RNA–Protein interactions for RNA: ENST00000476169.1

VPS13D-207, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-207ENST00000476169 FKTNO75072 461 aa5.39□□□□□ -1.55
VPS13D-207ENST00000476169 PPFIA4O75335 1185 aa5.39□□□□□ -1.55
VPS13D-207ENST00000476169 EYA4O95677 639 aa5.39□□□□□ -1.55
VPS13D-207ENST00000476169 TPP2P29144 1249 aaPredicted RBP5.39□□□□□ -1.55
VPS13D-207ENST00000476169 TESK1Q15569 626 aa5.39□□□□□ -1.55
VPS13D-207ENST00000476169 ZRSR2Q15696 482 aaKnown RBP5.39□□□□□ -1.55
VPS13D-207ENST00000476169 NKPD1Q17RQ9 610 aa5.39□□□□□ -1.55
VPS13D-207ENST00000476169 PIK3R6Q5UE93 754 aa5.39□□□□□ -1.55
VPS13D-207ENST00000476169 ZCCHC8Q6NZY4 707 aaKnown RBP5.39□□□□□ -1.55
VPS13D-207ENST00000476169 DDX53Q86TM3 631 aaKnown RBP5.39□□□□□ -1.55
VPS13D-207ENST00000476169 LINC00116Q8NCU8 138 aa5.39□□□□□ -1.55
VPS13D-207ENST00000476169 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.39□□□□□ -1.55
VPS13D-207ENST00000476169 DCAF5Q96JK2 942 aa5.39□□□□□ -1.55
VPS13D-207ENST00000476169 HSPA12BQ96MM6 686 aa5.39□□□□□ -1.55
VPS13D-207ENST00000476169 DBNDD2Q9BQY9 259 aa5.39□□□□□ -1.55
VPS13D-207ENST00000476169 METTL22Q9BUU2 404 aaPredicted RBP5.39□□□□□ -1.55
VPS13D-207ENST00000476169 OSBPL1AQ9BXW6 950 aa5.39□□□□□ -1.55
VPS13D-207ENST00000476169 FOXP3Q9BZS1 431 aa5.39□□□□□ -1.55
VPS13D-207ENST00000476169 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.39□□□□□ -1.55
VPS13D-207ENST00000476169 LRRC4CQ9HCJ2 640 aa5.39□□□□□ -1.55
VPS13D-207ENST00000476169 ZSWIM5Q9P217 1185 aa5.39□□□□□ -1.55
VPS13D-207ENST00000476169 TCFL5Q9UL49 500 aa5.39□□□□□ -1.55
VPS13D-207ENST00000476169 PCDHA8Q9Y5H6 950 aa5.39□□□□□ -1.55
VPS13D-207ENST00000476169 NPFFR2Q9Y5X5 522 aa5.39□□□□□ -1.55
VPS13D-207ENST00000476169 U3KQE9 123 aa5.39□□□□□ -1.55
VPS13D-207ENST00000476169 NPHP3-ACAD11A0A0J9YXS1 232 aa5.38□□□□□ -1.55
VPS13D-207ENST00000476169 GOLGA6CA6NDK9 693 aa5.38□□□□□ -1.55
VPS13D-207ENST00000476169 GOLGA6BA6NDN3 693 aa5.38□□□□□ -1.55
VPS13D-207ENST00000476169 WASH4PA8MWX3 477 aa5.38□□□□□ -1.55
VPS13D-207ENST00000476169 WDR64B1ANS9 1081 aa5.38□□□□□ -1.55
VPS13D-207ENST00000476169 WDHD1O75717 1129 aaPredicted RBP5.38□□□□□ -1.55
VPS13D-207ENST00000476169 CEACAM5P06731 702 aa5.38□□□□□ -1.55
VPS13D-207ENST00000476169 CENPBP07199 599 aaPredicted RBP5.38□□□□□ -1.55
VPS13D-207ENST00000476169 GOLGA6DP0CG33 693 aa5.38□□□□□ -1.55
VPS13D-207ENST00000476169 PAMP19021 973 aa5.38□□□□□ -1.55
VPS13D-207ENST00000476169 LTKP29376 864 aa5.38□□□□□ -1.55
VPS13D-207ENST00000476169 PDE6BP35913 854 aa5.38□□□□□ -1.55
VPS13D-207ENST00000476169 CLCN7P51798 805 aa5.38□□□□□ -1.55
VPS13D-207ENST00000476169 NFIAQ12857 509 aa5.38□□□□□ -1.55
VPS13D-207ENST00000476169 PIN1Q13526 163 aaPredicted RBP5.38□□□□□ -1.55
VPS13D-207ENST00000476169 MTMR1Q13613 665 aa5.38□□□□□ -1.55
VPS13D-207ENST00000476169 HLTFQ14527 1009 aaKnown RBP eCLIP5.38□□□□□ -1.55
VPS13D-207ENST00000476169 MLC1Q15049 377 aa5.38□□□□□ -1.55
VPS13D-207ENST00000476169 RTP2Q5QGT7 225 aa5.38□□□□□ -1.55
VPS13D-207ENST00000476169 SPTY2D1Q68D10 685 aaPredicted RBP5.38□□□□□ -1.55
VPS13D-207ENST00000476169 IQCEQ6IPM2 695 aa5.38□□□□□ -1.55
VPS13D-207ENST00000476169 RNF111Q6ZNA4 994 aa5.38□□□□□ -1.55
VPS13D-207ENST00000476169 NECAB2Q7Z6G3 386 aa5.38□□□□□ -1.55
VPS13D-207ENST00000476169 THAP5Q7Z6K1 395 aa5.38□□□□□ -1.55
VPS13D-207ENST00000476169 PASD1Q8IV76 773 aa5.38□□□□□ -1.55
VPS13D-207ENST00000476169 CCDC103Q8IW40 242 aa5.38□□□□□ -1.55
VPS13D-207ENST00000476169 ZC3H7AQ8IWR0 971 aaKnown RBP5.38□□□□□ -1.55
VPS13D-207ENST00000476169 SPACA3Q8IXA5 215 aa5.38□□□□□ -1.55
VPS13D-207ENST00000476169 SAMD3Q8N6K7 520 aa5.38□□□□□ -1.55
VPS13D-207ENST00000476169 USHBP1Q8N6Y0 703 aa5.38□□□□□ -1.55
VPS13D-207ENST00000476169 OR2W6PQ8NHA6 318 aa5.38□□□□□ -1.55
VPS13D-207ENST00000476169 TTC8Q8TAM2 541 aa5.38□□□□□ -1.55
VPS13D-207ENST00000476169 USP7Q93009 1102 aa5.38□□□□□ -1.55
VPS13D-207ENST00000476169 UBE2FQ969M7 185 aa5.38□□□□□ -1.55
VPS13D-207ENST00000476169 HOOK2Q96ED9 719 aa5.38□□□□□ -1.55
VPS13D-207ENST00000476169 WNK4Q96J92 1243 aa5.38□□□□□ -1.55
VPS13D-207ENST00000476169 YIPF4Q9BSR8 244 aa5.38□□□□□ -1.55
VPS13D-207ENST00000476169 ALG1Q9BT22 464 aa5.38□□□□□ -1.55
VPS13D-207ENST00000476169 CDADC1Q9BWV3 514 aa5.38□□□□□ -1.55
VPS13D-207ENST00000476169 CCDC8Q9H0W5 538 aaPredicted RBP5.38□□□□□ -1.55
VPS13D-207ENST00000476169 MKNK2Q9HBH9 465 aa5.38□□□□□ -1.55
VPS13D-207ENST00000476169 AP5S1Q9NUS5 200 aa5.38□□□□□ -1.55
VPS13D-207ENST00000476169 GOLGA6AQ9NYA3 693 aa5.38□□□□□ -1.55
VPS13D-207ENST00000476169 SAMD15Q9P1V8 674 aa5.38□□□□□ -1.55
VPS13D-207ENST00000476169 DUSP13Q9UII6 198 aa5.38□□□□□ -1.55
VPS13D-207ENST00000476169 TRBV23OR9-2A0A075B6M9 112 aa5.37□□□□□ -1.55
VPS13D-207ENST00000476169 CCDC189A1A4V9 331 aa5.37□□□□□ -1.55
VPS13D-207ENST00000476169 ARVCFO00192 962 aa5.37□□□□□ -1.55
VPS13D-207ENST00000476169 ARNTLO00327 626 aa5.37□□□□□ -1.55
VPS13D-207ENST00000476169 BRINP1O60477 761 aa5.37□□□□□ -1.55
VPS13D-207ENST00000476169 MSCO60682 206 aa5.37□□□□□ -1.55
VPS13D-207ENST00000476169 FOSP01100 380 aaPredicted RBP5.37□□□□□ -1.55
VPS13D-207ENST00000476169 CT47B1P0C2W7 299 aaPredicted RBP5.37□□□□□ -1.55
VPS13D-207ENST00000476169 LCP1P13796 627 aa5.37□□□□□ -1.55
VPS13D-207ENST00000476169 ENDOUP21128 410 aaKnown RBP5.37□□□□□ -1.55
VPS13D-207ENST00000476169 SCNN1BP51168 640 aa5.37□□□□□ -1.55
VPS13D-207ENST00000476169 TMPRSS15P98073 1019 aa5.37□□□□□ -1.55
VPS13D-207ENST00000476169 PAK1Q13153 545 aa5.37□□□□□ -1.55
VPS13D-207ENST00000476169 DHX8Q14562 1220 aaKnown RBP5.37□□□□□ -1.55
VPS13D-207ENST00000476169 STAT4Q14765 748 aa5.37□□□□□ -1.55
VPS13D-207ENST00000476169 GAB4Q2WGN9 574 aa5.37□□□□□ -1.55
VPS13D-207ENST00000476169 ZFYVE27Q5T4F4 411 aa5.37□□□□□ -1.55
VPS13D-207ENST00000476169 RNF219Q5W0B1 726 aaPredicted RBP5.37□□□□□ -1.55
VPS13D-207ENST00000476169 ABHD17CQ6PCB6 329 aa5.37□□□□□ -1.55
VPS13D-207ENST00000476169 LBX2Q6XYB7 198 aa5.37□□□□□ -1.55
VPS13D-207ENST00000476169 LHFPL2Q6ZUX7 228 aa5.37□□□□□ -1.55
VPS13D-207ENST00000476169 C11orf96Q7Z7L8 435 aa5.37□□□□□ -1.55
VPS13D-207ENST00000476169 ANKLE2Q86XL3 938 aa5.37□□□□□ -1.55
VPS13D-207ENST00000476169 NAT16Q8N8M0 369 aa5.37□□□□□ -1.55
VPS13D-207ENST00000476169 IGSF22Q8N9C0 903 aa5.37□□□□□ -1.55
VPS13D-207ENST00000476169 RCBTB1Q8NDN9 531 aa5.37□□□□□ -1.55
VPS13D-207ENST00000476169 SHKBP1Q8TBC3 707 aa5.37□□□□□ -1.55
VPS13D-207ENST00000476169 PI4K2BQ8TCG2 481 aa5.37□□□□□ -1.55
VPS13D-207ENST00000476169 IL17RAQ96F46 866 aa5.37□□□□□ -1.55
VPS13D-207ENST00000476169 PTCHD1Q96NR3 888 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms