RNA–Protein interactions for RNA: ENST00000474258.1

SEMA4D-216, Transcript of semaphorin 4D, humanhuman

TSL 4

Gene SEMA4D, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-216ENST00000474258 KPNA6O60684 536 aa12.91□□□□□ -0.34
SEMA4D-216ENST00000474258 FGBP02675 491 aa12.91□□□□□ -0.34
SEMA4D-216ENST00000474258 SUPT20HL2P0C7V6 817 aa12.91□□□□□ -0.34
SEMA4D-216ENST00000474258 TXNP10599 105 aaKnown RBP12.91□□□□□ -0.34
SEMA4D-216ENST00000474258 FOSL2P15408 326 aa12.91□□□□□ -0.34
SEMA4D-216ENST00000474258 PDE4AP27815 886 aa12.91□□□□□ -0.34
SEMA4D-216ENST00000474258 TTLL4Q14679 1199 aa12.91□□□□□ -0.34
SEMA4D-216ENST00000474258 QRICH1Q2TAL8 776 aa12.91□□□□□ -0.34
SEMA4D-216ENST00000474258 IFIT1BQ5T764 474 aaKnown RBP12.91□□□□□ -0.34
SEMA4D-216ENST00000474258 TTC22Q5TAA0 569 aa12.91□□□□□ -0.34
SEMA4D-216ENST00000474258 FBXO11Q86XK2 927 aa12.91□□□□□ -0.34
SEMA4D-216ENST00000474258 RPUSD2Q8IZ73 545 aaKnown RBP12.91□□□□□ -0.34
SEMA4D-216ENST00000474258 MAFAQ8NHW3 353 aaPredicted RBP12.91□□□□□ -0.34
SEMA4D-216ENST00000474258 NSUN6Q8TEA1 469 aaKnown RBP12.91□□□□□ -0.34
SEMA4D-216ENST00000474258 RUFY2Q8WXA3 655 aa12.91□□□□□ -0.34
SEMA4D-216ENST00000474258 HERVK_113Q902F9 699 aa12.91□□□□□ -0.34
SEMA4D-216ENST00000474258 TBC1D5Q92609 795 aa12.91□□□□□ -0.34
SEMA4D-216ENST00000474258 TIFAQ96CG3 184 aa12.91□□□□□ -0.34
SEMA4D-216ENST00000474258 MTG1Q9BT17 334 aaPredicted RBP12.91□□□□□ -0.34
SEMA4D-216ENST00000474258 NOC4LQ9BVI4 516 aaKnown RBP12.91□□□□□ -0.34
SEMA4D-216ENST00000474258 ZNF576Q9H609 170 aa12.91□□□□□ -0.34
SEMA4D-216ENST00000474258 VAT1LQ9HCJ6 419 aa12.91□□□□□ -0.34
SEMA4D-216ENST00000474258 MRPL11Q9Y3B7 192 aaKnown RBP12.91□□□□□ -0.34
SEMA4D-216ENST00000474258 UMODL1Q5DID0 1318 aa12.9□□□□□ -0.34
SEMA4D-216ENST00000474258 A6NJR5 290 aa12.9□□□□□ -0.34
SEMA4D-216ENST00000474258 CCL23P55773 120 aa12.9□□□□□ -0.34
SEMA4D-216ENST00000474258 TRDNQ13061 729 aa12.9□□□□□ -0.34
SEMA4D-216ENST00000474258 SYTL5Q8TDW5 730 aaPredicted RBP12.9□□□□□ -0.34
SEMA4D-216ENST00000474258 COPS5Q92905 334 aa12.9□□□□□ -0.34
SEMA4D-216ENST00000474258 TAAR1Q96RJ0 339 aa12.9□□□□□ -0.34
SEMA4D-216ENST00000474258 IWS1Q96ST2 819 aa12.9□□□□□ -0.34
SEMA4D-216ENST00000474258 PBX4Q9BYU1 374 aa12.9□□□□□ -0.34
SEMA4D-216ENST00000474258 IL25Q9H293 177 aa12.9□□□□□ -0.34
SEMA4D-216ENST00000474258 JMJD4Q9H9V9 463 aa12.9□□□□□ -0.34
SEMA4D-216ENST00000474258 GRXCR1A8MXD5 290 aa12.89□□□□□ -0.35
SEMA4D-216ENST00000474258 GSPT1P15170 499 aaKnown RBP12.89□□□□□ -0.35
SEMA4D-216ENST00000474258 GRIN2CQ14957 1233 aa12.89□□□□□ -0.35
SEMA4D-216ENST00000474258 SEC23AQ15436 765 aa12.89□□□□□ -0.35
SEMA4D-216ENST00000474258 STXBP2Q15833 593 aa12.89□□□□□ -0.35
SEMA4D-216ENST00000474258 NBPF20Q3BBV1 942 aa12.89□□□□□ -0.35
SEMA4D-216ENST00000474258 NFRKBQ6P4R8 1299 aa12.89□□□□□ -0.35
SEMA4D-216ENST00000474258 WNT8AQ9H1J5 351 aa12.89□□□□□ -0.35
SEMA4D-216ENST00000474258 TRMT13Q9NUP7 481 aaKnown RBP12.89□□□□□ -0.35
SEMA4D-216ENST00000474258 TET1Q8NFU7 2136 aa12.89□□□□□ -0.35
SEMA4D-216ENST00000474258 KLRF2D3W0D1 207 aa12.88□□□□□ -0.35
SEMA4D-216ENST00000474258 ARIH2O95376 493 aa12.88□□□□□ -0.35
SEMA4D-216ENST00000474258 PTPN11Q06124 597 aaPredicted RBP12.88□□□□□ -0.35
SEMA4D-216ENST00000474258 RAB30Q15771 203 aa12.88□□□□□ -0.35
SEMA4D-216ENST00000474258 FAM47CQ5HY64 1035 aa12.88□□□□□ -0.35
SEMA4D-216ENST00000474258 ARHGEF16Q5VV41 709 aa12.88□□□□□ -0.35
SEMA4D-216ENST00000474258 CCDC62Q6P9F0 684 aa12.88□□□□□ -0.35
SEMA4D-216ENST00000474258 SEPT14Q6ZU15 432 aa12.88□□□□□ -0.35
SEMA4D-216ENST00000474258 CYB5R4Q7L1T6 521 aa12.88□□□□□ -0.35
SEMA4D-216ENST00000474258 OTOP2Q7RTS6 562 aa12.88□□□□□ -0.35
SEMA4D-216ENST00000474258 STAG2Q8N3U4 1231 aa12.88□□□□□ -0.35
SEMA4D-216ENST00000474258 SCLYQ96I15 445 aa12.88□□□□□ -0.35
SEMA4D-216ENST00000474258 RMDN3Q96TC7 470 aa12.88□□□□□ -0.35
SEMA4D-216ENST00000474258 AMNQ9BXJ7 453 aa12.88□□□□□ -0.35
SEMA4D-216ENST00000474258 CXXC1Q9P0U4 656 aaPredicted RBP12.88□□□□□ -0.35
SEMA4D-216ENST00000474258 COL20A1Q9P218 1284 aa12.88□□□□□ -0.35
SEMA4D-216ENST00000474258 MSRAQ9UJ68 235 aa12.88□□□□□ -0.35
SEMA4D-216ENST00000474258 U3KPZ7 1027 aaPredicted RBP12.88□□□□□ -0.35
SEMA4D-216ENST00000474258 TANC1Q9C0D5 1861 aa12.88□□□□□ -0.35
SEMA4D-216ENST00000474258 KAT6AQ92794 2004 aa12.88□□□□□ -0.35
SEMA4D-216ENST00000474258 CDH23Q9H251 3354 aa12.87□□□□□ -0.35
SEMA4D-216ENST00000474258 ERICH2A1L162 156 aa12.87□□□□□ -0.35
SEMA4D-216ENST00000474258 PALM3A6NDB9 673 aaPredicted RBP12.87□□□□□ -0.35
SEMA4D-216ENST00000474258 CFBP00751 764 aa12.87□□□□□ -0.35
SEMA4D-216ENST00000474258 GH1P01241 217 aa12.87□□□□□ -0.35
SEMA4D-216ENST00000474258 PFKMP08237 780 aa12.87□□□□□ -0.35
SEMA4D-216ENST00000474258 CYP2C9P11712 490 aa12.87□□□□□ -0.35
SEMA4D-216ENST00000474258 CHMLP26374 656 aa12.87□□□□□ -0.35
SEMA4D-216ENST00000474258 PBX2P40425 430 aa12.87□□□□□ -0.35
SEMA4D-216ENST00000474258 LY6KQ17RY6 165 aa12.87□□□□□ -0.35
SEMA4D-216ENST00000474258 SAMD3Q8N6K7 520 aa12.87□□□□□ -0.35
SEMA4D-216ENST00000474258 MTMR8Q96EF0 704 aa12.87□□□□□ -0.35
SEMA4D-216ENST00000474258 MAP3K20Q9NYL2 800 aaKnown RBP12.87□□□□□ -0.35
SEMA4D-216ENST00000474258 MAD2L2Q9UI95 211 aa12.87□□□□□ -0.35
SEMA4D-216ENST00000474258 UNC80Q8N2C7 3258 aa12.86□□□□□ -0.35
SEMA4D-216ENST00000474258 A0A0C4DFX4 3053 aa12.86□□□□□ -0.35
SEMA4D-216ENST00000474258 IFIT3O14879 490 aaKnown RBP12.86□□□□□ -0.35
SEMA4D-216ENST00000474258 ZBTB5O15062 677 aa12.86□□□□□ -0.35
SEMA4D-216ENST00000474258 EIF3JO75822 258 aaKnown RBP12.86□□□□□ -0.35
SEMA4D-216ENST00000474258 NR3C2P08235 984 aa12.86□□□□□ -0.35
SEMA4D-216ENST00000474258 CYP21A2P08686 494 aa12.86□□□□□ -0.35
SEMA4D-216ENST00000474258 CASTP20810 708 aaKnown RBP12.86□□□□□ -0.35
SEMA4D-216ENST00000474258 HSD17B4P51659 736 aa12.86□□□□□ -0.35
SEMA4D-216ENST00000474258 PTH1RQ03431 593 aa12.86□□□□□ -0.35
SEMA4D-216ENST00000474258 TRAF1Q13077 416 aa12.86□□□□□ -0.35
SEMA4D-216ENST00000474258 RETREG2Q8NC44 543 aa12.86□□□□□ -0.35
SEMA4D-216ENST00000474258 NCOA7Q8NI08 942 aa12.86□□□□□ -0.35
SEMA4D-216ENST00000474258 AFG1LQ8WV93 481 aa12.86□□□□□ -0.35
SEMA4D-216ENST00000474258 GAS2L1Q99501 681 aaPredicted RBP12.86□□□□□ -0.35
SEMA4D-216ENST00000474258 COL25A1Q9BXS0 654 aaPredicted RBP12.86□□□□□ -0.35
SEMA4D-216ENST00000474258 PXMP2Q9NR77 195 aa12.86□□□□□ -0.35
SEMA4D-216ENST00000474258 SLC4A7Q9Y6M7 1214 aa12.86□□□□□ -0.35
SEMA4D-216ENST00000474258 EYSQ5T1H1 3165 aa12.86□□□□□ -0.35
SEMA4D-216ENST00000474258 ZBBXA8MT70 800 aa12.85□□□□□ -0.35
SEMA4D-216ENST00000474258 PITPNM1O00562 1244 aa12.85□□□□□ -0.35
SEMA4D-216ENST00000474258 MMP3P08254 477 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms