RNA–Protein interactions for RNA: ENST00000477563.6

RBBP4-211, Transcript of RB binding protein 4, chromatin remodeling factor, humanhuman

TSL 5

Gene RBBP4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBBP4-211ENST00000477563 PDGFCQ9NRA1 345 aa9.08□□□□□ -0.96
RBBP4-211ENST00000477563 ECHDC1Q9NTX5 307 aa9.08□□□□□ -0.96
RBBP4-211ENST00000477563 RNF146Q9NTX7 359 aa9.08□□□□□ -0.96
RBBP4-211ENST00000477563 POLR3EQ9NVU0 708 aa9.08□□□□□ -0.96
RBBP4-211ENST00000477563 PCDHB15Q9Y5E8 787 aa9.08□□□□□ -0.96
RBBP4-211ENST00000477563 GPAA1O43292 621 aa9.07□□□□□ -0.96
RBBP4-211ENST00000477563 CA3P07451 260 aa9.07□□□□□ -0.96
RBBP4-211ENST00000477563 ZFYP08048 801 aaPredicted RBP9.07□□□□□ -0.96
RBBP4-211ENST00000477563 PSMC6P62333 389 aa9.07□□□□□ -0.96
RBBP4-211ENST00000477563 TAP1Q03518 808 aa9.07□□□□□ -0.96
RBBP4-211ENST00000477563 PTPN11Q06124 597 aaPredicted RBP9.07□□□□□ -0.96
RBBP4-211ENST00000477563 LRRFIP1Q32MZ4 808 aaKnown RBP9.07□□□□□ -0.96
RBBP4-211ENST00000477563 PPP4R3BQ5MIZ7 849 aa9.07□□□□□ -0.96
RBBP4-211ENST00000477563 VARS2Q5ST30 1063 aaKnown RBP9.07□□□□□ -0.96
RBBP4-211ENST00000477563 TMEM63BQ5T3F8 832 aa9.07□□□□□ -0.96
RBBP4-211ENST00000477563 RCSD1Q6JBY9 416 aa9.07□□□□□ -0.96
RBBP4-211ENST00000477563 IFNL3Q8IZI9 196 aa9.07□□□□□ -0.96
RBBP4-211ENST00000477563 LRRC47Q8N1G4 583 aaKnown RBP9.07□□□□□ -0.96
RBBP4-211ENST00000477563 YTHDC1Q96MU7 727 aaKnown RBP9.07□□□□□ -0.96
RBBP4-211ENST00000477563 CRBNQ96SW2 442 aa9.07□□□□□ -0.96
RBBP4-211ENST00000477563 HOMER2Q9NSB8 354 aa9.07□□□□□ -0.96
RBBP4-211ENST00000477563 LMCD1Q9NZU5 365 aa9.07□□□□□ -0.96
RBBP4-211ENST00000477563 TNKSO95271 1327 aa9.06□□□□□ -0.96
RBBP4-211ENST00000477563 SALL3Q9BXA9 1300 aa9.06□□□□□ -0.96
RBBP4-211ENST00000477563 SIP14410 1827 aa9.06□□□□□ -0.96
RBBP4-211ENST00000477563 EPOPA6NHQ4 379 aa9.06□□□□□ -0.96
RBBP4-211ENST00000477563 RFXAPO00287 272 aa9.06□□□□□ -0.96
RBBP4-211ENST00000477563 RNF113AO15541 343 aaKnown RBP9.06□□□□□ -0.96
RBBP4-211ENST00000477563 LPXNO60711 386 aa9.06□□□□□ -0.96
RBBP4-211ENST00000477563 PRDM1O75626 825 aa9.06□□□□□ -0.96
RBBP4-211ENST00000477563 BAIAP3O94812 1187 aa9.06□□□□□ -0.96
RBBP4-211ENST00000477563 IQCF3P0C7M6 154 aa9.06□□□□□ -0.96
RBBP4-211ENST00000477563 TSPY3P0CV98 308 aa9.06□□□□□ -0.96
RBBP4-211ENST00000477563 TSPY8P0CW00 308 aa9.06□□□□□ -0.96
RBBP4-211ENST00000477563 ACTN1P12814 892 aa9.06□□□□□ -0.96
RBBP4-211ENST00000477563 PTGS1P23219 599 aa9.06□□□□□ -0.96
RBBP4-211ENST00000477563 SLC1A4P43007 532 aa9.06□□□□□ -0.96
RBBP4-211ENST00000477563 CPT1AP50416 773 aa9.06□□□□□ -0.96
RBBP4-211ENST00000477563 PDE4BQ07343 736 aa9.06□□□□□ -0.96
RBBP4-211ENST00000477563 MUM1L1Q5H9M0 696 aa9.06□□□□□ -0.96
RBBP4-211ENST00000477563 NFRKBQ6P4R8 1299 aa9.06□□□□□ -0.96
RBBP4-211ENST00000477563 KIAA1211Q6ZU35 1233 aa9.06□□□□□ -0.96
RBBP4-211ENST00000477563 NOL8Q76FK4 1167 aaKnown RBP9.06□□□□□ -0.96
RBBP4-211ENST00000477563 FBXO16Q8IX29 292 aaPredicted RBP9.06□□□□□ -0.96
RBBP4-211ENST00000477563 KHSRPQ92945 711 aaKnown RBP eCLIP9.06□□□□□ -0.962e-10■□□□□ 10.6
RBBP4-211ENST00000477563 HLA-CQ95604 372 aa9.06□□□□□ -0.96
RBBP4-211ENST00000477563 MTG1Q9BT17 334 aaPredicted RBP9.06□□□□□ -0.96
RBBP4-211ENST00000477563 EPHX3Q9H6B9 360 aa9.06□□□□□ -0.96
RBBP4-211ENST00000477563 TRMT13Q9NUP7 481 aaKnown RBP9.06□□□□□ -0.96
RBBP4-211ENST00000477563 PRR12Q9ULL5 1215 aa9.06□□□□□ -0.96
RBBP4-211ENST00000477563 HCN4Q9Y3Q4 1203 aa9.06□□□□□ -0.96
RBBP4-211ENST00000477563 KIAA1217Q5T5P2 1943 aa9.05□□□□□ -0.96
RBBP4-211ENST00000477563 A6NJR5 290 aa9.05□□□□□ -0.96
RBBP4-211ENST00000477563 ZBBXA8MT70 800 aa9.05□□□□□ -0.96
RBBP4-211ENST00000477563 PI4K2BG5E9Z4 385 aa9.05□□□□□ -0.96
RBBP4-211ENST00000477563 NKRFO15226 690 aaKnown RBP eCLIP9.05□□□□□ -0.96
RBBP4-211ENST00000477563 KPNA6O60684 536 aa9.05□□□□□ -0.96
RBBP4-211ENST00000477563 ARHGEF15O94989 841 aa9.05□□□□□ -0.96
RBBP4-211ENST00000477563 ICAM1P05362 532 aa9.05□□□□□ -0.96
RBBP4-211ENST00000477563 CYP2C9P11712 490 aa9.05□□□□□ -0.96
RBBP4-211ENST00000477563 ALAS1P13196 640 aa9.05□□□□□ -0.96
RBBP4-211ENST00000477563 EDNRBP24530 442 aa9.05□□□□□ -0.96
RBBP4-211ENST00000477563 TDO2P48775 406 aa9.05□□□□□ -0.96
RBBP4-211ENST00000477563 ALDH5A1P51649 535 aaPredicted RBP9.05□□□□□ -0.96
RBBP4-211ENST00000477563 TFAP4Q01664 338 aa9.05□□□□□ -0.96
RBBP4-211ENST00000477563 TMEM31Q5JXX7 168 aa9.05□□□□□ -0.96
RBBP4-211ENST00000477563 BTNL9Q6UXG8 535 aa9.05□□□□□ -0.96
RBBP4-211ENST00000477563 HERC6Q8IVU3 1022 aa9.05□□□□□ -0.96
RBBP4-211ENST00000477563 SMC5Q8IY18 1101 aa9.05□□□□□ -0.96
RBBP4-211ENST00000477563 STK11IPQ8N1F8 1099 aa9.05□□□□□ -0.96
RBBP4-211ENST00000477563 RANBP17Q9H2T7 1088 aaKnown RBP9.05□□□□□ -0.96
RBBP4-211ENST00000477563 C11orf16Q9NQ32 467 aa9.05□□□□□ -0.96
RBBP4-211ENST00000477563 IL17RBQ9NRM6 502 aa9.05□□□□□ -0.96
RBBP4-211ENST00000477563 ADD3Q9UEY8 706 aaKnown RBP9.05□□□□□ -0.96
RBBP4-211ENST00000477563 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.05□□□□□ -0.96
RBBP4-211ENST00000477563 DDX49Q9Y6V7 483 aaKnown RBP9.05□□□□□ -0.96
RBBP4-211ENST00000477563 C5orf42Q9H799 3197 aa9.05□□□□□ -0.96
RBBP4-211ENST00000477563 BRWD1Q9NSI6 2320 aa9.04□□□□□ -0.96
RBBP4-211ENST00000477563 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.04□□□□□ -0.96
RBBP4-211ENST00000477563 KIF28PB7ZC32 967 aa9.04□□□□□ -0.96
RBBP4-211ENST00000477563 M0R2C6 588 aa9.04□□□□□ -0.96
RBBP4-211ENST00000477563 MX1P20591 662 aa9.04□□□□□ -0.96
RBBP4-211ENST00000477563 MCCP23508 829 aa9.04□□□□□ -0.96
RBBP4-211ENST00000477563 PPARAQ07869 468 aa9.04□□□□□ -0.96
RBBP4-211ENST00000477563 RBL2Q08999 1139 aa9.04□□□□□ -0.96
RBBP4-211ENST00000477563 MMRN1Q13201 1228 aa9.04□□□□□ -0.96
RBBP4-211ENST00000477563 GRB10Q13322 594 aa9.04□□□□□ -0.96
RBBP4-211ENST00000477563 NBPF20Q3BBV1 942 aa9.04□□□□□ -0.96
RBBP4-211ENST00000477563 EEPD1Q7L9B9 569 aa9.04□□□□□ -0.96
RBBP4-211ENST00000477563 DEFB128Q7Z7B8 93 aa9.04□□□□□ -0.96
RBBP4-211ENST00000477563 SESTD1Q86VW0 696 aa9.04□□□□□ -0.96
RBBP4-211ENST00000477563 MICALL1Q8N3F8 863 aa9.04□□□□□ -0.96
RBBP4-211ENST00000477563 PURBQ96QR8 312 aaKnown RBP9.04□□□□□ -0.96
RBBP4-211ENST00000477563 WDR11Q9BZH6 1224 aa9.04□□□□□ -0.96
RBBP4-211ENST00000477563 NACAP1Q9BZK3 213 aa9.04□□□□□ -0.96
RBBP4-211ENST00000477563 MAF1Q9H063 256 aa9.04□□□□□ -0.96
RBBP4-211ENST00000477563 RWDD1Q9H446 243 aaPredicted RBP9.04□□□□□ -0.96
RBBP4-211ENST00000477563 PIEZO1Q92508 2521 aa9.03□□□□□ -0.96
RBBP4-211ENST00000477563 USP34Q70CQ2 3546 aa9.03□□□□□ -0.96
RBBP4-211ENST00000477563 SMARCA5O60264 1052 aaPredicted RBP9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms