RNA–Protein interactions for RNA: ENST00000477558.1

VPS45-207, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,425 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-207ENST00000477558 PNPLA7Q6ZV29 1317 aa6.82□□□□□ -1.32
VPS45-207ENST00000477558 UTRNP46939 3433 aa6.82□□□□□ -1.32
VPS45-207ENST00000477558 CCER2I3L3R5 266 aa6.82□□□□□ -1.32
VPS45-207ENST00000477558 SLITRK5O94991 958 aa6.82□□□□□ -1.32
VPS45-207ENST00000477558 ATF4P18848 351 aaPredicted RBP6.82□□□□□ -1.32
VPS45-207ENST00000477558 HMGB2P26583 209 aaKnown RBP6.82□□□□□ -1.32
VPS45-207ENST00000477558 SOX9P48436 509 aa6.82□□□□□ -1.32
VPS45-207ENST00000477558 FBXW10Q5XX13 1052 aa6.82□□□□□ -1.32
VPS45-207ENST00000477558 ZNF790Q6PG37 636 aa6.82□□□□□ -1.32
VPS45-207ENST00000477558 MCM10Q7L590 875 aa6.82□□□□□ -1.32
VPS45-207ENST00000477558 LINC00116Q8NCU8 138 aa6.82□□□□□ -1.32
VPS45-207ENST00000477558 BABAM1Q9NWV8 329 aa6.82□□□□□ -1.32
VPS45-207ENST00000477558 KIF13BQ9NQT8 1826 aa6.81□□□□□ -1.32
VPS45-207ENST00000477558 PRR19A6NJB7 356 aa6.81□□□□□ -1.32
VPS45-207ENST00000477558 GSC2O15499 205 aa6.81□□□□□ -1.32
VPS45-207ENST00000477558 LMOD3Q0VAK6 560 aa6.81□□□□□ -1.32
VPS45-207ENST00000477558 SLC39A6Q13433 755 aa6.81□□□□□ -1.32
VPS45-207ENST00000477558 DCTN1Q14203 1278 aa6.81□□□□□ -1.32
VPS45-207ENST00000477558 R3HDM1Q15032 1099 aaKnown RBP6.81□□□□□ -1.32
VPS45-207ENST00000477558 NAALADL2Q58DX5 795 aa6.81□□□□□ -1.32
VPS45-207ENST00000477558 ARSHQ5FYA8 562 aa6.81□□□□□ -1.32
VPS45-207ENST00000477558 CCDC146Q8IYE0 955 aa6.81□□□□□ -1.32
VPS45-207ENST00000477558 MFSD2AQ8NA29 543 aa6.81□□□□□ -1.32
VPS45-207ENST00000477558 ZNF496Q96IT1 587 aaPredicted RBP6.81□□□□□ -1.32
VPS45-207ENST00000477558 SPATA32Q96LK8 384 aa6.81□□□□□ -1.32
VPS45-207ENST00000477558 FERD3LQ96RJ6 166 aa6.81□□□□□ -1.32
VPS45-207ENST00000477558 MIPEPQ99797 713 aa6.81□□□□□ -1.32
VPS45-207ENST00000477558 PDGFDQ9GZP0 370 aaPredicted RBP6.81□□□□□ -1.32
VPS45-207ENST00000477558 ZNRF3Q9ULT6 936 aa6.81□□□□□ -1.32
VPS45-207ENST00000477558 NRXN2Q9P2S2 1712 aa6.81□□□□□ -1.32
VPS45-207ENST00000477558 ZNF521Q96K83 1311 aa6.8□□□□□ -1.32
VPS45-207ENST00000477558 EOMESO95936 686 aa6.8□□□□□ -1.32
VPS45-207ENST00000477558 ZNF853P0CG23 659 aa6.8□□□□□ -1.32
VPS45-207ENST00000477558 RIPK4P57078 832 aa6.8□□□□□ -1.32
VPS45-207ENST00000477558 TEFQ10587 303 aa6.8□□□□□ -1.32
VPS45-207ENST00000477558 OVOS1Q6IE37 1185 aa6.8□□□□□ -1.32
VPS45-207ENST00000477558 FAM214BQ7L5A3 538 aa6.8□□□□□ -1.32
VPS45-207ENST00000477558 CDH24Q86UP0 819 aa6.8□□□□□ -1.32
VPS45-207ENST00000477558 GIMAP7Q8NHV1 300 aa6.8□□□□□ -1.32
VPS45-207ENST00000477558 ATG4CQ96DT6 458 aa6.8□□□□□ -1.32
VPS45-207ENST00000477558 SEC16BQ96JE7 1060 aa6.8□□□□□ -1.32
VPS45-207ENST00000477558 KIF2CQ99661 725 aa6.8□□□□□ -1.32
VPS45-207ENST00000477558 THUMPD2Q9BTF0 503 aaKnown RBP6.8□□□□□ -1.32
VPS45-207ENST00000477558 OSBPL1AQ9BXW6 950 aa6.8□□□□□ -1.32
VPS45-207ENST00000477558 STK32BQ9NY57 414 aa6.8□□□□□ -1.32
VPS45-207ENST00000477558 KIAA1551Q9HCM1 1747 aa6.8□□□□□ -1.32
VPS45-207ENST00000477558 CHL1O00533 1208 aa6.79□□□□□ -1.32
VPS45-207ENST00000477558 APAF1O14727 1248 aa6.79□□□□□ -1.32
VPS45-207ENST00000477558 KCNQ3O43525 872 aa6.79□□□□□ -1.32
VPS45-207ENST00000477558 CYP19A1P11511 503 aaPredicted RBP6.79□□□□□ -1.32
VPS45-207ENST00000477558 YARSP54577 528 aaKnown RBP6.79□□□□□ -1.32
VPS45-207ENST00000477558 GNL2Q13823 731 aaKnown RBP6.79□□□□□ -1.32
VPS45-207ENST00000477558 COL9A2Q14055 689 aaPredicted RBP6.79□□□□□ -1.32
VPS45-207ENST00000477558 TAF7Q15545 349 aaPredicted RBP6.79□□□□□ -1.32
VPS45-207ENST00000477558 DUSP27Q5VZP5 1158 aa6.79□□□□□ -1.32
VPS45-207ENST00000477558 LETMD1Q6P1Q0 360 aa6.79□□□□□ -1.32
VPS45-207ENST00000477558 INTS5Q6P9B9 1019 aaKnown RBP6.79□□□□□ -1.32
VPS45-207ENST00000477558 RUFY4Q6ZNE9 571 aa6.79□□□□□ -1.32
VPS45-207ENST00000477558 SLC51AQ86UW1 340 aa6.79□□□□□ -1.32
VPS45-207ENST00000477558 VPS37DQ86XT2 251 aa6.79□□□□□ -1.32
VPS45-207ENST00000477558 SLFN12Q8IYM2 578 aa6.79□□□□□ -1.32
VPS45-207ENST00000477558 SLC43A3Q8NBI5 491 aa6.79□□□□□ -1.32
VPS45-207ENST00000477558 BAHD1Q8TBE0 780 aaPredicted RBP6.79□□□□□ -1.32
VPS45-207ENST00000477558 PPP1R13LQ8WUF5 828 aa6.79□□□□□ -1.32
VPS45-207ENST00000477558 RTF1Q92541 710 aaKnown RBP6.79□□□□□ -1.32
VPS45-207ENST00000477558 HEXIM2Q96MH2 286 aaKnown RBP6.79□□□□□ -1.32
VPS45-207ENST00000477558 GMIPQ9P107 970 aa6.79□□□□□ -1.32
VPS45-207ENST00000477558 U3KQE9 123 aa6.79□□□□□ -1.32
VPS45-207ENST00000477558 SOS1Q07889 1333 aaPredicted RBP6.78□□□□□ -1.32
VPS45-207ENST00000477558 HYAL3O43820 417 aaPredicted RBP6.78□□□□□ -1.32
VPS45-207ENST00000477558 TGFB1P01137 390 aa6.78□□□□□ -1.32
VPS45-207ENST00000477558 POLR2BP30876 1174 aaKnown RBP6.78□□□□□ -1.32
VPS45-207ENST00000477558 HOXA10P31260 410 aaPredicted RBP6.78□□□□□ -1.32
VPS45-207ENST00000477558 DNAJA1P31689 397 aaKnown RBP6.78□□□□□ -1.32
VPS45-207ENST00000477558 CRKLP46109 303 aaKnown RBP6.78□□□□□ -1.32
VPS45-207ENST00000477558 EIF4A1P60842 406 aaKnown RBP6.78□□□□□ -1.32
VPS45-207ENST00000477558 COL23A1Q86Y22 540 aaPredicted RBP6.78□□□□□ -1.32
VPS45-207ENST00000477558 DNAJC10Q8IXB1 793 aa6.78□□□□□ -1.32
VPS45-207ENST00000477558 NGEFQ8N5V2 710 aa6.78□□□□□ -1.32
VPS45-207ENST00000477558 TMEM40Q8WWA1 233 aa6.78□□□□□ -1.32
VPS45-207ENST00000477558 FMNL2Q96PY5 1086 aa6.78□□□□□ -1.32
VPS45-207ENST00000477558 SRRTQ9BXP5 876 aaKnown RBP6.78□□□□□ -1.32
VPS45-207ENST00000477558 RRP7AQ9Y3A4 280 aaKnown RBP6.78□□□□□ -1.32
VPS45-207ENST00000477558 IL16Q14005 1332 aa6.78□□□□□ -1.32
VPS45-207ENST00000477558 CACNA1FO60840 1977 aa6.78□□□□□ -1.32
VPS45-207ENST00000477558 RPS6KA4O75676 772 aa6.77□□□□□ -1.33
VPS45-207ENST00000477558 CYP27A1Q02318 531 aa6.77□□□□□ -1.33
VPS45-207ENST00000477558 ARID5AQ03989 594 aa6.77□□□□□ -1.33
VPS45-207ENST00000477558 CYP27C1Q4G0S4 372 aa6.77□□□□□ -1.33
VPS45-207ENST00000477558 CDCP2Q5VXM1 449 aa6.77□□□□□ -1.33
VPS45-207ENST00000477558 NLRC3Q7RTR2 1065 aa6.77□□□□□ -1.33
VPS45-207ENST00000477558 LRP10Q7Z4F1 713 aa6.77□□□□□ -1.33
VPS45-207ENST00000477558 PHACTR4Q8IZ21 702 aa6.77□□□□□ -1.33
VPS45-207ENST00000477558 TTC5Q8N0Z6 440 aa6.77□□□□□ -1.33
VPS45-207ENST00000477558 FLAD1Q8NFF5 587 aa6.77□□□□□ -1.33
VPS45-207ENST00000477558 DNAJB8Q8NHS0 232 aa6.77□□□□□ -1.33
VPS45-207ENST00000477558 CYB5D2Q8WUJ1 264 aa6.77□□□□□ -1.33
VPS45-207ENST00000477558 CPLX3Q8WVH0 158 aa6.77□□□□□ -1.33
VPS45-207ENST00000477558 MTFR1LQ9H019 292 aa6.77□□□□□ -1.33
VPS45-207ENST00000477558 CNNM2Q9H8M5 875 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms