RNA–Protein interactions for RNA: ENST00000477335.5

PGK1-204, Transcript of phosphoglycerate kinase 1, humanhuman

TSL 3

Gene PGK1, Length 353 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1-204ENST00000477335 RNF207Q6ZRF8 634 aa10.61□□□□□ -0.71
PGK1-204ENST00000477335 CLEC17AQ6ZS10 378 aa10.61□□□□□ -0.71
PGK1-204ENST00000477335 KRT25Q7Z3Z0 450 aa10.61□□□□□ -0.71
PGK1-204ENST00000477335 SHCBP1Q8NEM2 672 aa10.61□□□□□ -0.71
PGK1-204ENST00000477335 BICD2Q8TD16 824 aa10.61□□□□□ -0.71
PGK1-204ENST00000477335 ZFP91Q96JP5 570 aaPredicted RBP10.61□□□□□ -0.71
PGK1-204ENST00000477335 GDPD2Q9HCC8 539 aa10.61□□□□□ -0.71
PGK1-204ENST00000477335 ZFYVE28Q9HCC9 887 aa10.61□□□□□ -0.71
PGK1-204ENST00000477335 PNMA2Q9UL42 364 aa10.61□□□□□ -0.71
PGK1-204ENST00000477335 DNAJC25-GNG10A0A024R161 153 aa10.6□□□□□ -0.71
PGK1-204ENST00000477335 CCDC194A0A1B0GVG4 234 aa10.6□□□□□ -0.71
PGK1-204ENST00000477335 COBLO75128 1261 aa10.6□□□□□ -0.71
PGK1-204ENST00000477335 TDP2O95551 362 aa10.6□□□□□ -0.71
PGK1-204ENST00000477335 PGK2P07205 417 aa10.6□□□□□ -0.71
PGK1-204ENST00000477335 ATP2B1P20020 1258 aa10.6□□□□□ -0.71
PGK1-204ENST00000477335 SREBF1P36956 1147 aa10.6□□□□□ -0.71
PGK1-204ENST00000477335 CEBPZQ03701 1054 aaKnown RBP10.6□□□□□ -0.71
PGK1-204ENST00000477335 GNL2Q13823 731 aaKnown RBP10.6□□□□□ -0.71
PGK1-204ENST00000477335 NONOQ15233 471 aaKnown RBP eCLIP10.6□□□□□ -0.71
PGK1-204ENST00000477335 PTPAQ15257 358 aa10.6□□□□□ -0.71
PGK1-204ENST00000477335 ZNF174Q15697 407 aa10.6□□□□□ -0.71
PGK1-204ENST00000477335 GPR142Q7Z601 462 aa10.6□□□□□ -0.71
PGK1-204ENST00000477335 MCF2L2Q86YR7 1114 aa10.6□□□□□ -0.71
PGK1-204ENST00000477335 ARHGAP39Q9C0H5 1083 aa10.6□□□□□ -0.71
PGK1-204ENST00000477335 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.6□□□□□ -0.71
PGK1-204ENST00000477335 MYH7BA7E2Y1 1941 aa10.59□□□□□ -0.71
PGK1-204ENST00000477335 SLC37A4O43826 429 aa10.59□□□□□ -0.71
PGK1-204ENST00000477335 EIF2AK2P19525 551 aaKnown RBP10.59□□□□□ -0.71
PGK1-204ENST00000477335 NASPP49321 788 aaPredicted RBP10.59□□□□□ -0.71
PGK1-204ENST00000477335 ARHGAP4P98171 946 aa10.59□□□□□ -0.71
PGK1-204ENST00000477335 SF3A1Q15459 793 aaKnown RBP10.59□□□□□ -0.71
PGK1-204ENST00000477335 TTC38Q5R3I4 469 aa10.59□□□□□ -0.71
PGK1-204ENST00000477335 WDR78Q5VTH9 848 aa10.59□□□□□ -0.71
PGK1-204ENST00000477335 NEK8Q86SG6 692 aa10.59□□□□□ -0.71
PGK1-204ENST00000477335 DNAJC5GQ8N7S2 189 aa10.59□□□□□ -0.71
PGK1-204ENST00000477335 C4orf32Q8N8J7 132 aa10.59□□□□□ -0.71
PGK1-204ENST00000477335 FAM133AQ8N9E0 248 aa10.59□□□□□ -0.71
PGK1-204ENST00000477335 CYP2W1Q8TAV3 490 aa10.59□□□□□ -0.71
PGK1-204ENST00000477335 LEO1Q8WVC0 666 aaPredicted RBP10.59□□□□□ -0.71
PGK1-204ENST00000477335 LENG9Q96B70 501 aa10.59□□□□□ -0.71
PGK1-204ENST00000477335 MMP19Q99542 508 aa10.59□□□□□ -0.71
PGK1-204ENST00000477335 CFHR5Q9BXR6 569 aa10.59□□□□□ -0.71
PGK1-204ENST00000477335 GLT8D2Q9H1C3 349 aa10.59□□□□□ -0.71
PGK1-204ENST00000477335 TMEM60Q9H2L4 133 aa10.59□□□□□ -0.71
PGK1-204ENST00000477335 MROH8Q9H579 483 aa10.59□□□□□ -0.71
PGK1-204ENST00000477335 PXMP2Q9NR77 195 aa10.59□□□□□ -0.71
PGK1-204ENST00000477335 RTEL1Q9NZ71 1219 aa10.59□□□□□ -0.71
PGK1-204ENST00000477335 FBXO40Q9UH90 709 aa10.59□□□□□ -0.71
PGK1-204ENST00000477335 LRRC37A2A6NM11 1700 aa10.58□□□□□ -0.72
PGK1-204ENST00000477335 PLXNB2O15031 1838 aa10.58□□□□□ -0.72
PGK1-204ENST00000477335 SPDYE3A6NKU9 549 aa10.58□□□□□ -0.72
PGK1-204ENST00000477335 FAM86B1E9PN63 330 aa10.58□□□□□ -0.72
PGK1-204ENST00000477335 FIBPO43427 364 aa10.58□□□□□ -0.72
PGK1-204ENST00000477335 TRPA1O75762 1119 aa10.58□□□□□ -0.72
PGK1-204ENST00000477335 ALDH1A1P00352 501 aa10.58□□□□□ -0.72
PGK1-204ENST00000477335 FOSP01100 380 aaPredicted RBP10.58□□□□□ -0.72
PGK1-204ENST00000477335 FAM86B2P0C5J1 330 aa10.58□□□□□ -0.72
PGK1-204ENST00000477335 PTPREP23469 700 aa10.58□□□□□ -0.72
PGK1-204ENST00000477335 ADORA2AP29274 412 aa10.58□□□□□ -0.72
PGK1-204ENST00000477335 MCM7P33993 719 aa10.58□□□□□ -0.72
PGK1-204ENST00000477335 COPB2P35606 906 aa10.58□□□□□ -0.72
PGK1-204ENST00000477335 MRPS9P82933 396 aaKnown RBP10.58□□□□□ -0.72
PGK1-204ENST00000477335 GRIN1Q05586 938 aa10.58□□□□□ -0.72
PGK1-204ENST00000477335 GRB14Q14449 540 aa10.58□□□□□ -0.72
PGK1-204ENST00000477335 IL17AQ16552 155 aa10.58□□□□□ -0.72
PGK1-204ENST00000477335 LETM2Q2VYF4 491 aa10.58□□□□□ -0.72
PGK1-204ENST00000477335 RILPL1Q5EBL4 403 aa10.58□□□□□ -0.72
PGK1-204ENST00000477335 ANO1Q5XXA6 986 aa10.58□□□□□ -0.72
PGK1-204ENST00000477335 TEX2Q8IWB9 1127 aa10.58□□□□□ -0.72
PGK1-204ENST00000477335 ANKRD35Q8N283 1001 aa10.58□□□□□ -0.72
PGK1-204ENST00000477335 SAMD3Q8N6K7 520 aa10.58□□□□□ -0.72
PGK1-204ENST00000477335 LINC00301Q8NCQ3 95 aa10.58□□□□□ -0.72
PGK1-204ENST00000477335 GJA10Q969M2 543 aa10.58□□□□□ -0.72
PGK1-204ENST00000477335 MBOAT7Q96N66 472 aa10.58□□□□□ -0.72
PGK1-204ENST00000477335 UIMC1Q96RL1 719 aa10.58□□□□□ -0.72
PGK1-204ENST00000477335 PDCD2LQ9BRP1 358 aa10.58□□□□□ -0.72
PGK1-204ENST00000477335 MAP3K20Q9NYL2 800 aaKnown RBP10.58□□□□□ -0.72
PGK1-204ENST00000477335 PFASO15067 1338 aa10.58□□□□□ -0.72
PGK1-204ENST00000477335 ZNF236Q9UL36 1845 aa10.57□□□□□ -0.72
PGK1-204ENST00000477335 IGLV3-22A0A075B6J6 115 aa10.57□□□□□ -0.72
PGK1-204ENST00000477335 CYP3A7-CYP3A51PA0A087WV96 503 aa10.57□□□□□ -0.72
PGK1-204ENST00000477335 POTEB2H3BUK9 544 aa10.57□□□□□ -0.72
PGK1-204ENST00000477335 CYP3A4P08684 503 aa10.57□□□□□ -0.72
PGK1-204ENST00000477335 FCER1AP12319 257 aa10.57□□□□□ -0.72
PGK1-204ENST00000477335 NCLP19338 710 aaKnown RBP10.57□□□□□ -0.72
PGK1-204ENST00000477335 CYP3A7P24462 503 aa10.57□□□□□ -0.72
PGK1-204ENST00000477335 EDNRBP24530 442 aa10.57□□□□□ -0.72
PGK1-204ENST00000477335 CIITAP33076 1130 aa10.57□□□□□ -0.72
PGK1-204ENST00000477335 TRAPPC10P48553 1259 aa10.57□□□□□ -0.72
PGK1-204ENST00000477335 ALDH5A1P51649 535 aaPredicted RBP10.57□□□□□ -0.72
PGK1-204ENST00000477335 CCNA1P78396 465 aa10.57□□□□□ -0.72
PGK1-204ENST00000477335 PGM5Q15124 567 aa10.57□□□□□ -0.72
PGK1-204ENST00000477335 ZNF792Q3KQV3 632 aa10.57□□□□□ -0.72
PGK1-204ENST00000477335 MORN1Q5T089 497 aa10.57□□□□□ -0.72
PGK1-204ENST00000477335 PLEKHH3Q7Z736 793 aa10.57□□□□□ -0.72
PGK1-204ENST00000477335 NPLOC4Q8TAT6 608 aa10.57□□□□□ -0.72
PGK1-204ENST00000477335 USP6NLQ92738 828 aa10.57□□□□□ -0.72
PGK1-204ENST00000477335 TRIM47Q96LD4 638 aa10.57□□□□□ -0.72
PGK1-204ENST00000477335 ZNF396Q96N95 335 aaPredicted RBP10.57□□□□□ -0.72
PGK1-204ENST00000477335 PHF12Q96QT6 1004 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms