RNA–Protein interactions for RNA: ENST00000474136.5

APP-215, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 1,309 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-215ENST00000474136 PITPNM1O00562 1244 aa23.82■■□□□ 1.4
APP-215ENST00000474136 CTDSPL2Q05D32 466 aa23.82■■□□□ 1.4
APP-215ENST00000474136 SLC30A10Q6XR72 485 aa23.82■■□□□ 1.4
APP-215ENST00000474136 TMCO2Q7Z6W1 182 aaPredicted RBP23.82■■□□□ 1.4
APP-215ENST00000474136 GPATCH3Q96I76 525 aa23.82■■□□□ 1.4
APP-215ENST00000474136 RANBP17Q9H2T7 1088 aaKnown RBP23.82■■□□□ 1.4
APP-215ENST00000474136 PTPDC1A2A3K4 754 aa23.81■■□□□ 1.4
APP-215ENST00000474136 LCHNA4D1U4 455 aa23.81■■□□□ 1.4
APP-215ENST00000474136 NUCB1Q02818 461 aa23.81■■□□□ 1.4
APP-215ENST00000474136 NFRKBQ6P4R8 1299 aa23.81■■□□□ 1.4
APP-215ENST00000474136 ARIH1Q9Y4X5 557 aaPredicted RBP23.81■■□□□ 1.4
APP-215ENST00000474136 TET1Q8NFU7 2136 aa23.8■■□□□ 1.4
APP-215ENST00000474136 CALML3P27482 149 aa23.8■■□□□ 1.4
APP-215ENST00000474136 ANKRD45Q5TZF3 282 aa23.8■■□□□ 1.4
APP-215ENST00000474136 CD320Q9NPF0 282 aa23.8■■□□□ 1.4
APP-215ENST00000474136 SCN10AQ9Y5Y9 1956 aa23.79■■□□□ 1.4
APP-215ENST00000474136 FOXP2O15409 715 aa23.79■■□□□ 1.4
APP-215ENST00000474136 CHMP4BP1P59074 171 aa23.79■■□□□ 1.4
APP-215ENST00000474136 PPP2R5BQ15173 497 aa23.79■■□□□ 1.4
APP-215ENST00000474136 PPP4R3BQ5MIZ7 849 aa23.79■■□□□ 1.4
APP-215ENST00000474136 GDPD5Q8WTR4 605 aa23.79■■□□□ 1.4
APP-215ENST00000474136 CLEC4DQ8WXI8 215 aa23.79■■□□□ 1.4
APP-215ENST00000474136 FRMPD2Q68DX3 1309 aaPredicted RBP23.78■■□□□ 1.4
APP-215ENST00000474136 BFSP2Q13515 415 aa23.78■■□□□ 1.4
APP-215ENST00000474136 GPNMBQ14956 572 aa23.78■■□□□ 1.4
APP-215ENST00000474136 BRDTQ58F21 947 aaPredicted RBP23.78■■□□□ 1.4
APP-215ENST00000474136 ZMYM1Q5SVZ6 1142 aa23.78■■□□□ 1.4
APP-215ENST00000474136 SYDE2Q5VT97 1194 aa23.78■■□□□ 1.4
APP-215ENST00000474136 CHD1LQ86WJ1 897 aa23.78■■□□□ 1.4
APP-215ENST00000474136 DCAF4Q8WV16 495 aa23.78■■□□□ 1.4
APP-215ENST00000474136 NOD1Q9Y239 953 aa23.78■■□□□ 1.4
APP-215ENST00000474136 A6NJR5 290 aa23.77■■□□□ 1.4
APP-215ENST00000474136 RANBP6O60518 1105 aaKnown RBP23.77■■□□□ 1.4
APP-215ENST00000474136 GPR37L1O60883 481 aa23.77■■□□□ 1.4
APP-215ENST00000474136 BAIAP3O94812 1187 aa23.77■■□□□ 1.4
APP-215ENST00000474136 KCNJ6P48051 423 aa23.77■■□□□ 1.4
APP-215ENST00000474136 PDE4DQ08499 809 aa23.77■■□□□ 1.4
APP-215ENST00000474136 BTNL9Q6UXG8 535 aa23.77■■□□□ 1.4
APP-215ENST00000474136 GPCPD1Q9NPB8 672 aa23.77■■□□□ 1.4
APP-215ENST00000474136 BRWD1Q9NSI6 2320 aa23.76■■□□□ 1.39
APP-215ENST00000474136 RAD50Q92878 1312 aa23.76■■□□□ 1.39
APP-215ENST00000474136 LOC102724159A0A0B4J2E5 919 aa23.76■■□□□ 1.39
APP-215ENST00000474136 NKRFO15226 690 aaKnown RBP eCLIP23.76■■□□□ 1.39
APP-215ENST00000474136 ARIH2O95376 493 aa23.76■■□□□ 1.39
APP-215ENST00000474136 NOVP48745 357 aa23.76■■□□□ 1.39
APP-215ENST00000474136 WDR5P61964 334 aaKnown RBP23.76■■□□□ 1.39
APP-215ENST00000474136 DEFB103AP81534 67 aa23.76■■□□□ 1.39
APP-215ENST00000474136 PTPN11Q06124 597 aaPredicted RBP23.76■■□□□ 1.39
APP-215ENST00000474136 PWP2Q15269 919 aaKnown RBP23.76■■□□□ 1.39
APP-215ENST00000474136 LRRFIP1Q32MZ4 808 aaKnown RBP23.76■■□□□ 1.39
APP-215ENST00000474136 SCFD2Q8WU76 684 aa23.76■■□□□ 1.39
APP-215ENST00000474136 CTAGE1Q96RT6 745 aa23.76■■□□□ 1.39
APP-215ENST00000474136 KPNA6O60684 536 aa23.75■■□□□ 1.39
APP-215ENST00000474136 EDNRBP24530 442 aa23.75■■□□□ 1.39
APP-215ENST00000474136 PTGISQ16647 500 aa23.75■■□□□ 1.39
APP-215ENST00000474136 TCTN1Q2MV58 587 aa23.75■■□□□ 1.39
APP-215ENST00000474136 RNF207Q6ZRF8 634 aa23.75■■□□□ 1.39
APP-215ENST00000474136 FSD1Q9BTV5 496 aa23.75■■□□□ 1.39
APP-215ENST00000474136 MTUS1Q9ULD2 1270 aa23.75■■□□□ 1.39
APP-215ENST00000474136 TANC1Q9C0D5 1861 aa23.75■■□□□ 1.39
APP-215ENST00000474136 TXNP10599 105 aaKnown RBP23.74■■□□□ 1.39
APP-215ENST00000474136 RPS6P62753 249 aaKnown RBP23.74■■□□□ 1.39
APP-215ENST00000474136 ZBED2Q9BTP6 218 aa23.74■■□□□ 1.39
APP-215ENST00000474136 COL4A4P53420 1690 aaPredicted RBP23.73■■□□□ 1.39
APP-215ENST00000474136 PI4K2BG5E9Z4 385 aa23.73■■□□□ 1.39
APP-215ENST00000474136 GDF6Q6KF10 455 aaPredicted RBP23.73■■□□□ 1.39
APP-215ENST00000474136 PI4K2BQ8TCG2 481 aa23.73■■□□□ 1.39
APP-215ENST00000474136 OTUD7AQ8TE49 926 aaPredicted RBP23.73■■□□□ 1.39
APP-215ENST00000474136 DHX38Q92620 1227 aaKnown RBP23.73■■□□□ 1.39
APP-215ENST00000474136 SUGCTQ9HAC7 445 aa23.73■■□□□ 1.39
APP-215ENST00000474136 PTPRSQ13332 1948 aa23.72■■□□□ 1.39
APP-215ENST00000474136 VPS53Q5VIR6 699 aa23.72■■□□□ 1.39
APP-215ENST00000474136 AFAP1L1Q8TED9 768 aa23.72■■□□□ 1.39
APP-215ENST00000474136 AFG1LQ8WV93 481 aa23.72■■□□□ 1.39
APP-215ENST00000474136 TMEM47Q9BQJ4 181 aa23.72■■□□□ 1.39
APP-215ENST00000474136 LMCD1Q9NZU5 365 aa23.72■■□□□ 1.39
APP-215ENST00000474136 MUC6Q6W4X9 2439 aa23.71■■□□□ 1.39
APP-215ENST00000474136 CAGE1Q8TC20 777 aa23.71■■□□□ 1.39
APP-215ENST00000474136 UBE2ZQ9H832 354 aaPredicted RBP23.71■■□□□ 1.39
APP-215ENST00000474136 ORC4O43929 436 aa23.7■■□□□ 1.38
APP-215ENST00000474136 NBNO60934 754 aa23.7■■□□□ 1.38
APP-215ENST00000474136 SELPP16109 830 aa23.7■■□□□ 1.38
APP-215ENST00000474136 LRRC8DQ7L1W4 858 aa23.7■■□□□ 1.38
APP-215ENST00000474136 CCDC155Q8N6L0 562 aa23.7■■□□□ 1.38
APP-215ENST00000474136 DNERQ8NFT8 737 aa23.7■■□□□ 1.38
APP-215ENST00000474136 KAT2BQ92831 832 aa23.7■■□□□ 1.38
APP-215ENST00000474136 LNPKQ9C0E8 428 aa23.7■■□□□ 1.38
APP-215ENST00000474136 TOMM22Q9NS69 142 aa23.7■■□□□ 1.38
APP-215ENST00000474136 ANAPC4Q9UJX5 808 aa23.7■■□□□ 1.38
APP-215ENST00000474136 TRIP12Q14669 1992 aaPredicted RBP23.69■■□□□ 1.38
APP-215ENST00000474136 PIEZO1Q92508 2521 aa23.69■■□□□ 1.38
APP-215ENST00000474136 MMP3P08254 477 aa23.69■■□□□ 1.38
APP-215ENST00000474136 TOP1P11387 765 aaKnown RBP23.69■■□□□ 1.38
APP-215ENST00000474136 FAM117BQ6P1L5 589 aa23.69■■□□□ 1.38
APP-215ENST00000474136 CCDC62Q6P9F0 684 aa23.69■■□□□ 1.38
APP-215ENST00000474136 CNKSR3Q6P9H4 555 aa23.69■■□□□ 1.38
APP-215ENST00000474136 MPHOSPH6Q99547 160 aaKnown RBP23.69■■□□□ 1.38
APP-215ENST00000474136 TTC41PQ6P2S7 1318 aa23.69■■□□□ 1.38
APP-215ENST00000474136 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP23.68■■□□□ 1.38
APP-215ENST00000474136 LINC01553A4QN01 128 aa23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms