RNA–Protein interactions for RNA: ENST00000477596.1

SF1-214, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 802 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-214ENST00000477596 TM6SF1Q9BZW5 370 aa25.83■■□□□ 1.73
SF1-214ENST00000477596 UPF3AQ9H1J1 476 aaKnown RBP25.83■■□□□ 1.73
SF1-214ENST00000477596 PXMP2Q9NR77 195 aa25.83■■□□□ 1.73
SF1-214ENST00000477596 H0YGN5 161 aa25.82■■□□□ 1.72
SF1-214ENST00000477596 GCOM1H8Y6P7 765 aaPredicted RBP25.82■■□□□ 1.72
SF1-214ENST00000477596 CTAGE5O15320 804 aa25.82■■□□□ 1.72
SF1-214ENST00000477596 EVI5O60447 810 aa25.82■■□□□ 1.72
SF1-214ENST00000477596 C6orf222P0C671 652 aaPredicted RBP25.82■■□□□ 1.72
SF1-214ENST00000477596 POLR2MP0CAP2 368 aa25.82■■□□□ 1.72
SF1-214ENST00000477596 RCAN1P53805 252 aa25.82■■□□□ 1.72
SF1-214ENST00000477596 ARHGEF16Q5VV41 709 aa25.82■■□□□ 1.72
SF1-214ENST00000477596 TLK2Q86UE8 772 aa25.82■■□□□ 1.72
SF1-214ENST00000477596 FCHSD1Q86WN1 690 aa25.82■■□□□ 1.72
SF1-214ENST00000477596 KLHDC9Q8NEP7 349 aa25.82■■□□□ 1.72
SF1-214ENST00000477596 IL31RAQ8NI17 732 aa25.82■■□□□ 1.72
SF1-214ENST00000477596 NID2Q14112 1375 aa25.82■■□□□ 1.72
SF1-214ENST00000477596 GJA9P57773 515 aa25.81■■□□□ 1.72
SF1-214ENST00000477596 BEX3Q00994 111 aa25.81■■□□□ 1.72
SF1-214ENST00000477596 C8orf34Q49A92 452 aa25.81■■□□□ 1.72
SF1-214ENST00000477596 HEATR3Q7Z4Q2 680 aa25.81■■□□□ 1.72
SF1-214ENST00000477596 MPHOSPH6Q99547 160 aaKnown RBP25.81■■□□□ 1.72
SF1-214ENST00000477596 PHF24Q9UPV7 400 aa25.81■■□□□ 1.72
SF1-214ENST00000477596 WWC2Q6AWC2 1192 aa25.8■■□□□ 1.72
SF1-214ENST00000477596 IQSEC1Q6DN90 963 aa25.8■■□□□ 1.72
SF1-214ENST00000477596 CCSAPQ6IQ19 270 aaPredicted RBP25.8■■□□□ 1.72
SF1-214ENST00000477596 WDR11Q9BZH6 1224 aa25.8■■□□□ 1.72
SF1-214ENST00000477596 A0A1W2PQ45 241 aaPredicted RBP25.79■■□□□ 1.72
SF1-214ENST00000477596 A0A1W2PQY0 241 aa25.79■■□□□ 1.72
SF1-214ENST00000477596 RBM47A0AV96 593 aaKnown RBP25.79■■□□□ 1.72
SF1-214ENST00000477596 PPFIA3O75145 1194 aa25.79■■□□□ 1.72
SF1-214ENST00000477596 ARIH2O95376 493 aa25.79■■□□□ 1.72
SF1-214ENST00000477596 CST5P28325 142 aaPredicted RBP25.79■■□□□ 1.72
SF1-214ENST00000477596 KCNA10Q16322 511 aa25.79■■□□□ 1.72
SF1-214ENST00000477596 TYW1BQ6NUM6 668 aa25.79■■□□□ 1.72
SF1-214ENST00000477596 USP17L6PQ6QN14 398 aa25.79■■□□□ 1.72
SF1-214ENST00000477596 COPS5Q92905 334 aa25.79■■□□□ 1.72
SF1-214ENST00000477596 ZFP91Q96JP5 570 aaPredicted RBP25.79■■□□□ 1.72
SF1-214ENST00000477596 PDCD2LQ9BRP1 358 aa25.79■■□□□ 1.72
SF1-214ENST00000477596 NCOA5Q9HCD5 579 aaKnown RBP25.79■■□□□ 1.72
SF1-214ENST00000477596 V9GY48 417 aaPredicted RBP25.79■■□□□ 1.72
SF1-214ENST00000477596 B4DLN1 442 aa25.78■■□□□ 1.72
SF1-214ENST00000477596 DYNC1LI2O43237 492 aaPredicted RBP25.78■■□□□ 1.72
SF1-214ENST00000477596 NR3C2P08235 984 aa25.78■■□□□ 1.72
SF1-214ENST00000477596 PDIA3P30101 505 aaKnown RBP25.78■■□□□ 1.72
SF1-214ENST00000477596 MRPL12P52815 198 aaKnown RBP25.78■■□□□ 1.72
SF1-214ENST00000477596 ACLYP53396 1101 aa25.78■■□□□ 1.72
SF1-214ENST00000477596 EVCP57679 992 aa25.78■■□□□ 1.72
SF1-214ENST00000477596 CCT2P78371 535 aaKnown RBP25.78■■□□□ 1.72
SF1-214ENST00000477596 IWS1Q96ST2 819 aa25.78■■□□□ 1.72
SF1-214ENST00000477596 PDRG1Q9NUG6 133 aa25.78■■□□□ 1.72
SF1-214ENST00000477596 MAP3K20Q9NYL2 800 aaKnown RBP25.78■■□□□ 1.72
SF1-214ENST00000477596 KIAA1217Q5T5P2 1943 aa25.78■■□□□ 1.72
SF1-214ENST00000477596 MEIS2O14770 477 aa25.77■■□□□ 1.72
SF1-214ENST00000477596 MYCLP12524 364 aaPredicted RBP25.77■■□□□ 1.72
SF1-214ENST00000477596 RTP1P59025 263 aa25.77■■□□□ 1.72
SF1-214ENST00000477596 ANAPC15P60006 121 aa25.77■■□□□ 1.72
SF1-214ENST00000477596 PGM5Q15124 567 aa25.77■■□□□ 1.72
SF1-214ENST00000477596 DUSP28Q4G0W2 176 aa25.77■■□□□ 1.72
SF1-214ENST00000477596 SLC39A5Q6ZMH5 540 aa25.77■■□□□ 1.72
SF1-214ENST00000477596 SEPT14Q6ZU15 432 aa25.77■■□□□ 1.72
SF1-214ENST00000477596 SAMD3Q8N6K7 520 aa25.77■■□□□ 1.72
SF1-214ENST00000477596 SPC25Q9HBM1 224 aa25.77■■□□□ 1.72
SF1-214ENST00000477596 ZMYND8Q9ULU4 1186 aaPredicted RBP25.77■■□□□ 1.72
SF1-214ENST00000477596 PPP2R5BQ15173 497 aa25.76■■□□□ 1.71
SF1-214ENST00000477596 STXBP2Q15833 593 aa25.76■■□□□ 1.71
SF1-214ENST00000477596 UBE2SQ16763 222 aa25.76■■□□□ 1.71
SF1-214ENST00000477596 GNASQ5JWF2 1037 aa25.76■■□□□ 1.71
SF1-214ENST00000477596 SCFD2Q8WU76 684 aa25.76■■□□□ 1.71
SF1-214ENST00000477596 TSEN34Q9BSV6 310 aaKnown RBP25.76■■□□□ 1.71
SF1-214ENST00000477596 AP5M1Q9H0R1 490 aa25.76■■□□□ 1.71
SF1-214ENST00000477596 NR2E3Q9Y5X4 410 aa25.76■■□□□ 1.71
SF1-214ENST00000477596 FRMPD4Q14CM0 1322 aa25.75■■□□□ 1.71
SF1-214ENST00000477596 ASGR1P07306 291 aa25.75■■□□□ 1.71
SF1-214ENST00000477596 SYN1P17600 705 aa25.75■■□□□ 1.71
SF1-214ENST00000477596 NKX3-2P78367 333 aa25.75■■□□□ 1.71
SF1-214ENST00000477596 FSCN1Q16658 493 aaKnown RBP25.75■■□□□ 1.71
SF1-214ENST00000477596 TRIM60Q495X7 471 aa25.75■■□□□ 1.71
SF1-214ENST00000477596 SMARCC2Q8TAQ2 1214 aa25.75■■□□□ 1.71
SF1-214ENST00000477596 PHKBQ93100 1093 aa25.75■■□□□ 1.71
SF1-214ENST00000477596 ATP11BQ9Y2G3 1177 aa25.75■■□□□ 1.71
SF1-214ENST00000477596 CCDC196A0A1B0GTZ2 297 aa25.74■■□□□ 1.71
SF1-214ENST00000477596 STXBP3O00186 592 aa25.74■■□□□ 1.71
SF1-214ENST00000477596 RGS20O76081 388 aa25.74■■□□□ 1.71
SF1-214ENST00000477596 TXNP10599 105 aaKnown RBP25.74■■□□□ 1.71
SF1-214ENST00000477596 SNX17Q15036 470 aa25.74■■□□□ 1.71
SF1-214ENST00000477596 NTRK3Q16288 839 aa25.74■■□□□ 1.71
SF1-214ENST00000477596 OR6J1Q8NGC5 347 aa25.74■■□□□ 1.71
SF1-214ENST00000477596 CUL5Q93034 780 aa25.74■■□□□ 1.71
SF1-214ENST00000477596 PSTPIP2Q9H939 334 aa25.74■■□□□ 1.71
SF1-214ENST00000477596 MOXD2PA6NHM9 499 aa25.73■■□□□ 1.71
SF1-214ENST00000477596 PIK3CDO00329 1044 aa25.73■■□□□ 1.71
SF1-214ENST00000477596 NAPAP54920 295 aa25.73■■□□□ 1.71
SF1-214ENST00000477596 STK3Q13188 491 aa25.73■■□□□ 1.71
SF1-214ENST00000477596 LY6KQ17RY6 165 aa25.73■■□□□ 1.71
SF1-214ENST00000477596 CCDC62Q6P9F0 684 aa25.73■■□□□ 1.71
SF1-214ENST00000477596 PCSK9Q8NBP7 692 aaKnown RBP25.73■■□□□ 1.71
SF1-214ENST00000477596 IL17RAQ96F46 866 aa25.73■■□□□ 1.71
SF1-214ENST00000477596 STARD7Q9NQZ5 370 aa25.73■■□□□ 1.71
SF1-214ENST00000477596 Q9Y3F1 56 aa25.73■■□□□ 1.71
SF1-214ENST00000477596 EIF3JO75822 258 aaKnown RBP25.72■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms