RNA–Protein interactions for RNA: ENST00000473916.1

VARS2-206, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 2,000 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-206ENST00000473916 WDR46O15213 610 aaKnown RBP20.28■□□□□ 0.84
VARS2-206ENST00000473916 RPN1P04843 607 aaKnown RBP20.28■□□□□ 0.84
VARS2-206ENST00000473916 PTPRAP18433 802 aa20.28■□□□□ 0.84
VARS2-206ENST00000473916 SREBF1P36956 1147 aa20.28■□□□□ 0.84
VARS2-206ENST00000473916 DHX8Q14562 1220 aaKnown RBP20.28■□□□□ 0.84
VARS2-206ENST00000473916 ECM1Q16610 540 aa20.28■□□□□ 0.84
VARS2-206ENST00000473916 PRR16Q569H4 304 aa20.28■□□□□ 0.84
VARS2-206ENST00000473916 LENG9Q96B70 501 aa20.28■□□□□ 0.84
VARS2-206ENST00000473916 MRFAP1L1Q96HT8 127 aa20.28■□□□□ 0.84
VARS2-206ENST00000473916 XPO4Q9C0E2 1151 aaKnown RBP20.28■□□□□ 0.84
VARS2-206ENST00000473916 COL11A1P12107 1806 aaPredicted RBP20.28■□□□□ 0.84
VARS2-206ENST00000473916 CYP3A7-CYP3A51PA0A087WV96 503 aa20.27■□□□□ 0.84
VARS2-206ENST00000473916 PPP1R3GB7ZBB8 358 aa20.27■□□□□ 0.84
VARS2-206ENST00000473916 PIK3CDO00329 1044 aa20.27■□□□□ 0.84
VARS2-206ENST00000473916 CYP3A7P24462 503 aa20.27■□□□□ 0.84
VARS2-206ENST00000473916 STX17P56962 302 aa20.27■□□□□ 0.84
VARS2-206ENST00000473916 UBXN2AP68543 259 aa20.27■□□□□ 0.84
VARS2-206ENST00000473916 C9orf131Q5VYM1 1079 aa20.27■□□□□ 0.84
VARS2-206ENST00000473916 CCDC186Q7Z3E2 898 aa20.27■□□□□ 0.84
VARS2-206ENST00000473916 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.27■□□□□ 0.84
VARS2-206ENST00000473916 LPAR1Q92633 364 aa20.27■□□□□ 0.84
VARS2-206ENST00000473916 MBOAT7Q96N66 472 aa20.27■□□□□ 0.84
VARS2-206ENST00000473916 SLF1Q9BQI6 1058 aa20.27■□□□□ 0.84
VARS2-206ENST00000473916 KCNMB3Q9NPA1 279 aa20.27■□□□□ 0.84
VARS2-206ENST00000473916 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.27■□□□□ 0.84
VARS2-206ENST00000473916 GDAQ9Y2T3 454 aa20.27■□□□□ 0.84
VARS2-206ENST00000473916 STAT3P40763 770 aa20.27■□□□□ 0.84
VARS2-206ENST00000473916 KCNK18Q7Z418 384 aa20.27■□□□□ 0.84
VARS2-206ENST00000473916 WNK4Q96J92 1243 aa20.27■□□□□ 0.84
VARS2-206ENST00000473916 ZFP91Q96JP5 570 aaPredicted RBP20.27■□□□□ 0.84
VARS2-206ENST00000473916 BLOC1S4Q9NUP1 217 aa20.27■□□□□ 0.84
VARS2-206ENST00000473916 NFE2L3Q9Y4A8 694 aa20.27■□□□□ 0.84
VARS2-206ENST00000473916 RLFQ13129 1914 aa20.27■□□□□ 0.84
VARS2-206ENST00000473916 KLRC4O43908 158 aa20.26■□□□□ 0.83
VARS2-206ENST00000473916 MARCH6O60337 910 aa20.26■□□□□ 0.83
VARS2-206ENST00000473916 MSNP26038 577 aaKnown RBP20.26■□□□□ 0.83
VARS2-206ENST00000473916 CDC25BP30305 580 aa20.26■□□□□ 0.83
VARS2-206ENST00000473916 FANCCQ00597 558 aa20.26■□□□□ 0.83
VARS2-206ENST00000473916 ETNPPLQ8TBG4 499 aa20.26■□□□□ 0.83
VARS2-206ENST00000473916 SNX29Q8TEQ0 813 aa20.26■□□□□ 0.83
VARS2-206ENST00000473916 KLRG1Q96E93 195 aa20.26■□□□□ 0.83
VARS2-206ENST00000473916 RPAP3Q9H6T3 665 aaPredicted RBP20.26■□□□□ 0.83
VARS2-206ENST00000473916 CCPG1Q9ULG6 757 aa20.26■□□□□ 0.83
VARS2-206ENST00000473916 OTOFQ9HC10 1997 aa20.26■□□□□ 0.83
VARS2-206ENST00000473916 ADM5C9JUS6 153 aa20.26■□□□□ 0.83
VARS2-206ENST00000473916 FLOT1O75955 427 aa20.26■□□□□ 0.83
VARS2-206ENST00000473916 FOSP01100 380 aaPredicted RBP20.26■□□□□ 0.83
VARS2-206ENST00000473916 PDIA5Q14554 519 aa20.26■□□□□ 0.83
VARS2-206ENST00000473916 PTPN21Q16825 1174 aa20.26■□□□□ 0.83
VARS2-206ENST00000473916 CPXCR1Q8N123 301 aa20.26■□□□□ 0.83
VARS2-206ENST00000473916 PRPF38AQ8NAV1 312 aaKnown RBP20.26■□□□□ 0.83
VARS2-206ENST00000473916 HOOK2Q96ED9 719 aa20.26■□□□□ 0.83
VARS2-206ENST00000473916 CALML4Q96GE6 196 aa20.26■□□□□ 0.83
VARS2-206ENST00000473916 GINM1Q9NU53 330 aa20.26■□□□□ 0.83
VARS2-206ENST00000473916 DACH1Q9UI36 760 aa20.26■□□□□ 0.83
VARS2-206ENST00000473916 PCDHA12Q9UN75 941 aa20.26■□□□□ 0.83
VARS2-206ENST00000473916 MAPK8IP1Q9UQF2 711 aa20.26■□□□□ 0.83
VARS2-206ENST00000473916 TPM4P67936 248 aa20.25■□□□□ 0.83
VARS2-206ENST00000473916 ARID5BQ14865 1188 aa20.25■□□□□ 0.83
VARS2-206ENST00000473916 KMT5BQ4FZB7 885 aa20.25■□□□□ 0.83
VARS2-206ENST00000473916 SLC30A10Q6XR72 485 aa20.25■□□□□ 0.83
VARS2-206ENST00000473916 ENOX1Q8TC92 643 aaKnown RBP20.25■□□□□ 0.83
VARS2-206ENST00000473916 RAVER2Q9HCJ3 691 aaKnown RBP20.25■□□□□ 0.83
VARS2-206ENST00000473916 PICK1Q9NRD5 415 aa20.25■□□□□ 0.83
VARS2-206ENST00000473916 SAMSN1Q9NSI8 373 aaKnown RBP20.25■□□□□ 0.83
VARS2-206ENST00000473916 CTNND2Q9UQB3 1225 aa20.25■□□□□ 0.83
VARS2-206ENST00000473916 ZHX2Q9Y6X8 837 aa20.25■□□□□ 0.83
VARS2-206ENST00000473916 WDR90Q96KV7 1748 aa20.24■□□□□ 0.83
VARS2-206ENST00000473916 GCOM1H8Y6P7 765 aaPredicted RBP20.24■□□□□ 0.83
VARS2-206ENST00000473916 NFIBO00712 420 aa20.24■□□□□ 0.83
VARS2-206ENST00000473916 ICAM1P05362 532 aa20.24■□□□□ 0.83
VARS2-206ENST00000473916 POLR2MP0CAP2 368 aa20.24■□□□□ 0.83
VARS2-206ENST00000473916 HMGCS2P54868 508 aa20.24■□□□□ 0.83
VARS2-206ENST00000473916 LRMPQ12912 555 aa20.24■□□□□ 0.83
VARS2-206ENST00000473916 MCM6Q14566 821 aa20.24■□□□□ 0.83
VARS2-206ENST00000473916 C17orf53Q8N3J3 647 aaPredicted RBP20.24■□□□□ 0.83
VARS2-206ENST00000473916 NAP1L4Q99733 375 aaKnown RBP20.24■□□□□ 0.83
VARS2-206ENST00000473916 MRPL11Q9Y3B7 192 aaKnown RBP20.24■□□□□ 0.83
VARS2-206ENST00000473916 BACE1P56817 501 aa20.24■□□□□ 0.83
VARS2-206ENST00000473916 MOXD1Q6UVY6 613 aa20.24■□□□□ 0.83
VARS2-206ENST00000473916 ZNF280CQ8ND82 737 aa20.24■□□□□ 0.83
VARS2-206ENST00000473916 WDR18Q9BV38 432 aa20.24■□□□□ 0.83
VARS2-206ENST00000473916 RAB34Q9BZG1 259 aa20.24■□□□□ 0.83
VARS2-206ENST00000473916 TRIM9Q9C026 710 aa20.24■□□□□ 0.83
VARS2-206ENST00000473916 ADARB2Q9NS39 739 aaKnown RBP20.24■□□□□ 0.83
VARS2-206ENST00000473916 HOMER2Q9NSB8 354 aa20.24■□□□□ 0.83
VARS2-206ENST00000473916 ABCB11O95342 1321 aa20.24■□□□□ 0.83
VARS2-206ENST00000473916 SYNRGQ9UMZ2 1314 aa20.24■□□□□ 0.83
VARS2-206ENST00000473916 ERCC5P28715 1186 aaPredicted RBP20.23■□□□□ 0.83
VARS2-206ENST00000473916 Q4G0T1 1027 aa20.23■□□□□ 0.83
VARS2-206ENST00000473916 KRT79Q5XKE5 535 aa20.23■□□□□ 0.83
VARS2-206ENST00000473916 RBBP6Q7Z6E9 1792 aaKnown RBP20.23■□□□□ 0.83
VARS2-206ENST00000473916 CUEDC2Q9H467 287 aa20.23■□□□□ 0.83
VARS2-206ENST00000473916 SLC38A10Q9HBR0 1119 aa20.23■□□□□ 0.83
VARS2-206ENST00000473916 PPP1R9AQ9ULJ8 1098 aa20.23■□□□□ 0.83
VARS2-206ENST00000473916 PAPPA2Q9BXP8 1791 aa20.23■□□□□ 0.83
VARS2-206ENST00000473916 GOLGA6L6A8MZA4 724 aa20.22■□□□□ 0.83
VARS2-206ENST00000473916 MSH4O15457 936 aa20.22■□□□□ 0.83
VARS2-206ENST00000473916 ZNF18P17022 549 aa20.22■□□□□ 0.83
VARS2-206ENST00000473916 SPIRE1Q08AE8 756 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms