RNA–Protein interactions for RNA: ENST00000478095.1

HDAC6-222, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-222ENST00000478095 ASB14A6NK59 587 aa11.85□□□□□ -0.51
HDAC6-222ENST00000478095 GCOM1H8Y6P7 765 aaPredicted RBP11.85□□□□□ -0.51
HDAC6-222ENST00000478095 DTNBO60941 627 aa11.85□□□□□ -0.51
HDAC6-222ENST00000478095 LARGE1O95461 756 aa11.85□□□□□ -0.51
HDAC6-222ENST00000478095 SGPL1O95470 568 aa11.85□□□□□ -0.51
HDAC6-222ENST00000478095 TFRCP02786 760 aaKnown RBP11.85□□□□□ -0.51
HDAC6-222ENST00000478095 POLR2MP0CAP2 368 aa11.85□□□□□ -0.51
HDAC6-222ENST00000478095 ZNF865P0CJ78 1059 aaPredicted RBP11.85□□□□□ -0.51
HDAC6-222ENST00000478095 RBM25P49756 843 aaKnown RBP11.85□□□□□ -0.51
HDAC6-222ENST00000478095 IRX5P78411 483 aaPredicted RBP11.85□□□□□ -0.51
HDAC6-222ENST00000478095 TRAF1Q13077 416 aa11.85□□□□□ -0.51
HDAC6-222ENST00000478095 ACVR2BQ13705 512 aa11.85□□□□□ -0.51
HDAC6-222ENST00000478095 PPP2R5BQ15173 497 aa11.85□□□□□ -0.51
HDAC6-222ENST00000478095 FCHSD1Q86WN1 690 aa11.85□□□□□ -0.51
HDAC6-222ENST00000478095 FBXO16Q8IX29 292 aaPredicted RBP11.85□□□□□ -0.51
HDAC6-222ENST00000478095 MSL3Q8N5Y2 521 aaKnown RBP11.85□□□□□ -0.51
HDAC6-222ENST00000478095 ZNF274Q96GC6 653 aaPredicted RBP11.85□□□□□ -0.51
HDAC6-222ENST00000478095 TAAR1Q96RJ0 339 aa11.85□□□□□ -0.51
HDAC6-222ENST00000478095 SLC26A6Q9BXS9 759 aa11.85□□□□□ -0.51
HDAC6-222ENST00000478095 ADD3Q9UEY8 706 aaKnown RBP11.85□□□□□ -0.51
HDAC6-222ENST00000478095 DDX20Q9UHI6 824 aaKnown RBP11.85□□□□□ -0.51
HDAC6-222ENST00000478095 CPLX1O14810 134 aa11.84□□□□□ -0.51
HDAC6-222ENST00000478095 SEPT4O43236 478 aa11.84□□□□□ -0.51
HDAC6-222ENST00000478095 EIF2AK2P19525 551 aaKnown RBP11.84□□□□□ -0.51
HDAC6-222ENST00000478095 HSD17B4P51659 736 aa11.84□□□□□ -0.51
HDAC6-222ENST00000478095 SCRN1Q12765 414 aa11.84□□□□□ -0.51
HDAC6-222ENST00000478095 ANKRD1Q15327 319 aa11.84□□□□□ -0.51
HDAC6-222ENST00000478095 NTRK3Q16288 839 aa11.84□□□□□ -0.51
HDAC6-222ENST00000478095 TYW1BQ6NUM6 668 aa11.84□□□□□ -0.51
HDAC6-222ENST00000478095 MAMSTRQ6ZN01 415 aa11.84□□□□□ -0.51
HDAC6-222ENST00000478095 RMDN3Q96TC7 470 aa11.84□□□□□ -0.51
HDAC6-222ENST00000478095 BACH2Q9BYV9 841 aa11.84□□□□□ -0.51
HDAC6-222ENST00000478095 KATNBL1Q9H079 304 aa11.84□□□□□ -0.51
HDAC6-222ENST00000478095 ALDH8A1Q9H2A2 487 aaPredicted RBP11.84□□□□□ -0.51
HDAC6-222ENST00000478095 SLKQ9H2G2 1235 aaPredicted RBP11.84□□□□□ -0.51
HDAC6-222ENST00000478095 NRBP1Q9UHY1 535 aa11.84□□□□□ -0.51
HDAC6-222ENST00000478095 STXBP3O00186 592 aa11.83□□□□□ -0.52
HDAC6-222ENST00000478095 AKR1A1P14550 325 aa11.83□□□□□ -0.52
HDAC6-222ENST00000478095 IFNAR1P17181 557 aa11.83□□□□□ -0.52
HDAC6-222ENST00000478095 PTGS1P23219 599 aa11.83□□□□□ -0.52
HDAC6-222ENST00000478095 NAPAP54920 295 aa11.83□□□□□ -0.52
HDAC6-222ENST00000478095 AKAP17AQ02040 695 aaKnown RBP11.83□□□□□ -0.52
HDAC6-222ENST00000478095 GHRHRQ02643 423 aa11.83□□□□□ -0.52
HDAC6-222ENST00000478095 PDE4DQ08499 809 aa11.83□□□□□ -0.52
HDAC6-222ENST00000478095 UBE2SQ16763 222 aa11.83□□□□□ -0.52
HDAC6-222ENST00000478095 CCDC144BQ3MJ40 725 aa11.83□□□□□ -0.52
HDAC6-222ENST00000478095 ARHGEF16Q5VV41 709 aa11.83□□□□□ -0.52
HDAC6-222ENST00000478095 USP17L6PQ6QN14 398 aa11.83□□□□□ -0.52
HDAC6-222ENST00000478095 NECAB1Q8N987 351 aa11.83□□□□□ -0.52
HDAC6-222ENST00000478095 DNERQ8NFT8 737 aa11.83□□□□□ -0.52
HDAC6-222ENST00000478095 DIS3LQ8TF46 1054 aaKnown RBP11.83□□□□□ -0.52
HDAC6-222ENST00000478095 TBC1D32Q96NH3 1257 aa11.83□□□□□ -0.52
HDAC6-222ENST00000478095 CRISPLD2Q9H0B8 497 aa11.83□□□□□ -0.52
HDAC6-222ENST00000478095 ABHD16BQ9H3Z7 469 aa11.83□□□□□ -0.52
HDAC6-222ENST00000478095 PSTPIP2Q9H939 334 aa11.83□□□□□ -0.52
HDAC6-222ENST00000478095 PDGFCQ9NRA1 345 aa11.83□□□□□ -0.52
HDAC6-222ENST00000478095 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.82□□□□□ -0.52
HDAC6-222ENST00000478095 MEIS2O14770 477 aa11.82□□□□□ -0.52
HDAC6-222ENST00000478095 ADCY6O43306 1168 aa11.82□□□□□ -0.52
HDAC6-222ENST00000478095 PRPF3O43395 683 aaKnown RBP11.82□□□□□ -0.52
HDAC6-222ENST00000478095 MSCO60682 206 aa11.82□□□□□ -0.52
HDAC6-222ENST00000478095 PFKFB2O60825 505 aa11.82□□□□□ -0.52
HDAC6-222ENST00000478095 FARP2O94887 1054 aaPredicted RBP11.82□□□□□ -0.52
HDAC6-222ENST00000478095 SCG2P13521 617 aa11.82□□□□□ -0.52
HDAC6-222ENST00000478095 EDNRBP24530 442 aa11.82□□□□□ -0.52
HDAC6-222ENST00000478095 ADCYAP1R1P41586 468 aa11.82□□□□□ -0.52
HDAC6-222ENST00000478095 PKN1Q16512 942 aa11.82□□□□□ -0.52
HDAC6-222ENST00000478095 ME3Q16798 604 aa11.82□□□□□ -0.52
HDAC6-222ENST00000478095 PFKFB3Q16875 520 aaPredicted RBP11.82□□□□□ -0.52
HDAC6-222ENST00000478095 IL31RAQ8NI17 732 aa11.82□□□□□ -0.52
HDAC6-222ENST00000478095 SMARCC2Q8TAQ2 1214 aa11.82□□□□□ -0.52
HDAC6-222ENST00000478095 MORC4Q8TE76 937 aa11.82□□□□□ -0.52
HDAC6-222ENST00000478095 NSUN6Q8TEA1 469 aaKnown RBP11.82□□□□□ -0.52
HDAC6-222ENST00000478095 CUL5Q93034 780 aa11.82□□□□□ -0.52
HDAC6-222ENST00000478095 RNF26Q9BY78 433 aaPredicted RBP11.82□□□□□ -0.52
HDAC6-222ENST00000478095 PXMP2Q9NR77 195 aa11.82□□□□□ -0.52
HDAC6-222ENST00000478095 BARHL2Q9NY43 387 aa11.82□□□□□ -0.52
HDAC6-222ENST00000478095 OGDHLQ9ULD0 1010 aa11.82□□□□□ -0.52
HDAC6-222ENST00000478095 FAM184BQ9ULE4 1060 aa11.82□□□□□ -0.52
HDAC6-222ENST00000478095 STK25O00506 426 aa11.81□□□□□ -0.52
HDAC6-222ENST00000478095 PGK1P00558 417 aa11.81□□□□□ -0.52
HDAC6-222ENST00000478095 RARBP10826 455 aa11.81□□□□□ -0.52
HDAC6-222ENST00000478095 MYCLP12524 364 aaPredicted RBP11.81□□□□□ -0.52
HDAC6-222ENST00000478095 ADCY7P51828 1080 aa11.81□□□□□ -0.52
HDAC6-222ENST00000478095 SSRP1Q08945 709 aaKnown RBP11.81□□□□□ -0.52
HDAC6-222ENST00000478095 TMEM63BQ5T3F8 832 aa11.81□□□□□ -0.52
HDAC6-222ENST00000478095 GJC2Q5T442 439 aaPredicted RBP11.81□□□□□ -0.52
HDAC6-222ENST00000478095 CPLX2Q6PUV4 134 aaKnown RBP11.81□□□□□ -0.52
HDAC6-222ENST00000478095 TRIM22Q8IYM9 498 aa11.81□□□□□ -0.52
HDAC6-222ENST00000478095 MPHOSPH6Q99547 160 aaKnown RBP11.81□□□□□ -0.52
HDAC6-222ENST00000478095 PDCD2LQ9BRP1 358 aa11.81□□□□□ -0.52
HDAC6-222ENST00000478095 MAF1Q9H063 256 aa11.81□□□□□ -0.52
HDAC6-222ENST00000478095 VTA1Q9NP79 307 aa11.81□□□□□ -0.52
HDAC6-222ENST00000478095 XPNPEP3Q9NQH7 507 aa11.81□□□□□ -0.52
HDAC6-222ENST00000478095 MAP3K20Q9NYL2 800 aaKnown RBP11.81□□□□□ -0.52
HDAC6-222ENST00000478095 STK24Q9Y6E0 443 aa11.81□□□□□ -0.52
HDAC6-222ENST00000478095 LOC102724159A0A0B4J2E5 919 aa11.8□□□□□ -0.52
HDAC6-222ENST00000478095 SMCO2A6NFE2 343 aa11.8□□□□□ -0.52
HDAC6-222ENST00000478095 hCG_1984214I3L0E3 225 aa11.8□□□□□ -0.52
HDAC6-222ENST00000478095 PIK3CDO00329 1044 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms