RNA–Protein interactions for RNA: ENST00000478469.5

PCCB-214, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 1 (best) BASIC

Gene PCCB, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-214ENST00000478469 ERCC3P19447 782 aa13.34□□□□□ -0.27
PCCB-214ENST00000478469 SETQ01105 290 aaPredicted RBP13.34□□□□□ -0.27
PCCB-214ENST00000478469 FAM47CQ5HY64 1035 aa13.34□□□□□ -0.27
PCCB-214ENST00000478469 IGSF22Q8N9C0 903 aa13.34□□□□□ -0.27
PCCB-214ENST00000478469 ZFP91Q96JP5 570 aaPredicted RBP13.34□□□□□ -0.27
PCCB-214ENST00000478469 IDI2Q9BXS1 227 aa13.34□□□□□ -0.27
PCCB-214ENST00000478469 ZHX1Q9UKY1 873 aaPredicted RBP13.34□□□□□ -0.27
PCCB-214ENST00000478469 SMARCA1P28370 1054 aa13.34□□□□□ -0.27
PCCB-214ENST00000478469 SPDYE2Q495Y8 402 aa13.34□□□□□ -0.27
PCCB-214ENST00000478469 ALS2CR12Q96Q35 445 aa13.34□□□□□ -0.27
PCCB-214ENST00000478469 TAB2Q9NYJ8 693 aa13.34□□□□□ -0.27
PCCB-214ENST00000478469 HPS5Q9UPZ3 1129 aa13.34□□□□□ -0.27
PCCB-214ENST00000478469 GRIK5Q16478 980 aa13.34□□□□□ -0.27
PCCB-214ENST00000478469 ODR4Q5SWX8 454 aa13.34□□□□□ -0.27
PCCB-214ENST00000478469 MRIQ9BWK5 157 aa13.34□□□□□ -0.27
PCCB-214ENST00000478469 TEX13BQ9BXU2 312 aa13.34□□□□□ -0.27
PCCB-214ENST00000478469 RIC8AQ9NPQ8 531 aa13.34□□□□□ -0.27
PCCB-214ENST00000478469 AK9Q5TCS8 1911 aa13.34□□□□□ -0.27
PCCB-214ENST00000478469 EPHX2P34913 555 aa13.34□□□□□ -0.27
PCCB-214ENST00000478469 DNA2P51530 1060 aa13.34□□□□□ -0.27
PCCB-214ENST00000478469 ORC2Q13416 577 aaPredicted RBP13.34□□□□□ -0.27
PCCB-214ENST00000478469 RAPGEF1Q13905 1077 aa13.34□□□□□ -0.27
PCCB-214ENST00000478469 STXBP2Q15833 593 aa13.34□□□□□ -0.27
PCCB-214ENST00000478469 GPC2Q8N158 579 aa13.34□□□□□ -0.27
PCCB-214ENST00000478469 PAF1Q8N7H5 531 aa13.34□□□□□ -0.27
PCCB-214ENST00000478469 SLC7A3Q8WY07 619 aa13.34□□□□□ -0.27
PCCB-214ENST00000478469 FAM20AQ96MK3 541 aa13.34□□□□□ -0.27
PCCB-214ENST00000478469 MAP7D2Q96T17 732 aa13.34□□□□□ -0.27
PCCB-214ENST00000478469 TRIM6Q9C030 488 aaPredicted RBP13.34□□□□□ -0.27
PCCB-214ENST00000478469 H0YCG3 227 aa13.33□□□□□ -0.27
PCCB-214ENST00000478469 VIL1P09327 827 aaKnown RBP13.33□□□□□ -0.27
PCCB-214ENST00000478469 PLCG1P19174 1290 aa13.33□□□□□ -0.27
PCCB-214ENST00000478469 ZBTB8OSQ8IWT0 167 aa13.33□□□□□ -0.27
PCCB-214ENST00000478469 SCYL3Q8IZE3 742 aa13.33□□□□□ -0.27
PCCB-214ENST00000478469 ACBD3Q9H3P7 528 aa13.33□□□□□ -0.27
PCCB-214ENST00000478469 GAKO14976 1311 aa13.33□□□□□ -0.28
PCCB-214ENST00000478469 M0QZ92 97 aa13.33□□□□□ -0.28
PCCB-214ENST00000478469 MEIS1O00470 390 aa13.33□□□□□ -0.28
PCCB-214ENST00000478469 MYL1P05976 194 aa13.33□□□□□ -0.28
PCCB-214ENST00000478469 TMOD1P28289 359 aa13.33□□□□□ -0.28
PCCB-214ENST00000478469 SNW1Q13573 536 aaKnown RBP13.33□□□□□ -0.28
PCCB-214ENST00000478469 MTMR1Q13613 665 aa13.33□□□□□ -0.28
PCCB-214ENST00000478469 CERS5Q8N5B7 392 aa13.33□□□□□ -0.28
PCCB-214ENST00000478469 PDGFDQ9GZP0 370 aaPredicted RBP13.33□□□□□ -0.28
PCCB-214ENST00000478469 SEPT9Q9UHD8 586 aaPredicted RBP13.33□□□□□ -0.28
PCCB-214ENST00000478469 LONRF3Q496Y0 759 aa13.33□□□□□ -0.28
PCCB-214ENST00000478469 MIS18BP1Q6P0N0 1132 aa13.33□□□□□ -0.28
PCCB-214ENST00000478469 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.33□□□□□ -0.28
PCCB-214ENST00000478469 ZNF579Q8NAF0 562 aaKnown RBP13.33□□□□□ -0.28
PCCB-214ENST00000478469 DDX4Q9NQI0 724 aaKnown RBP13.33□□□□□ -0.28
PCCB-214ENST00000478469 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.33□□□□□ -0.28
PCCB-214ENST00000478469 CNTNAP5Q8WYK1 1306 aa13.33□□□□□ -0.28
PCCB-214ENST00000478469 KIF28PB7ZC32 967 aa13.32□□□□□ -0.28
PCCB-214ENST00000478469 AKR1B15C9JRZ8 316 aaPredicted RBP13.32□□□□□ -0.28
PCCB-214ENST00000478469 K7ENM7 598 aa13.32□□□□□ -0.28
PCCB-214ENST00000478469 FDPSP14324 419 aaKnown RBP13.32□□□□□ -0.28
PCCB-214ENST00000478469 CASQ1P31415 396 aa13.32□□□□□ -0.28
PCCB-214ENST00000478469 GNG11P61952 73 aa13.32□□□□□ -0.28
PCCB-214ENST00000478469 SEC23AQ15436 765 aa13.32□□□□□ -0.28
PCCB-214ENST00000478469 NBPF12Q5TAG4 269 aaPredicted RBP13.32□□□□□ -0.28
PCCB-214ENST00000478469 FMNL3Q8IVF7 1028 aa13.32□□□□□ -0.28
PCCB-214ENST00000478469 ACER1Q8TDN7 264 aa13.32□□□□□ -0.28
PCCB-214ENST00000478469 PHF20Q9BVI0 1012 aa13.32□□□□□ -0.28
PCCB-214ENST00000478469 LRRC37A3O60309 1634 aa13.32□□□□□ -0.28
PCCB-214ENST00000478469 CTDNEP1O95476 244 aa13.32□□□□□ -0.28
PCCB-214ENST00000478469 USP11P51784 963 aa13.32□□□□□ -0.28
PCCB-214ENST00000478469 WDR44Q5JSH3 913 aa13.32□□□□□ -0.28
PCCB-214ENST00000478469 RDH13Q8NBN7 331 aa13.32□□□□□ -0.28
PCCB-214ENST00000478469 UPF1Q92900 1129 aaKnown RBP eCLIP13.32□□□□□ -0.281e-7■□□□□ 9.6
PCCB-214ENST00000478469 CEP170P1Q96L14 293 aa13.32□□□□□ -0.28
PCCB-214ENST00000478469 AP5M1Q9H0R1 490 aa13.32□□□□□ -0.28
PCCB-214ENST00000478469 DISC1Q9NRI5 854 aa13.32□□□□□ -0.28
PCCB-214ENST00000478469 TMCO5BA8MYB1 307 aa13.32□□□□□ -0.28
PCCB-214ENST00000478469 U2AF2P26368 475 aaKnown RBP eCLIP13.32□□□□□ -0.28
PCCB-214ENST00000478469 COPB2P35606 906 aa13.32□□□□□ -0.28
PCCB-214ENST00000478469 PAFAH1B1P43034 410 aa13.32□□□□□ -0.28
PCCB-214ENST00000478469 DMP1Q13316 513 aaPredicted RBP13.32□□□□□ -0.28
PCCB-214ENST00000478469 MCM6Q14566 821 aa13.32□□□□□ -0.28
PCCB-214ENST00000478469 FKBP1CQ5VVH2 108 aa13.32□□□□□ -0.28
PCCB-214ENST00000478469 AMIGO3Q86WK7 504 aa13.32□□□□□ -0.28
PCCB-214ENST00000478469 GRAMD1CQ8IYS0 662 aa13.32□□□□□ -0.28
PCCB-214ENST00000478469 EHBP1Q8NDI1 1231 aa13.32□□□□□ -0.28
PCCB-214ENST00000478469 ZKSCAN4Q969J2 545 aaPredicted RBP13.32□□□□□ -0.28
PCCB-214ENST00000478469 JMJD4Q9H9V9 463 aa13.32□□□□□ -0.28
PCCB-214ENST00000478469 LRRIQ4A6NIV6 560 aa13.32□□□□□ -0.28
PCCB-214ENST00000478469 ZNF75DP51815 510 aa13.32□□□□□ -0.28
PCCB-214ENST00000478469 TRIM14Q14142 442 aa13.32□□□□□ -0.28
PCCB-214ENST00000478469 GOLGA5Q8TBA6 731 aa13.32□□□□□ -0.28
PCCB-214ENST00000478469 UBXN4Q92575 508 aa13.32□□□□□ -0.28
PCCB-214ENST00000478469 JPH2Q9BR39 696 aaPredicted RBP13.32□□□□□ -0.28
PCCB-214ENST00000478469 STRCP1A6NGW2 1772 aa13.32□□□□□ -0.28
PCCB-214ENST00000478469 POTEMA6NI47 508 aa13.31□□□□□ -0.28
PCCB-214ENST00000478469 CCDC175P0C221 793 aa13.31□□□□□ -0.28
PCCB-214ENST00000478469 VEGFAP15692 232 aaPredicted RBP13.31□□□□□ -0.28
PCCB-214ENST00000478469 KRT83P78385 493 aa13.31□□□□□ -0.28
PCCB-214ENST00000478469 SNAPC2Q13487 334 aa13.31□□□□□ -0.28
PCCB-214ENST00000478469 IFI16Q16666 785 aaKnown RBP13.31□□□□□ -0.28
PCCB-214ENST00000478469 PDXDC2PQ6P474 469 aa13.31□□□□□ -0.28
PCCB-214ENST00000478469 RGPD1P0DJD0 1748 aa13.31□□□□□ -0.28
PCCB-214ENST00000478469 GNA14O95837 355 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms