RNA–Protein interactions for RNA: ENST00000478896.2

VCL-205, Transcript of vinculin, humanhuman

TSL 5

Gene VCL, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-205ENST00000478896 DGKHQ86XP1 1220 aa15.51■□□□□ 0.07
VCL-205ENST00000478896 PNMA1Q8ND90 353 aa15.51■□□□□ 0.07
VCL-205ENST00000478896 COPS5Q92905 334 aa15.51■□□□□ 0.07
VCL-205ENST00000478896 UBA5Q9GZZ9 404 aa15.51■□□□□ 0.07
VCL-205ENST00000478896 CPVLQ9H3G5 476 aa15.51■□□□□ 0.07
VCL-205ENST00000478896 RWDD1Q9H446 243 aaPredicted RBP15.51■□□□□ 0.07
VCL-205ENST00000478896 PRDM6Q9NQX0 595 aa15.51■□□□□ 0.07
VCL-205ENST00000478896 THEGQ9P2T0 379 aa15.51■□□□□ 0.07
VCL-205ENST00000478896 NOD1Q9Y239 953 aa15.51■□□□□ 0.07
VCL-205ENST00000478896 YBX2Q9Y2T7 364 aaKnown RBP15.51■□□□□ 0.07
VCL-205ENST00000478896 KPNA6O60684 536 aa15.5■□□□□ 0.07
VCL-205ENST00000478896 ATP2A2P16615 1042 aaKnown RBP15.5■□□□□ 0.07
VCL-205ENST00000478896 EDNRBP24530 442 aa15.5■□□□□ 0.07
VCL-205ENST00000478896 NT5C2P49902 561 aa15.5■□□□□ 0.07
VCL-205ENST00000478896 AAMPQ13685 434 aa15.5■□□□□ 0.07
VCL-205ENST00000478896 CCDC85BQ15834 202 aaPredicted RBP15.5■□□□□ 0.07
VCL-205ENST00000478896 NBPF20Q3BBV1 942 aa15.5■□□□□ 0.07
VCL-205ENST00000478896 CHD1LQ86WJ1 897 aa15.5■□□□□ 0.07
VCL-205ENST00000478896 PPP1R13LQ8WUF5 828 aa15.5■□□□□ 0.07
VCL-205ENST00000478896 ABCB11O95342 1321 aa15.49■□□□□ 0.07
VCL-205ENST00000478896 B4E1Z4 1266 aa15.49■□□□□ 0.07
VCL-205ENST00000478896 HIP1O00291 1037 aa15.49■□□□□ 0.07
VCL-205ENST00000478896 ACTN1P12814 892 aa15.49■□□□□ 0.07
VCL-205ENST00000478896 ADGRE1Q14246 886 aa15.49■□□□□ 0.07
VCL-205ENST00000478896 ASPRV1Q53RT3 343 aa15.49■□□□□ 0.07
VCL-205ENST00000478896 NFRKBQ6P4R8 1299 aa15.49■□□□□ 0.07
VCL-205ENST00000478896 SMC5Q8IY18 1101 aa15.49■□□□□ 0.07
VCL-205ENST00000478896 MICALL1Q8N3F8 863 aa15.49■□□□□ 0.07
VCL-205ENST00000478896 RETREG2Q8NC44 543 aa15.49■□□□□ 0.07
VCL-205ENST00000478896 PCDHA11Q9Y5I1 949 aa15.49■□□□□ 0.07
VCL-205ENST00000478896 KIAA1217Q5T5P2 1943 aa15.49■□□□□ 0.07
VCL-205ENST00000478896 ARIH2O95376 493 aa15.48■□□□□ 0.07
VCL-205ENST00000478896 MYOGP15173 224 aa15.48■□□□□ 0.07
VCL-205ENST00000478896 RFC2P35250 354 aa15.48■□□□□ 0.07
VCL-205ENST00000478896 IMMTQ16891 758 aaKnown RBP15.48■□□□□ 0.07
VCL-205ENST00000478896 SEPT14Q6ZU15 432 aa15.48■□□□□ 0.07
VCL-205ENST00000478896 PLEKHM2Q8IWE5 1019 aa15.48■□□□□ 0.07
VCL-205ENST00000478896 ADGRF4Q8IZF3 695 aa15.48■□□□□ 0.07
VCL-205ENST00000478896 IL27Q8NEV9 243 aa15.48■□□□□ 0.07
VCL-205ENST00000478896 ZSCAN10Q96SZ4 725 aaPredicted RBP15.48■□□□□ 0.07
VCL-205ENST00000478896 FTOQ9C0B1 505 aaKnown RBP eCLIP15.48■□□□□ 0.07
VCL-205ENST00000478896 A0A0C4DFX4 3053 aa15.48■□□□□ 0.07
VCL-205ENST00000478896 A6NJR5 290 aa15.47■□□□□ 0.07
VCL-205ENST00000478896 PITPNM1O00562 1244 aa15.47■□□□□ 0.07
VCL-205ENST00000478896 PARP1P09874 1014 aaKnown RBP15.47■□□□□ 0.07
VCL-205ENST00000478896 PTPN11Q06124 597 aaPredicted RBP15.47■□□□□ 0.07
VCL-205ENST00000478896 BFSP2Q13515 415 aa15.47■□□□□ 0.07
VCL-205ENST00000478896 TMEM67Q5HYA8 995 aa15.47■□□□□ 0.07
VCL-205ENST00000478896 MCF2L2Q86YR7 1114 aa15.47■□□□□ 0.07
VCL-205ENST00000478896 RGS22Q8NE09 1264 aa15.47■□□□□ 0.07
VCL-205ENST00000478896 NSUN6Q8TEA1 469 aaKnown RBP15.47■□□□□ 0.07
VCL-205ENST00000478896 ATXN2LQ8WWM7 1075 aaKnown RBP15.47■□□□□ 0.07
VCL-205ENST00000478896 YTHDC1Q96MU7 727 aaKnown RBP15.47■□□□□ 0.07
VCL-205ENST00000478896 UBAC1Q9BSL1 405 aa15.47■□□□□ 0.07
VCL-205ENST00000478896 OSBPL3Q9H4L5 887 aa15.47■□□□□ 0.07
VCL-205ENST00000478896 CUL9Q8IWT3 2517 aa15.47■□□□□ 0.07
VCL-205ENST00000478896 VCANP13611 3396 aa15.46■□□□□ 0.07
VCL-205ENST00000478896 TRIP12Q14669 1992 aaPredicted RBP15.46■□□□□ 0.07
VCL-205ENST00000478896 GH1P01241 217 aa15.46■□□□□ 0.07
VCL-205ENST00000478896 MMP3P08254 477 aa15.46■□□□□ 0.07
VCL-205ENST00000478896 IQCF3P0C7M6 154 aa15.46■□□□□ 0.07
VCL-205ENST00000478896 NUCB1Q02818 461 aa15.46■□□□□ 0.07
VCL-205ENST00000478896 STXBP2Q15833 593 aa15.46■□□□□ 0.07
VCL-205ENST00000478896 LY6KQ17RY6 165 aa15.46■□□□□ 0.07
VCL-205ENST00000478896 QRICH1Q2TAL8 776 aa15.46■□□□□ 0.07
VCL-205ENST00000478896 ARHGEF16Q5VV41 709 aa15.46■□□□□ 0.07
VCL-205ENST00000478896 CHST3Q7LGC8 479 aa15.46■□□□□ 0.07
VCL-205ENST00000478896 FBXO11Q86XK2 927 aa15.46■□□□□ 0.07
VCL-205ENST00000478896 CCDC155Q8N6L0 562 aa15.46■□□□□ 0.07
VCL-205ENST00000478896 ENAHQ8N8S7 591 aaPredicted RBP15.46■□□□□ 0.07
VCL-205ENST00000478896 SYTL5Q8TDW5 730 aaPredicted RBP15.46■□□□□ 0.07
VCL-205ENST00000478896 AFG1LQ8WV93 481 aa15.46■□□□□ 0.07
VCL-205ENST00000478896 TAAR1Q96RJ0 339 aa15.46■□□□□ 0.07
VCL-205ENST00000478896 SLC9A7Q96T83 725 aa15.46■□□□□ 0.07
VCL-205ENST00000478896 RMDN3Q96TC7 470 aa15.46■□□□□ 0.07
VCL-205ENST00000478896 DSCC1Q9BVC3 393 aa15.46■□□□□ 0.07
VCL-205ENST00000478896 KRT23Q9C075 422 aa15.46■□□□□ 0.07
VCL-205ENST00000478896 MAF1Q9H063 256 aa15.46■□□□□ 0.07
VCL-205ENST00000478896 TSPYL2Q9H2G4 693 aaPredicted RBP15.46■□□□□ 0.07
VCL-205ENST00000478896 VAT1LQ9HCJ6 419 aa15.46■□□□□ 0.07
VCL-205ENST00000478896 CTNNA3Q9UI47 895 aa15.46■□□□□ 0.07
VCL-205ENST00000478896 MRPL11Q9Y3B7 192 aaKnown RBP15.46■□□□□ 0.07
VCL-205ENST00000478896 TNFRSF10AO00220 468 aa15.45■□□□□ 0.06
VCL-205ENST00000478896 CFBP00751 764 aa15.45■□□□□ 0.06
VCL-205ENST00000478896 CA3P07451 260 aa15.45■□□□□ 0.06
VCL-205ENST00000478896 EIF2AK2P19525 551 aaKnown RBP15.45■□□□□ 0.06
VCL-205ENST00000478896 PTGISQ16647 500 aa15.45■□□□□ 0.06
VCL-205ENST00000478896 IFIT1BQ5T764 474 aaKnown RBP15.45■□□□□ 0.06
VCL-205ENST00000478896 TBC1D5Q92609 795 aa15.45■□□□□ 0.06
VCL-205ENST00000478896 VWCEQ96DN2 955 aa15.45■□□□□ 0.06
VCL-205ENST00000478896 IWS1Q96ST2 819 aa15.45■□□□□ 0.06
VCL-205ENST00000478896 CNNM2Q9H8M5 875 aa15.45■□□□□ 0.06
VCL-205ENST00000478896 ZSWIM5Q9P217 1185 aa15.45■□□□□ 0.06
VCL-205ENST00000478896 COL20A1Q9P218 1284 aa15.45■□□□□ 0.06
VCL-205ENST00000478896 PRUNE2Q8WUY3 3088 aa15.45■□□□□ 0.06
VCL-205ENST00000478896 KIF28PB7ZC32 967 aa15.44■□□□□ 0.06
VCL-205ENST00000478896 IGHDP01880 384 aa15.44■□□□□ 0.06
VCL-205ENST00000478896 CASTP20810 708 aaKnown RBP15.44■□□□□ 0.06
VCL-205ENST00000478896 MRPS5P82675 430 aaKnown RBP15.44■□□□□ 0.06
VCL-205ENST00000478896 SKIV2LQ15477 1246 aaKnown RBP15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms