RNA–Protein interactions for RNA: ENST00000476701.5

SDK1-206, Transcript of sidekick cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene SDK1, Length 3,113 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDK1-206ENST00000476701 TUBB2AQ13885 445 aa13.37□□□□□ -0.27
SDK1-206ENST00000476701 WDR93Q6P2C0 686 aa13.37□□□□□ -0.27
SDK1-206ENST00000476701 ZNF444Q8N0Y2 327 aaPredicted RBP13.37□□□□□ -0.27
SDK1-206ENST00000476701 SH3RF3Q8TEJ3 882 aaPredicted RBP13.37□□□□□ -0.27
SDK1-206ENST00000476701 TUBB2BQ9BVA1 445 aa13.37□□□□□ -0.27
SDK1-206ENST00000476701 GOLGA6AQ9NYA3 693 aa13.37□□□□□ -0.27
SDK1-206ENST00000476701 SALL4Q9UJQ4 1053 aa13.37□□□□□ -0.27
SDK1-206ENST00000476701 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.37□□□□□ -0.27
SDK1-206ENST00000476701 PDS5AQ29RF7 1337 aaKnown RBP13.37□□□□□ -0.27
SDK1-206ENST00000476701 TOGARAM1Q9Y4F4 1720 aa13.37□□□□□ -0.27
SDK1-206ENST00000476701 AGPSO00116 658 aa13.37□□□□□ -0.27
SDK1-206ENST00000476701 EEF1GP26641 437 aaKnown RBP13.37□□□□□ -0.27
SDK1-206ENST00000476701 CACNB1Q02641 598 aaPredicted RBP13.37□□□□□ -0.27
SDK1-206ENST00000476701 MAP9Q49MG5 647 aa13.37□□□□□ -0.27
SDK1-206ENST00000476701 SWT1Q5T5J6 900 aaKnown RBP13.37□□□□□ -0.27
SDK1-206ENST00000476701 CCNI2Q6ZMN8 369 aaPredicted RBP13.37□□□□□ -0.27
SDK1-206ENST00000476701 GIMAP8Q8ND71 665 aaPredicted RBP13.37□□□□□ -0.27
SDK1-206ENST00000476701 TRIM9Q9C026 710 aa13.37□□□□□ -0.27
SDK1-206ENST00000476701 SRP68Q9UHB9 627 aaKnown RBP13.37□□□□□ -0.27
SDK1-206ENST00000476701 MYH13Q9UKX3 1938 aa13.37□□□□□ -0.27
SDK1-206ENST00000476701 STRCQ7RTU9 1775 aa13.37□□□□□ -0.27
SDK1-206ENST00000476701 UBR2Q8IWV8 1755 aa13.37□□□□□ -0.27
SDK1-206ENST00000476701 KLRF2D3W0D1 207 aa13.37□□□□□ -0.27
SDK1-206ENST00000476701 ZEB2O60315 1214 aa13.37□□□□□ -0.27
SDK1-206ENST00000476701 TRAPPC10P48553 1259 aa13.37□□□□□ -0.27
SDK1-206ENST00000476701 LIG3P49916 1009 aa13.37□□□□□ -0.27
SDK1-206ENST00000476701 CENPHQ9H3R5 247 aa13.37□□□□□ -0.27
SDK1-206ENST00000476701 ARHGAP20Q9P2F6 1191 aa13.37□□□□□ -0.27
SDK1-206ENST00000476701 POTEMA6NI47 508 aa13.36□□□□□ -0.27
SDK1-206ENST00000476701 PAPD7Q5XG87 772 aaKnown RBP13.36□□□□□ -0.27
SDK1-206ENST00000476701 POTEDQ86YR6 584 aa13.36□□□□□ -0.27
SDK1-206ENST00000476701 CLEC10AQ8IUN9 316 aa13.36□□□□□ -0.27
SDK1-206ENST00000476701 MICALL1Q8N3F8 863 aa13.36□□□□□ -0.27
SDK1-206ENST00000476701 SEMA6BQ9H3T3 888 aa13.36□□□□□ -0.27
SDK1-206ENST00000476701 SHANK3Q9BYB0 1731 aa13.36□□□□□ -0.27
SDK1-206ENST00000476701 SMCO2A6NFE2 343 aa13.36□□□□□ -0.27
SDK1-206ENST00000476701 GUCY2FP51841 1108 aa13.36□□□□□ -0.27
SDK1-206ENST00000476701 ZBED6P86452 979 aa13.36□□□□□ -0.27
SDK1-206ENST00000476701 UBE4AQ14139 1066 aa13.36□□□□□ -0.27
SDK1-206ENST00000476701 PARP10Q53GL7 1025 aa13.36□□□□□ -0.27
SDK1-206ENST00000476701 ARL6IP4Q66PJ3 421 aaKnown RBP13.36□□□□□ -0.27
SDK1-206ENST00000476701 KIAA0895Q8NCT3 520 aa13.36□□□□□ -0.27
SDK1-206ENST00000476701 FAM76AQ8TAV0 307 aa13.36□□□□□ -0.27
SDK1-206ENST00000476701 MTA3Q9BTC8 594 aa13.36□□□□□ -0.27
SDK1-206ENST00000476701 FAM107BQ9H098 131 aa13.36□□□□□ -0.27
SDK1-206ENST00000476701 ZHX3Q9H4I2 956 aa13.36□□□□□ -0.27
SDK1-206ENST00000476701 THAP9Q9H5L6 903 aa13.36□□□□□ -0.27
SDK1-206ENST00000476701 MAD2L2Q9UI95 211 aa13.36□□□□□ -0.27
SDK1-206ENST00000476701 PCDHA13Q9Y5I0 950 aa13.36□□□□□ -0.27
SDK1-206ENST00000476701 FRMPD2Q68DX3 1309 aaPredicted RBP13.36□□□□□ -0.27
SDK1-206ENST00000476701 PARP4Q9UKK3 1724 aaKnown RBP13.36□□□□□ -0.27
SDK1-206ENST00000476701 EP400Q96L91 3159 aa13.35□□□□□ -0.27
SDK1-206ENST00000476701 PRPF6O94906 941 aaKnown RBP13.35□□□□□ -0.27
SDK1-206ENST00000476701 SCP2P22307 547 aa13.35□□□□□ -0.27
SDK1-206ENST00000476701 KIF11P52732 1056 aa13.35□□□□□ -0.27
SDK1-206ENST00000476701 CORO7P57737 925 aa13.35□□□□□ -0.27
SDK1-206ENST00000476701 MIIPQ5JXC2 388 aa13.35□□□□□ -0.27
SDK1-206ENST00000476701 CACNA2D4Q7Z3S7 1137 aa13.35□□□□□ -0.27
SDK1-206ENST00000476701 ARL8AQ96BM9 186 aa13.35□□□□□ -0.27
SDK1-206ENST00000476701 GOLPH3Q9H4A6 298 aa13.35□□□□□ -0.27
SDK1-206ENST00000476701 KBTBD4Q9NVX7 518 aa13.35□□□□□ -0.27
SDK1-206ENST00000476701 ANKIB1Q9P2G1 1089 aa13.35□□□□□ -0.27
SDK1-206ENST00000476701 ZNF804BA4D1E1 1349 aa13.35□□□□□ -0.27
SDK1-206ENST00000476701 LRRC53A6NM62 1247 aa13.35□□□□□ -0.27
SDK1-206ENST00000476701 RHOBTB3O94955 611 aa13.35□□□□□ -0.27
SDK1-206ENST00000476701 FTCDO95954 541 aa13.35□□□□□ -0.27
SDK1-206ENST00000476701 KRT14P02533 472 aa13.35□□□□□ -0.27
SDK1-206ENST00000476701 CCNE1P24864 410 aa13.35□□□□□ -0.27
SDK1-206ENST00000476701 RPS8P62241 208 aaKnown RBP13.35□□□□□ -0.27
SDK1-206ENST00000476701 CKAP4Q07065 602 aaKnown RBP13.35□□□□□ -0.27
SDK1-206ENST00000476701 TRADDQ15628 312 aa13.35□□□□□ -0.27
SDK1-206ENST00000476701 CREG2Q8IUH2 290 aa13.35□□□□□ -0.27
SDK1-206ENST00000476701 SUGP1Q8IWZ8 645 aaKnown RBP13.35□□□□□ -0.27
SDK1-206ENST00000476701 TSEN2Q8NCE0 465 aaKnown RBP13.35□□□□□ -0.27
SDK1-206ENST00000476701 TBCKQ8TEA7 893 aa13.35□□□□□ -0.27
SDK1-206ENST00000476701 TMEM47Q9BQJ4 181 aa13.35□□□□□ -0.27
SDK1-206ENST00000476701 NUP98P52948 1817 aa13.35□□□□□ -0.27
SDK1-206ENST00000476701 RPS6KA5O75582 802 aa13.35□□□□□ -0.27
SDK1-206ENST00000476701 MAGEA1P43355 309 aa13.35□□□□□ -0.27
SDK1-206ENST00000476701 ZKSCAN8Q15776 578 aaPredicted RBP13.35□□□□□ -0.27
SDK1-206ENST00000476701 DDB1Q16531 1140 aa13.35□□□□□ -0.27
SDK1-206ENST00000476701 TBC1D9BQ66K14 1250 aa13.35□□□□□ -0.27
SDK1-206ENST00000476701 NELFCDQ8IXH7 590 aa13.35□□□□□ -0.27
SDK1-206ENST00000476701 SPATA4Q8NEY3 305 aa13.35□□□□□ -0.27
SDK1-206ENST00000476701 BCAS4Q8TDM0 211 aa13.35□□□□□ -0.27
SDK1-206ENST00000476701 COA7Q96BR5 231 aa13.35□□□□□ -0.27
SDK1-206ENST00000476701 NUDT12Q9BQG2 462 aa13.35□□□□□ -0.27
SDK1-206ENST00000476701 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.35□□□□□ -0.27
SDK1-206ENST00000476701 A0A1W2PQC6 194 aa13.34□□□□□ -0.27
SDK1-206ENST00000476701 TACC1O75410 805 aa13.34□□□□□ -0.27
SDK1-206ENST00000476701 OR52Z1P0C646 297 aa13.34□□□□□ -0.27
SDK1-206ENST00000476701 VAV2P52735 878 aa13.34□□□□□ -0.27
SDK1-206ENST00000476701 TUBB4BP68371 445 aa13.34□□□□□ -0.27
SDK1-206ENST00000476701 MMS22LQ6ZRQ5 1243 aa13.34□□□□□ -0.27
SDK1-206ENST00000476701 OTUD6BQ8N6M0 293 aa13.34□□□□□ -0.27
SDK1-206ENST00000476701 CCDC47Q96A33 483 aaKnown RBP13.34□□□□□ -0.27
SDK1-206ENST00000476701 CDK5RAP3Q96JB5 506 aa13.34□□□□□ -0.27
SDK1-206ENST00000476701 TTYH3Q9C0H2 523 aa13.34□□□□□ -0.27
SDK1-206ENST00000476701 BSDC1Q9NW68 430 aaPredicted RBP13.34□□□□□ -0.27
SDK1-206ENST00000476701 MYH3P11055 1940 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms