RNA–Protein interactions for RNA: ENST00000474088.1

PKD1-211, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 923 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-211ENST00000474088 ABCB11O95342 1321 aa28.99■■■□□ 2.23
PKD1-211ENST00000474088 A6NJR5 290 aa28.99■■■□□ 2.23
PKD1-211ENST00000474088 KPNA6O60684 536 aa28.99■■■□□ 2.23
PKD1-211ENST00000474088 ASPRV1Q53RT3 343 aa28.99■■■□□ 2.23
PKD1-211ENST00000474088 SCLYQ96I15 445 aa28.99■■■□□ 2.23
PKD1-211ENST00000474088 LAMA4Q16363 1823 aa28.99■■■□□ 2.23
PKD1-211ENST00000474088 CYP2C9P11712 490 aa28.98■■■□□ 2.23
PKD1-211ENST00000474088 TTLL4Q14679 1199 aa28.98■■■□□ 2.23
PKD1-211ENST00000474088 NBPF20Q3BBV1 942 aa28.98■■■□□ 2.23
PKD1-211ENST00000474088 VWCEQ96DN2 955 aa28.98■■■□□ 2.23
PKD1-211ENST00000474088 KRT23Q9C075 422 aa28.98■■■□□ 2.23
PKD1-211ENST00000474088 TAAR1Q96RJ0 339 aa28.97■■■□□ 2.23
PKD1-211ENST00000474088 UNC80Q8N2C7 3258 aa28.96■■■□□ 2.23
PKD1-211ENST00000474088 ARIH2O95376 493 aa28.96■■■□□ 2.23
PKD1-211ENST00000474088 PARP1P09874 1014 aaKnown RBP28.96■■■□□ 2.23
PKD1-211ENST00000474088 QRICH1Q2TAL8 776 aa28.96■■■□□ 2.23
PKD1-211ENST00000474088 FAM47CQ5HY64 1035 aa28.96■■■□□ 2.23
PKD1-211ENST00000474088 NFRKBQ6P4R8 1299 aa28.96■■■□□ 2.23
PKD1-211ENST00000474088 MCF2L2Q86YR7 1114 aa28.96■■■□□ 2.23
PKD1-211ENST00000474088 SYTL5Q8TDW5 730 aaPredicted RBP28.96■■■□□ 2.23
PKD1-211ENST00000474088 GAS2L1Q99501 681 aaPredicted RBP28.96■■■□□ 2.23
PKD1-211ENST00000474088 PRDM12Q9H4Q4 367 aa28.96■■■□□ 2.23
PKD1-211ENST00000474088 CNNM2Q9H8M5 875 aa28.96■■■□□ 2.23
PKD1-211ENST00000474088 VAT1LQ9HCJ6 419 aa28.96■■■□□ 2.23
PKD1-211ENST00000474088 CCDC62Q6P9F0 684 aa28.95■■■□□ 2.22
PKD1-211ENST00000474088 USP38Q8NB14 1042 aa28.95■■■□□ 2.22
PKD1-211ENST00000474088 NSUN6Q8TEA1 469 aaKnown RBP28.95■■■□□ 2.22
PKD1-211ENST00000474088 NKX2-4Q9H2Z4 354 aa28.95■■■□□ 2.22
PKD1-211ENST00000474088 JMJD4Q9H9V9 463 aa28.95■■■□□ 2.22
PKD1-211ENST00000474088 COL20A1Q9P218 1284 aa28.95■■■□□ 2.22
PKD1-211ENST00000474088 SLC4A7Q9Y6M7 1214 aa28.95■■■□□ 2.22
PKD1-211ENST00000474088 DHX16O60231 1041 aaKnown RBP28.94■■■□□ 2.22
PKD1-211ENST00000474088 PTPN11Q06124 597 aaPredicted RBP28.94■■■□□ 2.22
PKD1-211ENST00000474088 FBXO11Q86XK2 927 aa28.94■■■□□ 2.22
PKD1-211ENST00000474088 PPP1R13LQ8WUF5 828 aa28.94■■■□□ 2.22
PKD1-211ENST00000474088 UBAC1Q9BSL1 405 aa28.94■■■□□ 2.22
PKD1-211ENST00000474088 IL25Q9H293 177 aa28.94■■■□□ 2.22
PKD1-211ENST00000474088 SLC28A3Q9HAS3 691 aa28.94■■■□□ 2.22
PKD1-211ENST00000474088 YBX2Q9Y2T7 364 aaKnown RBP28.94■■■□□ 2.22
PKD1-211ENST00000474088 MRPL11Q9Y3B7 192 aaKnown RBP28.94■■■□□ 2.22
PKD1-211ENST00000474088 PFKMP08237 780 aa28.93■■■□□ 2.22
PKD1-211ENST00000474088 SEPT14Q6ZU15 432 aa28.93■■■□□ 2.22
PKD1-211ENST00000474088 IWS1Q96ST2 819 aa28.93■■■□□ 2.22
PKD1-211ENST00000474088 STXBP2Q15833 593 aa28.92■■■□□ 2.22
PKD1-211ENST00000474088 RMDN3Q96TC7 470 aa28.92■■■□□ 2.22
PKD1-211ENST00000474088 CDH23Q9H251 3354 aa28.92■■■□□ 2.22
PKD1-211ENST00000474088 ZBBXA8MT70 800 aa28.91■■■□□ 2.22
PKD1-211ENST00000474088 RABGGTBP53611 331 aa28.91■■■□□ 2.22
PKD1-211ENST00000474088 LY6KQ17RY6 165 aa28.91■■■□□ 2.22
PKD1-211ENST00000474088 IFIT1BQ5T764 474 aaKnown RBP28.91■■■□□ 2.22
PKD1-211ENST00000474088 DEFB128Q7Z7B8 93 aa28.91■■■□□ 2.22
PKD1-211ENST00000474088 SCN10AQ9Y5Y9 1956 aa28.91■■■□□ 2.22
PKD1-211ENST00000474088 EYSQ5T1H1 3165 aa28.9■■■□□ 2.22
PKD1-211ENST00000474088 GH1P01241 217 aa28.9■■■□□ 2.22
PKD1-211ENST00000474088 SEC23AQ15436 765 aa28.9■■■□□ 2.22
PKD1-211ENST00000474088 STAG2Q8N3U4 1231 aa28.9■■■□□ 2.22
PKD1-211ENST00000474088 AFG1LQ8WV93 481 aa28.9■■■□□ 2.22
PKD1-211ENST00000474088 PITPNM1O00562 1244 aa28.89■■■□□ 2.22
PKD1-211ENST00000474088 RFC2P35250 354 aa28.89■■■□□ 2.22
PKD1-211ENST00000474088 ARHGAP1Q07960 439 aa28.89■■■□□ 2.22
PKD1-211ENST00000474088 ADGRE1Q14246 886 aa28.89■■■□□ 2.22
PKD1-211ENST00000474088 ARHGEF16Q5VV41 709 aa28.89■■■□□ 2.22
PKD1-211ENST00000474088 RETREG2Q8NC44 543 aa28.89■■■□□ 2.22
PKD1-211ENST00000474088 PPM1EQ8WY54 764 aa28.89■■■□□ 2.22
PKD1-211ENST00000474088 SYMPKQ92797 1274 aaKnown RBP28.89■■■□□ 2.22
PKD1-211ENST00000474088 AMNQ9BXJ7 453 aa28.89■■■□□ 2.22
PKD1-211ENST00000474088 PCDHA11Q9Y5I1 949 aa28.89■■■□□ 2.22
PKD1-211ENST00000474088 CFBP00751 764 aa28.88■■■□□ 2.21
PKD1-211ENST00000474088 MMP3P08254 477 aa28.88■■■□□ 2.21
PKD1-211ENST00000474088 IQCF3P0C7M6 154 aa28.88■■■□□ 2.21
PKD1-211ENST00000474088 ATP2A2P16615 1042 aaKnown RBP28.88■■■□□ 2.21
PKD1-211ENST00000474088 PDE4AP27815 886 aa28.88■■■□□ 2.21
PKD1-211ENST00000474088 CHMP4BP1P59074 171 aa28.88■■■□□ 2.21
PKD1-211ENST00000474088 TTC22Q5TAA0 569 aa28.88■■■□□ 2.21
PKD1-211ENST00000474088 CYB5R4Q7L1T6 521 aa28.88■■■□□ 2.21
PKD1-211ENST00000474088 KLRF2D3W0D1 207 aa28.87■■■□□ 2.21
PKD1-211ENST00000474088 EIF3JO75822 258 aaKnown RBP28.87■■■□□ 2.21
PKD1-211ENST00000474088 ACTN1P12814 892 aa28.87■■■□□ 2.21
PKD1-211ENST00000474088 GSPT1P15170 499 aaKnown RBP28.87■■■□□ 2.21
PKD1-211ENST00000474088 MYOGP15173 224 aa28.87■■■□□ 2.21
PKD1-211ENST00000474088 EIF2AK2P19525 551 aaKnown RBP28.87■■■□□ 2.21
PKD1-211ENST00000474088 BFSP2Q13515 415 aa28.87■■■□□ 2.21
PKD1-211ENST00000474088 CHST3Q7LGC8 479 aa28.87■■■□□ 2.21
PKD1-211ENST00000474088 MTMR8Q96EF0 704 aa28.87■■■□□ 2.21
PKD1-211ENST00000474088 PRDM6Q9NQX0 595 aa28.87■■■□□ 2.21
PKD1-211ENST00000474088 DDX41Q9UJV9 622 aaKnown RBP28.87■■■□□ 2.21
PKD1-211ENST00000474088 NOD1Q9Y239 953 aa28.87■■■□□ 2.21
PKD1-211ENST00000474088 GBF1Q92538 1859 aa28.87■■■□□ 2.21
PKD1-211ENST00000474088 OPLAHO14841 1288 aa28.86■■■□□ 2.21
PKD1-211ENST00000474088 NR3C2P08235 984 aa28.86■■■□□ 2.21
PKD1-211ENST00000474088 CASTP20810 708 aaKnown RBP28.86■■■□□ 2.21
PKD1-211ENST00000474088 HSD17B4P51659 736 aa28.86■■■□□ 2.21
PKD1-211ENST00000474088 PXMP2Q9NR77 195 aa28.86■■■□□ 2.21
PKD1-211ENST00000474088 MAD2L2Q9UI95 211 aa28.86■■■□□ 2.21
PKD1-211ENST00000474088 PALM3A6NDB9 673 aaPredicted RBP28.85■■■□□ 2.21
PKD1-211ENST00000474088 IGFBP4P22692 258 aa28.85■■■□□ 2.21
PKD1-211ENST00000474088 GHRHRQ02643 423 aa28.85■■■□□ 2.21
PKD1-211ENST00000474088 PTGISQ16647 500 aa28.85■■■□□ 2.21
PKD1-211ENST00000474088 PPP2R2DQ66LE6 453 aa28.85■■■□□ 2.21
PKD1-211ENST00000474088 SESTD1Q86VW0 696 aa28.85■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms