RNA–Protein interactions for RNA: ENST00000477605.1

CCM2-209, Transcript of CCM2 scaffold protein, humanhuman

TSL 1 (best)

Gene CCM2, Length 2,050 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-209ENST00000477605 REXO1Q8N1G1 1221 aaKnown RBP20.15■□□□□ 0.82
CCM2-209ENST00000477605 PCMTD1Q96MG8 357 aaPredicted RBP20.15■□□□□ 0.82
CCM2-209ENST00000477605 MTMR9Q96QG7 549 aa20.15■□□□□ 0.82
CCM2-209ENST00000477605 VPS18Q9P253 973 aa20.15■□□□□ 0.82
CCM2-209ENST00000477605 PLAGL2Q9UPG8 496 aa20.15■□□□□ 0.82
CCM2-209ENST00000477605 TULP2O00295 520 aa20.14■□□□□ 0.81
CCM2-209ENST00000477605 GNPATO15228 680 aa20.14■□□□□ 0.81
CCM2-209ENST00000477605 TFRCP02786 760 aaKnown RBP20.14■□□□□ 0.81
CCM2-209ENST00000477605 GOLGA8HP0CJ92 632 aa20.14■□□□□ 0.81
CCM2-209ENST00000477605 PRLRP16471 622 aa20.14■□□□□ 0.81
CCM2-209ENST00000477605 TECP42680 631 aa20.14■□□□□ 0.81
CCM2-209ENST00000477605 ITIH3Q06033 890 aa20.14■□□□□ 0.81
CCM2-209ENST00000477605 GUF1Q8N442 669 aaKnown RBP20.14■□□□□ 0.81
CCM2-209ENST00000477605 TBCKQ8TEA7 893 aa20.14■□□□□ 0.81
CCM2-209ENST00000477605 CCDC42Q96M95 316 aa20.14■□□□□ 0.81
CCM2-209ENST00000477605 MMS19Q96T76 1030 aa20.14■□□□□ 0.81
CCM2-209ENST00000477605 RAB34Q9BZG1 259 aa20.14■□□□□ 0.81
CCM2-209ENST00000477605 EDEM3Q9BZQ6 932 aa20.14■□□□□ 0.81
CCM2-209ENST00000477605 RIOX1Q9H6W3 641 aa20.14■□□□□ 0.81
CCM2-209ENST00000477605 SNED1Q8TER0 1413 aa20.14■□□□□ 0.81
CCM2-209ENST00000477605 MYH8P13535 1937 aa20.14■□□□□ 0.81
CCM2-209ENST00000477605 PSMD2Q13200 908 aa20.14■□□□□ 0.81
CCM2-209ENST00000477605 SLC15A2Q16348 729 aa20.14■□□□□ 0.81
CCM2-209ENST00000477605 ZSCAN26Q16670 478 aa20.14■□□□□ 0.81
CCM2-209ENST00000477605 TMEM266Q2M3C6 531 aa20.14■□□□□ 0.81
CCM2-209ENST00000477605 VWA3BQ502W6 1294 aa20.14■□□□□ 0.81
CCM2-209ENST00000477605 TRIM58Q8NG06 486 aa20.14■□□□□ 0.81
CCM2-209ENST00000477605 STK32BQ9NY57 414 aa20.14■□□□□ 0.81
CCM2-209ENST00000477605 BAZ2BQ9UIF8 2168 aaKnown RBP20.13■□□□□ 0.81
CCM2-209ENST00000477605 RPS6KA5O75582 802 aa20.13■□□□□ 0.81
CCM2-209ENST00000477605 LCA5LO95447 670 aa20.13■□□□□ 0.81
CCM2-209ENST00000477605 ACTN2P35609 894 aa20.13■□□□□ 0.81
CCM2-209ENST00000477605 BTDP43251 543 aa20.13■□□□□ 0.81
CCM2-209ENST00000477605 LRRC63Q05C16 580 aa20.13■□□□□ 0.81
CCM2-209ENST00000477605 KIAA0895Q8NCT3 520 aa20.13■□□□□ 0.81
CCM2-209ENST00000477605 SECISBP2LQ93073 1101 aaKnown RBP20.13■□□□□ 0.81
CCM2-209ENST00000477605 LACRTQ9GZZ8 138 aa20.13■□□□□ 0.81
CCM2-209ENST00000477605 TSPYL1Q9H0U9 437 aa20.13■□□□□ 0.81
CCM2-209ENST00000477605 SEMA6BQ9H3T3 888 aa20.13■□□□□ 0.81
CCM2-209ENST00000477605 JRKLQ9Y4A0 524 aa20.13■□□□□ 0.81
CCM2-209ENST00000477605 ENC1O14682 589 aa20.12■□□□□ 0.81
CCM2-209ENST00000477605 FCER1AP12319 257 aa20.12■□□□□ 0.81
CCM2-209ENST00000477605 LMAN1P49257 510 aa20.12■□□□□ 0.81
CCM2-209ENST00000477605 MAN2A1Q16706 1144 aa20.12■□□□□ 0.81
CCM2-209ENST00000477605 SLC27A3Q5K4L6 730 aa20.12■□□□□ 0.81
CCM2-209ENST00000477605 CCDC70Q6NSX1 233 aa20.12■□□□□ 0.81
CCM2-209ENST00000477605 ZNF572Q7Z3I7 529 aaPredicted RBP20.12■□□□□ 0.81
CCM2-209ENST00000477605 TEX11Q8IYF3 940 aa20.12■□□□□ 0.81
CCM2-209ENST00000477605 HDAC6Q9UBN7 1215 aa20.12■□□□□ 0.81
CCM2-209ENST00000477605 LRWD1Q9UFC0 647 aa20.12■□□□□ 0.81
CCM2-209ENST00000477605 SAP30BPQ9UHR5 308 aaKnown RBP20.12■□□□□ 0.81
CCM2-209ENST00000477605 TACC1O75410 805 aa20.12■□□□□ 0.81
CCM2-209ENST00000477605 GRB10Q13322 594 aa20.12■□□□□ 0.81
CCM2-209ENST00000477605 ARHGEF1Q92888 912 aaKnown RBP20.12■□□□□ 0.81
CCM2-209ENST00000477605 NDST4Q9H3R1 872 aa20.12■□□□□ 0.81
CCM2-209ENST00000477605 SUGCTQ9HAC7 445 aa20.12■□□□□ 0.81
CCM2-209ENST00000477605 RIC8AQ9NPQ8 531 aa20.12■□□□□ 0.81
CCM2-209ENST00000477605 SIK3Q9Y2K2 1263 aa20.12■□□□□ 0.81
CCM2-209ENST00000477605 LY75O60449 1722 aa20.11■□□□□ 0.81
CCM2-209ENST00000477605 NAV1Q8NEY1 1877 aa20.11■□□□□ 0.81
CCM2-209ENST00000477605 IVLP07476 585 aa20.11■□□□□ 0.81
CCM2-209ENST00000477605 IL1R1P14778 569 aa20.11■□□□□ 0.81
CCM2-209ENST00000477605 ATP2B4P23634 1241 aa20.11■□□□□ 0.81
CCM2-209ENST00000477605 KCNQ4P56696 695 aa20.11■□□□□ 0.81
CCM2-209ENST00000477605 SEPT2Q15019 361 aa20.11■□□□□ 0.81
CCM2-209ENST00000477605 GRIK5Q16478 980 aa20.11■□□□□ 0.81
CCM2-209ENST00000477605 CALCRLQ16602 461 aa20.11■□□□□ 0.81
CCM2-209ENST00000477605 USP17L2Q6R6M4 530 aa20.11■□□□□ 0.81
CCM2-209ENST00000477605 PIGSQ96S52 555 aa20.11■□□□□ 0.81
CCM2-209ENST00000477605 PDGFDQ9GZP0 370 aaPredicted RBP20.11■□□□□ 0.81
CCM2-209ENST00000477605 BLOC1S4Q9NUP1 217 aa20.11■□□□□ 0.81
CCM2-209ENST00000477605 MTMR7Q9Y216 660 aa20.11■□□□□ 0.81
CCM2-209ENST00000477605 PLIN4Q96Q06 1357 aa20.11■□□□□ 0.81
CCM2-209ENST00000477605 RCCD1A6NED2 376 aa20.11■□□□□ 0.81
CCM2-209ENST00000477605 LRRIQ3A6PVS8 624 aaPredicted RBP20.11■□□□□ 0.81
CCM2-209ENST00000477605 KLK7P49862 253 aa20.11■□□□□ 0.81
CCM2-209ENST00000477605 ASPRV1Q53RT3 343 aa20.11■□□□□ 0.81
CCM2-209ENST00000477605 PPP1R18Q6NYC8 613 aa20.11■□□□□ 0.81
CCM2-209ENST00000477605 LEKR1Q6ZMV7 388 aa20.11■□□□□ 0.81
CCM2-209ENST00000477605 LARP4BQ92615 738 aaKnown RBP20.11■□□□□ 0.81
CCM2-209ENST00000477605 CCDC102AQ96A19 550 aa20.11■□□□□ 0.81
CCM2-209ENST00000477605 CDK5RAP3Q96JB5 506 aa20.11■□□□□ 0.81
CCM2-209ENST00000477605 FAN1Q9Y2M0 1017 aa20.11■□□□□ 0.81
CCM2-209ENST00000477605 IDEP14735 1019 aa20.1■□□□□ 0.81
CCM2-209ENST00000477605 CCDC24Q8N4L8 307 aa20.1■□□□□ 0.81
CCM2-209ENST00000477605 MMGT1Q8N4V1 131 aa20.1■□□□□ 0.81
CCM2-209ENST00000477605 CEP95Q96GE4 821 aa20.1■□□□□ 0.81
CCM2-209ENST00000477605 CD209Q9NNX6 404 aa20.1■□□□□ 0.81
CCM2-209ENST00000477605 MYMKA6NI61 221 aa20.09■□□□□ 0.81
CCM2-209ENST00000477605 TXKP42681 527 aa20.09■□□□□ 0.81
CCM2-209ENST00000477605 ADCY7P51828 1080 aa20.09■□□□□ 0.81
CCM2-209ENST00000477605 GYS2P54840 703 aa20.09■□□□□ 0.81
CCM2-209ENST00000477605 SMIM5Q71RC9 77 aa20.09■□□□□ 0.81
CCM2-209ENST00000477605 POTEDQ86YR6 584 aa20.09■□□□□ 0.81
CCM2-209ENST00000477605 CAGE1Q8TC20 777 aa20.09■□□□□ 0.81
CCM2-209ENST00000477605 TBC1D22AQ8WUA7 517 aa20.09■□□□□ 0.81
CCM2-209ENST00000477605 PNMA5Q96PV4 448 aa20.09■□□□□ 0.81
CCM2-209ENST00000477605 SLC39A2Q9NP94 309 aa20.09■□□□□ 0.81
CCM2-209ENST00000477605 BIN2Q9UBW5 565 aaPredicted RBP20.09■□□□□ 0.81
CCM2-209ENST00000477605 SNX12Q9UMY4 172 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms