RNA–Protein interactions for RNA: ENST00000474896.1

SRRT-209, Transcript of serrate, RNA effector molecule, humanhuman

TSL 3

Gene SRRT, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-209ENST00000474896 RETREG2Q8NC44 543 aa18.33■□□□□ 0.52
SRRT-209ENST00000474896 ADAMTS19Q8TE59 1207 aa18.33■□□□□ 0.52
SRRT-209ENST00000474896 UBA5Q9GZZ9 404 aa18.33■□□□□ 0.52
SRRT-209ENST00000474896 TSPYL2Q9H2G4 693 aaPredicted RBP18.33■□□□□ 0.52
SRRT-209ENST00000474896 SCN5AQ14524 2016 aa18.33■□□□□ 0.52
SRRT-209ENST00000474896 CHD9Q3L8U1 2897 aa18.32■□□□□ 0.52
SRRT-209ENST00000474896 ZMYM6O95789 1325 aa18.32■□□□□ 0.52
SRRT-209ENST00000474896 WDR19Q8NEZ3 1342 aa18.32■□□□□ 0.52
SRRT-209ENST00000474896 B4DLN1 442 aa18.32■□□□□ 0.52
SRRT-209ENST00000474896 RFXAPO00287 272 aa18.32■□□□□ 0.52
SRRT-209ENST00000474896 IQCF3P0C7M6 154 aa18.32■□□□□ 0.52
SRRT-209ENST00000474896 GOLGA8HP0CJ92 632 aa18.32■□□□□ 0.52
SRRT-209ENST00000474896 ACTN1P12814 892 aa18.32■□□□□ 0.52
SRRT-209ENST00000474896 MRPL12P52815 198 aaKnown RBP18.32■□□□□ 0.52
SRRT-209ENST00000474896 CHMP4BP1P59074 171 aa18.32■□□□□ 0.52
SRRT-209ENST00000474896 USH1GQ495M9 461 aa18.32■□□□□ 0.52
SRRT-209ENST00000474896 IL27Q8NEV9 243 aa18.32■□□□□ 0.52
SRRT-209ENST00000474896 RILPL2Q969X0 211 aa18.32■□□□□ 0.52
SRRT-209ENST00000474896 ZKSCAN3Q9BRR0 538 aa18.32■□□□□ 0.52
SRRT-209ENST00000474896 FTOQ9C0B1 505 aaKnown RBP eCLIP18.32■□□□□ 0.52
SRRT-209ENST00000474896 CPVLQ9H3G5 476 aa18.32■□□□□ 0.52
SRRT-209ENST00000474896 CCDC171Q6TFL3 1326 aa18.31■□□□□ 0.52
SRRT-209ENST00000474896 ARIH2O95376 493 aa18.31■□□□□ 0.52
SRRT-209ENST00000474896 CA3P07451 260 aa18.31■□□□□ 0.52
SRRT-209ENST00000474896 PCP11498 1178 aaKnown RBP18.31■□□□□ 0.52
SRRT-209ENST00000474896 RFC2P35250 354 aa18.31■□□□□ 0.52
SRRT-209ENST00000474896 PTPN11Q06124 597 aaPredicted RBP18.31■□□□□ 0.52
SRRT-209ENST00000474896 HDAC1Q13547 482 aaPredicted RBP18.31■□□□□ 0.52
SRRT-209ENST00000474896 TBC1D10CQ8IV04 446 aa18.31■□□□□ 0.52
SRRT-209ENST00000474896 RGS22Q8NE09 1264 aa18.31■□□□□ 0.52
SRRT-209ENST00000474896 TBC1D5Q92609 795 aa18.31■□□□□ 0.52
SRRT-209ENST00000474896 ESR2Q92731 530 aa18.31■□□□□ 0.52
SRRT-209ENST00000474896 UHRF1Q96T88 793 aaPredicted RBP18.31■□□□□ 0.52
SRRT-209ENST00000474896 RNF41Q9H4P4 317 aaPredicted RBP18.31■□□□□ 0.52
SRRT-209ENST00000474896 CERS4Q9HA82 394 aa18.31■□□□□ 0.52
SRRT-209ENST00000474896 SCN10AQ9Y5Y9 1956 aa18.31■□□□□ 0.52
SRRT-209ENST00000474896 PITPNM1O00562 1244 aa18.3■□□□□ 0.52
SRRT-209ENST00000474896 GPATCH4Q5T3I0 446 aaKnown RBP18.3■□□□□ 0.52
SRRT-209ENST00000474896 DGKHQ86XP1 1220 aa18.3■□□□□ 0.52
SRRT-209ENST00000474896 NOD1Q9Y239 953 aa18.3■□□□□ 0.52
SRRT-209ENST00000474896 ZNF213O14771 459 aa18.29■□□□□ 0.52
SRRT-209ENST00000474896 COL9A1P20849 921 aa18.29■□□□□ 0.52
SRRT-209ENST00000474896 BFSP2Q13515 415 aa18.29■□□□□ 0.52
SRRT-209ENST00000474896 LY6KQ17RY6 165 aa18.29■□□□□ 0.52
SRRT-209ENST00000474896 CCDC62Q6P9F0 684 aa18.29■□□□□ 0.52
SRRT-209ENST00000474896 SEPT14Q6ZU15 432 aa18.29■□□□□ 0.52
SRRT-209ENST00000474896 PHOSPHO2Q8TCD6 241 aa18.29■□□□□ 0.52
SRRT-209ENST00000474896 AFG1LQ8WV93 481 aa18.29■□□□□ 0.52
SRRT-209ENST00000474896 TAAR1Q96RJ0 339 aa18.29■□□□□ 0.52
SRRT-209ENST00000474896 SLC9A7Q96T83 725 aa18.29■□□□□ 0.52
SRRT-209ENST00000474896 LNPKQ9C0E8 428 aa18.29■□□□□ 0.52
SRRT-209ENST00000474896 NEDD4P46934 1319 aa18.28■□□□□ 0.52
SRRT-209ENST00000474896 TRIP12Q14669 1992 aaPredicted RBP18.28■□□□□ 0.52
SRRT-209ENST00000474896 TCF20Q9UGU0 1960 aaKnown RBP18.28■□□□□ 0.52
SRRT-209ENST00000474896 KIF28PB7ZC32 967 aa18.28■□□□□ 0.52
SRRT-209ENST00000474896 SDSP20132 328 aa18.28■□□□□ 0.52
SRRT-209ENST00000474896 MFAP1P55081 439 aaKnown RBP18.28■□□□□ 0.52
SRRT-209ENST00000474896 TFF2Q03403 129 aa18.28■□□□□ 0.52
SRRT-209ENST00000474896 SKIV2LQ15477 1246 aaKnown RBP18.28■□□□□ 0.52
SRRT-209ENST00000474896 PTGISQ16647 500 aa18.28■□□□□ 0.52
SRRT-209ENST00000474896 MTCH2Q9Y6C9 303 aa18.28■□□□□ 0.52
SRRT-209ENST00000474896 GTPBP6O43824 516 aaPredicted RBP18.27■□□□□ 0.52
SRRT-209ENST00000474896 BMP1P13497 986 aa18.27■□□□□ 0.52
SRRT-209ENST00000474896 POU3F3P20264 500 aaPredicted RBP18.27■□□□□ 0.52
SRRT-209ENST00000474896 CDC37Q16543 378 aaPredicted RBP18.27■□□□□ 0.52
SRRT-209ENST00000474896 CCDC178Q5BJE1 867 aa18.27■□□□□ 0.52
SRRT-209ENST00000474896 CHST3Q7LGC8 479 aa18.27■□□□□ 0.52
SRRT-209ENST00000474896 HERC6Q8IVU3 1022 aa18.27■□□□□ 0.52
SRRT-209ENST00000474896 ADGRF4Q8IZF3 695 aa18.27■□□□□ 0.52
SRRT-209ENST00000474896 PNMA1Q8ND90 353 aa18.27■□□□□ 0.52
SRRT-209ENST00000474896 TET1Q8NFU7 2136 aa18.27■□□□□ 0.52
SRRT-209ENST00000474896 SYTL5Q8TDW5 730 aaPredicted RBP18.27■□□□□ 0.52
SRRT-209ENST00000474896 NSUN6Q8TEA1 469 aaKnown RBP18.27■□□□□ 0.52
SRRT-209ENST00000474896 KAT14Q9H8E8 782 aa18.27■□□□□ 0.52
SRRT-209ENST00000474896 PRRC2BQ5JSZ5 2229 aaKnown RBP18.27■□□□□ 0.52
SRRT-209ENST00000474896 MUC3AQ02505 3323 aa18.27■□□□□ 0.51
SRRT-209ENST00000474896 NCOR1O75376 2440 aa18.27■□□□□ 0.51
SRRT-209ENST00000474896 ABCB11O95342 1321 aa18.26■□□□□ 0.51
SRRT-209ENST00000474896 EPOPA6NHQ4 379 aa18.26■□□□□ 0.51
SRRT-209ENST00000474896 KDM4AO75164 1064 aa18.26■□□□□ 0.51
SRRT-209ENST00000474896 GH1P01241 217 aa18.26■□□□□ 0.51
SRRT-209ENST00000474896 MMP3P08254 477 aa18.26■□□□□ 0.51
SRRT-209ENST00000474896 TAP1Q03518 808 aa18.26■□□□□ 0.51
SRRT-209ENST00000474896 STXBP2Q15833 593 aa18.26■□□□□ 0.51
SRRT-209ENST00000474896 KRT40Q6A162 431 aa18.26■□□□□ 0.51
SRRT-209ENST00000474896 GDF6Q6KF10 455 aaPredicted RBP18.26■□□□□ 0.51
SRRT-209ENST00000474896 B4GALNT3Q6L9W6 998 aa18.26■□□□□ 0.51
SRRT-209ENST00000474896 IQCA1Q86XH1 822 aa18.26■□□□□ 0.51
SRRT-209ENST00000474896 ARNTL2Q8WYA1 636 aa18.26■□□□□ 0.51
SRRT-209ENST00000474896 ANKS1AQ92625 1134 aa18.26■□□□□ 0.51
SRRT-209ENST00000474896 NECAB3Q96P71 396 aaPredicted RBP18.26■□□□□ 0.51
SRRT-209ENST00000474896 MAF1Q9H063 256 aa18.26■□□□□ 0.51
SRRT-209ENST00000474896 VAT1LQ9HCJ6 419 aa18.26■□□□□ 0.51
SRRT-209ENST00000474896 COL20A1Q9P218 1284 aa18.26■□□□□ 0.51
SRRT-209ENST00000474896 CHD7Q9P2D1 2997 aa18.26■□□□□ 0.51
SRRT-209ENST00000474896 ARHGEF15O94989 841 aa18.25■□□□□ 0.51
SRRT-209ENST00000474896 CASTP20810 708 aaKnown RBP18.25■□□□□ 0.51
SRRT-209ENST00000474896 ARHGAP1Q07960 439 aa18.25■□□□□ 0.51
SRRT-209ENST00000474896 AAK1Q2M2I8 961 aa18.25■□□□□ 0.51
SRRT-209ENST00000474896 MCF2L2Q86YR7 1114 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms