RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 GHRHRQ02643 423 aa15.82■□□□□ 0.12
USF1-205ENST00000473969 FUT2Q10981 343 aa15.82■□□□□ 0.12
USF1-205ENST00000473969 PPP1R18Q6NYC8 613 aa15.82■□□□□ 0.12
USF1-205ENST00000473969 CCDC12Q8WUD4 166 aaPredicted RBP15.82■□□□□ 0.12
USF1-205ENST00000473969 PAWRQ96IZ0 340 aaKnown RBP15.82■□□□□ 0.12
USF1-205ENST00000473969 SLC26A6Q9BXS9 759 aa15.82■□□□□ 0.12
USF1-205ENST00000473969 RNF26Q9BY78 433 aaPredicted RBP15.82■□□□□ 0.12
USF1-205ENST00000473969 AP5M1Q9H0R1 490 aa15.82■□□□□ 0.12
USF1-205ENST00000473969 GLT8D2Q9H1C3 349 aa15.82■□□□□ 0.12
USF1-205ENST00000473969 EHMT1Q9H9B1 1298 aa15.82■□□□□ 0.12
USF1-205ENST00000473969 PXMP2Q9NR77 195 aa15.82■□□□□ 0.12
USF1-205ENST00000473969 PCDH10Q9P2E7 1040 aa15.82■□□□□ 0.12
USF1-205ENST00000473969 ASTN1O14525 1302 aa15.82■□□□□ 0.12
USF1-205ENST00000473969 BAZ2BQ9UIF8 2168 aaKnown RBP15.82■□□□□ 0.12
USF1-205ENST00000473969 SMCHD1A6NHR9 2005 aa15.81■□□□□ 0.12
USF1-205ENST00000473969 DUSP11O75319 330 aaKnown RBP15.81■□□□□ 0.12
USF1-205ENST00000473969 NR3C2P08235 984 aa15.81■□□□□ 0.12
USF1-205ENST00000473969 MYCLP12524 364 aaPredicted RBP15.81■□□□□ 0.12
USF1-205ENST00000473969 SCG2P13521 617 aa15.81■□□□□ 0.12
USF1-205ENST00000473969 ADCYAP1R1P41586 468 aa15.81■□□□□ 0.12
USF1-205ENST00000473969 PFKFB3Q16875 520 aaPredicted RBP15.81■□□□□ 0.12
USF1-205ENST00000473969 GJC2Q5T442 439 aaPredicted RBP15.81■□□□□ 0.12
USF1-205ENST00000473969 WWC2Q6AWC2 1192 aa15.81■□□□□ 0.12
USF1-205ENST00000473969 RBBP6Q7Z6E9 1792 aaKnown RBP15.81■□□□□ 0.12
USF1-205ENST00000473969 PHKBQ93100 1093 aa15.81■□□□□ 0.12
USF1-205ENST00000473969 C11orf49Q9H6J7 331 aa15.81■□□□□ 0.12
USF1-205ENST00000473969 BARHL2Q9NY43 387 aa15.81■□□□□ 0.12
USF1-205ENST00000473969 COL20A1Q9P218 1284 aa15.81■□□□□ 0.12
USF1-205ENST00000473969 SPDYE3A6NKU9 549 aa15.8■□□□□ 0.12
USF1-205ENST00000473969 PIK3CDO00329 1044 aa15.8■□□□□ 0.12
USF1-205ENST00000473969 DNM1LO00429 736 aa15.8■□□□□ 0.12
USF1-205ENST00000473969 EIF3JO75822 258 aaKnown RBP15.8■□□□□ 0.12
USF1-205ENST00000473969 PGK1P00558 417 aa15.8■□□□□ 0.12
USF1-205ENST00000473969 EDNRBP24530 442 aa15.8■□□□□ 0.12
USF1-205ENST00000473969 CCND2P30279 289 aa15.8■□□□□ 0.12
USF1-205ENST00000473969 RBM25P49756 843 aaKnown RBP15.8■□□□□ 0.12
USF1-205ENST00000473969 ADCY7P51828 1080 aa15.8■□□□□ 0.12
USF1-205ENST00000473969 USP17L6PQ6QN14 398 aa15.8■□□□□ 0.12
USF1-205ENST00000473969 SCFD2Q8WU76 684 aa15.8■□□□□ 0.12
USF1-205ENST00000473969 PDCD2LQ9BRP1 358 aa15.8■□□□□ 0.12
USF1-205ENST00000473969 WDR11Q9BZH6 1224 aa15.8■□□□□ 0.12
USF1-205ENST00000473969 KATNBL1Q9H079 304 aa15.8■□□□□ 0.12
USF1-205ENST00000473969 DDX49Q9Y6V7 483 aaKnown RBP15.8■□□□□ 0.12
USF1-205ENST00000473969 SMCO2A6NFE2 343 aa15.79■□□□□ 0.12
USF1-205ENST00000473969 NKRFO15226 690 aaKnown RBP eCLIP15.79■□□□□ 0.12
USF1-205ENST00000473969 ZEB2O60315 1214 aa15.79■□□□□ 0.12
USF1-205ENST00000473969 PFKFB2O60825 505 aa15.79■□□□□ 0.12
USF1-205ENST00000473969 C6orf222P0C671 652 aaPredicted RBP15.79■□□□□ 0.12
USF1-205ENST00000473969 TTLL4Q14679 1199 aa15.79■□□□□ 0.12
USF1-205ENST00000473969 LRRC41Q15345 812 aa15.79■□□□□ 0.12
USF1-205ENST00000473969 NTRK3Q16288 839 aa15.79■□□□□ 0.12
USF1-205ENST00000473969 TAPT1Q6NXT6 567 aa15.79■□□□□ 0.12
USF1-205ENST00000473969 SEPT14Q6ZU15 432 aa15.79■□□□□ 0.12
USF1-205ENST00000473969 TEX2Q8IWB9 1127 aa15.79■□□□□ 0.12
USF1-205ENST00000473969 CCDC148Q8NFR7 591 aa15.79■□□□□ 0.12
USF1-205ENST00000473969 DIS3LQ8TF46 1054 aaKnown RBP15.79■□□□□ 0.12
USF1-205ENST00000473969 DPF3Q92784 378 aa15.79■□□□□ 0.12
USF1-205ENST00000473969 C6orf50Q9HD87 102 aa15.79■□□□□ 0.12
USF1-205ENST00000473969 PDGFCQ9NRA1 345 aa15.79■□□□□ 0.12
USF1-205ENST00000473969 TPCN1Q9ULQ1 816 aa15.79■□□□□ 0.12
USF1-205ENST00000473969 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.78■□□□□ 0.12
USF1-205ENST00000473969 STXBP3O00186 592 aa15.78■□□□□ 0.12
USF1-205ENST00000473969 MEIS2O14770 477 aa15.78■□□□□ 0.12
USF1-205ENST00000473969 DYNC1LI2O43237 492 aaPredicted RBP15.78■□□□□ 0.12
USF1-205ENST00000473969 PPFIA3O75145 1194 aa15.78■□□□□ 0.12
USF1-205ENST00000473969 GNA11P29992 359 aa15.78■□□□□ 0.12
USF1-205ENST00000473969 PGM5Q15124 567 aa15.78■□□□□ 0.12
USF1-205ENST00000473969 RABEP1Q15276 862 aa15.78■□□□□ 0.12
USF1-205ENST00000473969 BRDTQ58F21 947 aaPredicted RBP15.78■□□□□ 0.12
USF1-205ENST00000473969 TLK2Q86UE8 772 aa15.78■□□□□ 0.12
USF1-205ENST00000473969 PCSK9Q8NBP7 692 aaKnown RBP15.78■□□□□ 0.12
USF1-205ENST00000473969 IL27Q8NEV9 243 aa15.78■□□□□ 0.12
USF1-205ENST00000473969 LENG1Q96BZ8 264 aaPredicted RBP15.78■□□□□ 0.12
USF1-205ENST00000473969 SENP6Q9GZR1 1112 aaPredicted RBP15.78■□□□□ 0.12
USF1-205ENST00000473969 RIC8AQ9NPQ8 531 aa15.78■□□□□ 0.12
USF1-205ENST00000473969 LIMCH1Q9UPQ0 1083 aa15.78■□□□□ 0.12
USF1-205ENST00000473969 Q9Y3F1 56 aa15.78■□□□□ 0.12
USF1-205ENST00000473969 SYNRGQ9UMZ2 1314 aa15.77■□□□□ 0.12
USF1-205ENST00000473969 RBM47A0AV96 593 aaKnown RBP15.77■□□□□ 0.12
USF1-205ENST00000473969 ST18O60284 1047 aa15.77■□□□□ 0.12
USF1-205ENST00000473969 STAM2O75886 525 aa15.77■□□□□ 0.12
USF1-205ENST00000473969 DEXIO95424 95 aa15.77■□□□□ 0.12
USF1-205ENST00000473969 FOSP01100 380 aaPredicted RBP15.77■□□□□ 0.12
USF1-205ENST00000473969 TXNP10599 105 aaKnown RBP15.77■□□□□ 0.12
USF1-205ENST00000473969 SMPD1P17405 629 aa15.77■□□□□ 0.12
USF1-205ENST00000473969 XBP1P17861 261 aa15.77■□□□□ 0.12
USF1-205ENST00000473969 GJA9P57773 515 aa15.77■□□□□ 0.12
USF1-205ENST00000473969 SCRN1Q12765 414 aa15.77■□□□□ 0.12
USF1-205ENST00000473969 UBE2SQ16763 222 aa15.77■□□□□ 0.12
USF1-205ENST00000473969 GNPTABQ3T906 1256 aa15.77■□□□□ 0.12
USF1-205ENST00000473969 DUSP28Q4G0W2 176 aa15.77■□□□□ 0.12
USF1-205ENST00000473969 GNASQ5JWF2 1037 aa15.77■□□□□ 0.12
USF1-205ENST00000473969 MCTP2Q6DN12 878 aa15.77■□□□□ 0.12
USF1-205ENST00000473969 XRRA1Q6P2D8 792 aa15.77■□□□□ 0.12
USF1-205ENST00000473969 KCNV1Q6PIU1 500 aa15.77■□□□□ 0.12
USF1-205ENST00000473969 UBE2Q1Q7Z7E8 422 aa15.77■□□□□ 0.12
USF1-205ENST00000473969 VSIG10LQ86VR7 867 aa15.77■□□□□ 0.12
USF1-205ENST00000473969 BICD2Q8TD16 824 aa15.77■□□□□ 0.12
USF1-205ENST00000473969 ZSCAN31Q96LW9 406 aaPredicted RBP15.77■□□□□ 0.12
USF1-205ENST00000473969 TSEN34Q9BSV6 310 aaKnown RBP15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms