RNA–Protein interactions for RNA: ENST00000475605.1

CDPF1-206, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

TSL 2

Gene CDPF1, Length 655 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-206ENST00000475605 ARIH2O95376 493 aa18.48■□□□□ 0.55
CDPF1-206ENST00000475605 GOLGA8HP0CJ92 632 aa18.48■□□□□ 0.55
CDPF1-206ENST00000475605 SNHG28P0DPA3 235 aa18.48■□□□□ 0.55
CDPF1-206ENST00000475605 EDNRBP24530 442 aa18.48■□□□□ 0.55
CDPF1-206ENST00000475605 TFF2Q03403 129 aa18.48■□□□□ 0.55
CDPF1-206ENST00000475605 USH1GQ495M9 461 aa18.48■□□□□ 0.55
CDPF1-206ENST00000475605 TMEM67Q5HYA8 995 aa18.48■□□□□ 0.55
CDPF1-206ENST00000475605 CHD7Q9P2D1 2997 aa18.47■□□□□ 0.55
CDPF1-206ENST00000475605 NKRFO15226 690 aaKnown RBP eCLIP18.47■□□□□ 0.55
CDPF1-206ENST00000475605 CENPBP07199 599 aaPredicted RBP18.47■□□□□ 0.55
CDPF1-206ENST00000475605 IQCF3P0C7M6 154 aa18.47■□□□□ 0.55
CDPF1-206ENST00000475605 TXNP10599 105 aaKnown RBP18.47■□□□□ 0.55
CDPF1-206ENST00000475605 CHMP4BP1P59074 171 aa18.47■□□□□ 0.55
CDPF1-206ENST00000475605 KRT40Q6A162 431 aa18.47■□□□□ 0.55
CDPF1-206ENST00000475605 TBC1D10CQ8IV04 446 aa18.47■□□□□ 0.55
CDPF1-206ENST00000475605 SCFD2Q8WU76 684 aa18.47■□□□□ 0.55
CDPF1-206ENST00000475605 TBC1D5Q92609 795 aa18.47■□□□□ 0.55
CDPF1-206ENST00000475605 ZKSCAN3Q9BRR0 538 aa18.47■□□□□ 0.55
CDPF1-206ENST00000475605 UBA5Q9GZZ9 404 aa18.47■□□□□ 0.55
CDPF1-206ENST00000475605 WDR19Q8NEZ3 1342 aa18.47■□□□□ 0.55
CDPF1-206ENST00000475605 BRDTQ58F21 947 aaPredicted RBP18.46■□□□□ 0.55
CDPF1-206ENST00000475605 NFRKBQ6P4R8 1299 aa18.46■□□□□ 0.55
CDPF1-206ENST00000475605 RETREG2Q8NC44 543 aa18.46■□□□□ 0.55
CDPF1-206ENST00000475605 IL27Q8NEV9 243 aa18.46■□□□□ 0.55
CDPF1-206ENST00000475605 DNERQ8NFT8 737 aa18.46■□□□□ 0.55
CDPF1-206ENST00000475605 TTC14Q96N46 770 aa18.46■□□□□ 0.55
CDPF1-206ENST00000475605 FTOQ9C0B1 505 aaKnown RBP eCLIP18.46■□□□□ 0.55
CDPF1-206ENST00000475605 MTCH2Q9Y6C9 303 aa18.46■□□□□ 0.55
CDPF1-206ENST00000475605 TET1Q8NFU7 2136 aa18.46■□□□□ 0.55
CDPF1-206ENST00000475605 PRRC2BQ5JSZ5 2229 aaKnown RBP18.45■□□□□ 0.54
CDPF1-206ENST00000475605 KPNA6O60684 536 aa18.45■□□□□ 0.54
CDPF1-206ENST00000475605 ACTN1P12814 892 aa18.45■□□□□ 0.54
CDPF1-206ENST00000475605 BMP1P13497 986 aa18.45■□□□□ 0.54
CDPF1-206ENST00000475605 RFC2P35250 354 aa18.45■□□□□ 0.54
CDPF1-206ENST00000475605 KCNQ1P51787 676 aa18.45■□□□□ 0.54
CDPF1-206ENST00000475605 SKIV2LQ15477 1246 aaKnown RBP18.45■□□□□ 0.54
CDPF1-206ENST00000475605 MFSD6Q6ZSS7 791 aa18.45■□□□□ 0.54
CDPF1-206ENST00000475605 SPRED2Q7Z698 418 aa18.45■□□□□ 0.54
CDPF1-206ENST00000475605 MPHOSPH6Q99547 160 aaKnown RBP18.45■□□□□ 0.54
CDPF1-206ENST00000475605 TSPYL2Q9H2G4 693 aaPredicted RBP18.45■□□□□ 0.54
CDPF1-206ENST00000475605 ZMYM6O95789 1325 aa18.45■□□□□ 0.54
CDPF1-206ENST00000475605 NEDD4P46934 1319 aa18.45■□□□□ 0.54
CDPF1-206ENST00000475605 RAD50Q92878 1312 aa18.45■□□□□ 0.54
CDPF1-206ENST00000475605 TANC1Q9C0D5 1861 aa18.44■□□□□ 0.54
CDPF1-206ENST00000475605 PITPNM1O00562 1244 aa18.44■□□□□ 0.54
CDPF1-206ENST00000475605 TAP1Q03518 808 aa18.44■□□□□ 0.54
CDPF1-206ENST00000475605 PTPN11Q06124 597 aaPredicted RBP18.44■□□□□ 0.54
CDPF1-206ENST00000475605 CCDC62Q6P9F0 684 aa18.44■□□□□ 0.54
CDPF1-206ENST00000475605 HERC6Q8IVU3 1022 aa18.44■□□□□ 0.54
CDPF1-206ENST00000475605 AFG1LQ8WV93 481 aa18.44■□□□□ 0.54
CDPF1-206ENST00000475605 ARNTL2Q8WYA1 636 aa18.44■□□□□ 0.54
CDPF1-206ENST00000475605 TAAR1Q96RJ0 339 aa18.44■□□□□ 0.54
CDPF1-206ENST00000475605 CTAGE1Q96RT6 745 aa18.44■□□□□ 0.54
CDPF1-206ENST00000475605 SLC9A7Q96T83 725 aa18.44■□□□□ 0.54
CDPF1-206ENST00000475605 PNMA2Q9UL42 364 aa18.44■□□□□ 0.54
CDPF1-206ENST00000475605 NOD1Q9Y239 953 aa18.44■□□□□ 0.54
CDPF1-206ENST00000475605 CCDC171Q6TFL3 1326 aa18.44■□□□□ 0.54
CDPF1-206ENST00000475605 TRIP12Q14669 1992 aaPredicted RBP18.43■□□□□ 0.54
CDPF1-206ENST00000475605 POU3F3P20264 500 aaPredicted RBP18.43■□□□□ 0.54
CDPF1-206ENST00000475605 PTGISQ16647 500 aa18.43■□□□□ 0.54
CDPF1-206ENST00000475605 LY6KQ17RY6 165 aa18.43■□□□□ 0.54
CDPF1-206ENST00000475605 B4GALNT3Q6L9W6 998 aa18.43■□□□□ 0.54
CDPF1-206ENST00000475605 SEPT14Q6ZU15 432 aa18.43■□□□□ 0.54
CDPF1-206ENST00000475605 PHOSPHO2Q8TCD6 241 aa18.43■□□□□ 0.54
CDPF1-206ENST00000475605 COL20A1Q9P218 1284 aa18.43■□□□□ 0.54
CDPF1-206ENST00000475605 TRIM6-TRIM34B2RNG4 842 aa18.42■□□□□ 0.54
CDPF1-206ENST00000475605 IGHDP01880 384 aa18.42■□□□□ 0.54
CDPF1-206ENST00000475605 NEFLP07196 543 aa18.42■□□□□ 0.54
CDPF1-206ENST00000475605 BFSP2Q13515 415 aa18.42■□□□□ 0.54
CDPF1-206ENST00000475605 GPNMBQ14956 572 aa18.42■□□□□ 0.54
CDPF1-206ENST00000475605 CDC37Q16543 378 aaPredicted RBP18.42■□□□□ 0.54
CDPF1-206ENST00000475605 GDF6Q6KF10 455 aaPredicted RBP18.42■□□□□ 0.54
CDPF1-206ENST00000475605 CHST3Q7LGC8 479 aa18.42■□□□□ 0.54
CDPF1-206ENST00000475605 TMCO2Q7Z6W1 182 aaPredicted RBP18.42■□□□□ 0.54
CDPF1-206ENST00000475605 SMC5Q8IY18 1101 aa18.42■□□□□ 0.54
CDPF1-206ENST00000475605 RGS22Q8NE09 1264 aa18.42■□□□□ 0.54
CDPF1-206ENST00000475605 SYTL5Q8TDW5 730 aaPredicted RBP18.42■□□□□ 0.54
CDPF1-206ENST00000475605 KAT2BQ92831 832 aa18.42■□□□□ 0.54
CDPF1-206ENST00000475605 RILPL2Q969X0 211 aa18.42■□□□□ 0.54
CDPF1-206ENST00000475605 PTPRSQ13332 1948 aa18.42■□□□□ 0.54
CDPF1-206ENST00000475605 B4DLN1 442 aa18.41■□□□□ 0.54
CDPF1-206ENST00000475605 GTPBP6O43824 516 aaPredicted RBP18.41■□□□□ 0.54
CDPF1-206ENST00000475605 MMP3P08254 477 aa18.41■□□□□ 0.54
CDPF1-206ENST00000475605 MRPL12P52815 198 aaKnown RBP18.41■□□□□ 0.54
CDPF1-206ENST00000475605 ARHGAP1Q07960 439 aa18.41■□□□□ 0.54
CDPF1-206ENST00000475605 GPATCH4Q5T3I0 446 aaKnown RBP18.41■□□□□ 0.54
CDPF1-206ENST00000475605 ESR2Q92731 530 aa18.41■□□□□ 0.54
CDPF1-206ENST00000475605 LNPKQ9C0E8 428 aa18.41■□□□□ 0.54
CDPF1-206ENST00000475605 REV3LO60673 3130 aa18.41■□□□□ 0.54
CDPF1-206ENST00000475605 NCOR1O75376 2440 aa18.4■□□□□ 0.54
CDPF1-206ENST00000475605 GH1P01241 217 aa18.4■□□□□ 0.54
CDPF1-206ENST00000475605 PCP11498 1178 aaKnown RBP18.4■□□□□ 0.54
CDPF1-206ENST00000475605 GRB10Q13322 594 aa18.4■□□□□ 0.54
CDPF1-206ENST00000475605 TCTN1Q2MV58 587 aa18.4■□□□□ 0.54
CDPF1-206ENST00000475605 DGKHQ86XP1 1220 aa18.4■□□□□ 0.54
CDPF1-206ENST00000475605 ADGRF4Q8IZF3 695 aa18.4■□□□□ 0.54
CDPF1-206ENST00000475605 PNMA1Q8ND90 353 aa18.4■□□□□ 0.54
CDPF1-206ENST00000475605 DHX38Q92620 1227 aaKnown RBP18.4■□□□□ 0.54
CDPF1-206ENST00000475605 RNF41Q9H4P4 317 aaPredicted RBP18.4■□□□□ 0.54
CDPF1-206ENST00000475605 LCHNA4D1U4 455 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms