHL2Q9NY43 387 aa15.75■□□□□ 0.11
COL20A1-206ENST00000479501 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.75■□□□□ 0.11
COL20A1-206ENST00000479501 ENC1O14682 589 aa15.74■□□□□ 0.11
COL20A1-206ENST00000479501 MYCNP04198 464 aaPredicted RBP15.74■□□□□ 0.11
COL20A1-206ENST00000479501 ATP2C1P98194 919 aaPredicted RBP15.74■□□□□ 0.11
COL20A1-206ENST00000479501 CDC37Q16543 378 aaPredicted RBP15.74■□□□□ 0.11
COL20A1-206ENST00000479501 STAG2Q8N3U4 1231 aa15.74■□□□□ 0.11
COL20A1-206ENST00000479501 LINC00116Q8NCU8 138 aa15.74■□□□□ 0.11
COL20A1-206ENST00000479501 MFAP3LO75121 409 aa15.74■□□□□ 0.11
COL20A1-206ENST00000479501 CLNS1AP54105 237 aaKnown RBP15.74■□□□□ 0.11
COL20A1-206ENST00000479501 ODR4Q5SWX8 454 aa15.74■□□□□ 0.11
COL20A1-206ENST00000479501 AFF2P51816 1311 aa15.74■□□□□ 0.11
COL20A1-206ENST00000479501 UBXN2AP68543 259 aa15.74■□□□□ 0.11
COL20A1-206ENST00000479501 KCNK9Q9NPC2 374 aa15.74■□□□□ 0.11
COL20A1-206ENST00000479501 SERPINA10Q9UK55 444 aa15.74■□□□□ 0.11
COL20A1-206ENST00000479501 ACTN4O43707 911 aaKnown RBP15.73■□□□□ 0.11
COL20A1-206ENST00000479501 MXRA7P84157 204 aa15.73■□□□□ 0.11
COL20A1-206ENST00000479501 PSMD2Q13200 908 aa15.73■□□□□ 0.11
COL20A1-206ENST00000479501 SYDE2Q5VT97 1194 aa15.73■□□□□ 0.11
COL20A1-206ENST00000479501 OTUD6AQ7L8S5 288 aa15.73■□□□□ 0.11
COL20A1-206ENST00000479501 PPP1R14CQ8TAE6 165 aa15.73■□□□□ 0.11
COL20A1-206ENST00000479501 TRIM31Q9BZY9 425 aa15.73■□□□□ 0.11
COL20A1-206ENST00000479501 RAD17O75943 681 aa15.73■□□□□ 0.11
COL20A1-206ENST00000479501 NDUFA10O95299 355 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms