RNA–Protein interactions for RNA: ENST00000474305.2

CASP9-209, Transcript of caspase 9, humanhuman

TSL 1 (best)

Gene CASP9, Length 1,111 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP9-209ENST00000474305 RNF208Q9H0X6 261 aa21.28■■□□□ 1
CASP9-209ENST00000474305 ABHD16BQ9H3Z7 469 aa21.28■■□□□ 1
CASP9-209ENST00000474305 ZNF865P0CJ78 1059 aaPredicted RBP21.27■■□□□ 1
CASP9-209ENST00000474305 FDPSP14324 419 aaKnown RBP21.27■■□□□ 1
CASP9-209ENST00000474305 CCND3P30281 292 aaPredicted RBP21.27■■□□□ 1
CASP9-209ENST00000474305 USP17L6PQ6QN14 398 aa21.27■■□□□ 1
CASP9-209ENST00000474305 LLPHQ9BRT6 129 aaKnown RBP21.27■■□□□ 1
CASP9-209ENST00000474305 TMEM106CQ9BVX2 250 aa21.27■■□□□ 1
CASP9-209ENST00000474305 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.27■■□□□ 1
CASP9-209ENST00000474305 PXMP2Q9NR77 195 aa21.27■■□□□ 1
CASP9-209ENST00000474305 CNPY2Q9Y2B0 182 aa21.27■■□□□ 1
CASP9-209ENST00000474305 GJB1P08034 283 aa21.26■□□□□ 0.99
CASP9-209ENST00000474305 CAPN2P17655 700 aa21.26■□□□□ 0.99
CASP9-209ENST00000474305 ACVR2BQ13705 512 aa21.26■□□□□ 0.99
CASP9-209ENST00000474305 SMARCC2Q8TAQ2 1214 aa21.26■□□□□ 0.99
CASP9-209ENST00000474305 ORC3Q9UBD5 711 aaPredicted RBP21.26■□□□□ 0.99
CASP9-209ENST00000474305 MYCP01106 439 aaPredicted RBP21.25■□□□□ 0.99
CASP9-209ENST00000474305 ADCY7P51828 1080 aa21.25■□□□□ 0.99
CASP9-209ENST00000474305 ARHGEF16Q5VV41 709 aa21.25■□□□□ 0.99
CASP9-209ENST00000474305 FCHSD1Q86WN1 690 aa21.25■□□□□ 0.99
CASP9-209ENST00000474305 CCDC83Q8IWF9 413 aa21.25■□□□□ 0.99
CASP9-209ENST00000474305 CCDC148Q8NFR7 591 aa21.25■□□□□ 0.99
CASP9-209ENST00000474305 SHISA4Q96DD7 197 aa21.25■□□□□ 0.99
CASP9-209ENST00000474305 TMX3Q96JJ7 454 aa21.25■□□□□ 0.99
CASP9-209ENST00000474305 FRMPD4Q14CM0 1322 aa21.25■□□□□ 0.99
CASP9-209ENST00000474305 CCDC85CA6NKD9 419 aa21.24■□□□□ 0.99
CASP9-209ENST00000474305 SEPT4O43236 478 aa21.24■□□□□ 0.99
CASP9-209ENST00000474305 NR3C2P08235 984 aa21.24■□□□□ 0.99
CASP9-209ENST00000474305 GNA11P29992 359 aa21.24■□□□□ 0.99
CASP9-209ENST00000474305 CLK2P49760 499 aaKnown RBP21.24■□□□□ 0.99
CASP9-209ENST00000474305 VSIG10LQ86VR7 867 aa21.24■□□□□ 0.99
CASP9-209ENST00000474305 WASF1Q92558 559 aa21.24■□□□□ 0.99
CASP9-209ENST00000474305 PDCD2LQ9BRP1 358 aa21.24■□□□□ 0.99
CASP9-209ENST00000474305 C6orf50Q9HD87 102 aa21.24■□□□□ 0.99
CASP9-209ENST00000474305 VTA1Q9NP79 307 aa21.24■□□□□ 0.99
CASP9-209ENST00000474305 VPS54Q9P1Q0 977 aa21.24■□□□□ 0.99
CASP9-209ENST00000474305 DDX49Q9Y6V7 483 aaKnown RBP21.24■□□□□ 0.99
CASP9-209ENST00000474305 MSCO60682 206 aa21.23■□□□□ 0.99
CASP9-209ENST00000474305 SGPL1O95470 568 aa21.23■□□□□ 0.99
CASP9-209ENST00000474305 FOSP01100 380 aaPredicted RBP21.23■□□□□ 0.99
CASP9-209ENST00000474305 PDE4DQ08499 809 aa21.23■□□□□ 0.99
CASP9-209ENST00000474305 LHX8Q68G74 356 aa21.23■□□□□ 0.99
CASP9-209ENST00000474305 TAPT1Q6NXT6 567 aa21.23■□□□□ 0.99
CASP9-209ENST00000474305 AIFM3Q96NN9 605 aa21.23■□□□□ 0.99
CASP9-209ENST00000474305 DDX20Q9UHI6 824 aaKnown RBP21.23■□□□□ 0.99
CASP9-209ENST00000474305 RBM47A0AV96 593 aaKnown RBP21.22■□□□□ 0.99
CASP9-209ENST00000474305 JAK2O60674 1132 aa21.22■□□□□ 0.99
CASP9-209ENST00000474305 EIF3JO75822 258 aaKnown RBP21.22■□□□□ 0.99
CASP9-209ENST00000474305 EIF2AK2P19525 551 aaKnown RBP21.22■□□□□ 0.99
CASP9-209ENST00000474305 CNGA1P29973 690 aa21.22■□□□□ 0.99
CASP9-209ENST00000474305 GJA8P48165 433 aa21.22■□□□□ 0.99
CASP9-209ENST00000474305 PGM5Q15124 567 aa21.22■□□□□ 0.99
CASP9-209ENST00000474305 STXBP2Q15833 593 aa21.22■□□□□ 0.99
CASP9-209ENST00000474305 UBE2SQ16763 222 aa21.22■□□□□ 0.99
CASP9-209ENST00000474305 MCTP2Q6DN12 878 aa21.22■□□□□ 0.99
CASP9-209ENST00000474305 DEFB118Q96PH6 123 aa21.22■□□□□ 0.99
CASP9-209ENST00000474305 CRISPLD2Q9H0B8 497 aa21.22■□□□□ 0.99
CASP9-209ENST00000474305 FAM184BQ9ULE4 1060 aa21.22■□□□□ 0.99
CASP9-209ENST00000474305 PCDHA6Q9UN73 950 aa21.22■□□□□ 0.99
CASP9-209ENST00000474305 PCDHA8Q9Y5H6 950 aa21.22■□□□□ 0.99
CASP9-209ENST00000474305 BRCA2P51587 3418 aa21.22■□□□□ 0.99
CASP9-209ENST00000474305 KIAA1217Q5T5P2 1943 aa21.21■□□□□ 0.99
CASP9-209ENST00000474305 DTNBO60941 627 aa21.21■□□□□ 0.99
CASP9-209ENST00000474305 AKR1A1P14550 325 aa21.21■□□□□ 0.99
CASP9-209ENST00000474305 CCDC144BQ3MJ40 725 aa21.21■□□□□ 0.99
CASP9-209ENST00000474305 IQSEC1Q6DN90 963 aa21.21■□□□□ 0.99
CASP9-209ENST00000474305 GALNT17Q6IS24 598 aa21.21■□□□□ 0.99
CASP9-209ENST00000474305 XRRA1Q6P2D8 792 aa21.21■□□□□ 0.99
CASP9-209ENST00000474305 BICD2Q8TD16 824 aa21.21■□□□□ 0.99
CASP9-209ENST00000474305 U2AF1L4Q8WU68 220 aaKnown RBP21.21■□□□□ 0.99
CASP9-209ENST00000474305 ZHX1Q9UKY1 873 aaPredicted RBP21.21■□□□□ 0.99
CASP9-209ENST00000474305 LRRC37A2A6NM11 1700 aa21.21■□□□□ 0.99
CASP9-209ENST00000474305 POTEFA5A3E0 1075 aa21.2■□□□□ 0.98
CASP9-209ENST00000474305 SPDYE3A6NKU9 549 aa21.2■□□□□ 0.98
CASP9-209ENST00000474305 XBP1P17861 261 aa21.2■□□□□ 0.98
CASP9-209ENST00000474305 NLRP5P59047 1200 aa21.2■□□□□ 0.98
CASP9-209ENST00000474305 HMGN5P82970 282 aaKnown RBP21.2■□□□□ 0.98
CASP9-209ENST00000474305 AP3B2Q13367 1082 aa21.2■□□□□ 0.98
CASP9-209ENST00000474305 EEPD1Q7L9B9 569 aa21.2■□□□□ 0.98
CASP9-209ENST00000474305 SNX21Q969T3 373 aa21.2■□□□□ 0.98
CASP9-209ENST00000474305 ALG1Q9BT22 464 aa21.2■□□□□ 0.98
CASP9-209ENST00000474305 OGDHLQ9ULD0 1010 aa21.2■□□□□ 0.98
CASP9-209ENST00000474305 PCDHA4Q9UN74 947 aa21.2■□□□□ 0.98
CASP9-209ENST00000474305 ADAMTS3O15072 1205 aa21.19■□□□□ 0.98
CASP9-209ENST00000474305 STAM2O75886 525 aa21.19■□□□□ 0.98
CASP9-209ENST00000474305 CCND2P30279 289 aa21.19■□□□□ 0.98
CASP9-209ENST00000474305 NPY5RQ15761 445 aa21.19■□□□□ 0.98
CASP9-209ENST00000474305 FBXO16Q8IX29 292 aaPredicted RBP21.19■□□□□ 0.98
CASP9-209ENST00000474305 DAGLBQ8NCG7 672 aa21.19■□□□□ 0.98
CASP9-209ENST00000474305 IL31RAQ8NI17 732 aa21.19■□□□□ 0.98
CASP9-209ENST00000474305 PHF20Q9BVI0 1012 aa21.19■□□□□ 0.98
CASP9-209ENST00000474305 PDGFCQ9NRA1 345 aa21.19■□□□□ 0.98
CASP9-209ENST00000474305 M0R2N6 131 aa21.18■□□□□ 0.98
CASP9-209ENST00000474305 MYCLP12524 364 aaPredicted RBP21.18■□□□□ 0.98
CASP9-209ENST00000474305 MRPS9P82933 396 aaKnown RBP21.18■□□□□ 0.98
CASP9-209ENST00000474305 PCNX4Q63HM2 1172 aa21.18■□□□□ 0.98
CASP9-209ENST00000474305 REXO1Q8N1G1 1221 aaKnown RBP21.18■□□□□ 0.98
CASP9-209ENST00000474305 EHMT1Q9H9B1 1298 aa21.18■□□□□ 0.98
CASP9-209ENST00000474305 TMEM260Q9NX78 707 aa21.18■□□□□ 0.98
CASP9-209ENST00000474305 DUSP11O75319 330 aaKnown RBP21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms