RNA–Protein interactions for RNA: ENST00000473643.1

SMG5-203, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG5, Length 541 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-203ENST00000473643 CHST13Q8NET6 341 aa10.45□□□□□ -0.74
SMG5-203ENST00000473643 CCDC148Q8NFR7 591 aa10.45□□□□□ -0.74
SMG5-203ENST00000473643 GPKOWQ92917 476 aaPredicted RBP eCLIP10.45□□□□□ -0.74
SMG5-203ENST00000473643 AGBL1Q96MI9 1066 aa10.45□□□□□ -0.74
SMG5-203ENST00000473643 TINF2Q9BSI4 451 aa10.45□□□□□ -0.74
SMG5-203ENST00000473643 PHF20Q9BVI0 1012 aa10.45□□□□□ -0.74
SMG5-203ENST00000473643 GLT8D2Q9H1C3 349 aa10.45□□□□□ -0.74
SMG5-203ENST00000473643 VPS54Q9P1Q0 977 aa10.45□□□□□ -0.74
SMG5-203ENST00000473643 FBXO40Q9UH90 709 aa10.45□□□□□ -0.74
SMG5-203ENST00000473643 CIZ1Q9ULV3 898 aaPredicted RBP10.45□□□□□ -0.74
SMG5-203ENST00000473643 MRPL11Q9Y3B7 192 aaKnown RBP10.45□□□□□ -0.74
SMG5-203ENST00000473643 CTDP1Q9Y5B0 961 aaPredicted RBP10.45□□□□□ -0.74
SMG5-203ENST00000473643 NR2E3Q9Y5X4 410 aa10.45□□□□□ -0.74
SMG5-203ENST00000473643 SEPT4O43236 478 aa10.44□□□□□ -0.74
SMG5-203ENST00000473643 STX6O43752 255 aa10.44□□□□□ -0.74
SMG5-203ENST00000473643 MMP1P03956 469 aa10.44□□□□□ -0.74
SMG5-203ENST00000473643 CALML3P27482 149 aa10.44□□□□□ -0.74
SMG5-203ENST00000473643 CNGA1P29973 690 aa10.44□□□□□ -0.74
SMG5-203ENST00000473643 GNA11P29992 359 aa10.44□□□□□ -0.74
SMG5-203ENST00000473643 NAPAP54920 295 aa10.44□□□□□ -0.74
SMG5-203ENST00000473643 TRIM29Q14134 588 aa10.44□□□□□ -0.74
SMG5-203ENST00000473643 NPY5RQ15761 445 aa10.44□□□□□ -0.74
SMG5-203ENST00000473643 PRAMEF19Q5SWL8 479 aa10.44□□□□□ -0.74
SMG5-203ENST00000473643 MAMDC4Q6UXC1 1216 aa10.44□□□□□ -0.74
SMG5-203ENST00000473643 DAGLBQ8NCG7 672 aa10.44□□□□□ -0.74
SMG5-203ENST00000473643 CLEC4DQ8WXI8 215 aa10.44□□□□□ -0.74
SMG5-203ENST00000473643 C11orf49Q9H6J7 331 aa10.44□□□□□ -0.74
SMG5-203ENST00000473643 C6orf50Q9HD87 102 aa10.44□□□□□ -0.74
SMG5-203ENST00000473643 GJB4Q9NTQ9 266 aa10.44□□□□□ -0.74
SMG5-203ENST00000473643 MAP3K20Q9NYL2 800 aaKnown RBP10.44□□□□□ -0.74
SMG5-203ENST00000473643 CCPG1Q9ULG6 757 aa10.44□□□□□ -0.74
SMG5-203ENST00000473643 MTMR6Q9Y217 621 aa10.44□□□□□ -0.74
SMG5-203ENST00000473643 PFASO15067 1338 aa10.43□□□□□ -0.74
SMG5-203ENST00000473643 SMCO2A6NFE2 343 aa10.43□□□□□ -0.74
SMG5-203ENST00000473643 M0R2N6 131 aa10.43□□□□□ -0.74
SMG5-203ENST00000473643 PIK3CDO00329 1044 aa10.43□□□□□ -0.74
SMG5-203ENST00000473643 OPLAHO14841 1288 aa10.43□□□□□ -0.74
SMG5-203ENST00000473643 EVI5O60447 810 aa10.43□□□□□ -0.74
SMG5-203ENST00000473643 MRPL12P52815 198 aaKnown RBP10.43□□□□□ -0.74
SMG5-203ENST00000473643 NLRP5P59047 1200 aa10.43□□□□□ -0.74
SMG5-203ENST00000473643 NUCB2P80303 420 aa10.43□□□□□ -0.74
SMG5-203ENST00000473643 USH1GQ495M9 461 aa10.43□□□□□ -0.74
SMG5-203ENST00000473643 ZNF467Q7Z7K2 595 aaPredicted RBP10.43□□□□□ -0.74
SMG5-203ENST00000473643 MCF2L2Q86YR7 1114 aa10.43□□□□□ -0.74
SMG5-203ENST00000473643 PSTPIP2Q9H939 334 aa10.43□□□□□ -0.74
SMG5-203ENST00000473643 RIC8AQ9NPQ8 531 aa10.43□□□□□ -0.74
SMG5-203ENST00000473643 PCDHA4Q9UN74 947 aa10.43□□□□□ -0.74
SMG5-203ENST00000473643 KCNJ14Q9UNX9 436 aa10.43□□□□□ -0.74
SMG5-203ENST00000473643 SZT2Q5T011 3432 aa10.43□□□□□ -0.74
SMG5-203ENST00000473643 DNAH12Q6ZR08 3092 aa10.42□□□□□ -0.74
SMG5-203ENST00000473643 ZNF236Q9UL36 1845 aa10.42□□□□□ -0.74
SMG5-203ENST00000473643 SYNGAP1Q96PV0 1343 aa10.42□□□□□ -0.74
SMG5-203ENST00000473643 H3BQV1 296 aa10.42□□□□□ -0.74
SMG5-203ENST00000473643 DNM1LO00429 736 aa10.42□□□□□ -0.74
SMG5-203ENST00000473643 MEIS2O14770 477 aa10.42□□□□□ -0.74
SMG5-203ENST00000473643 BRD1O95696 1058 aa10.42□□□□□ -0.74
SMG5-203ENST00000473643 SNAI1O95863 264 aaPredicted RBP10.42□□□□□ -0.74
SMG5-203ENST00000473643 ZNF865P0CJ78 1059 aaPredicted RBP10.42□□□□□ -0.74
SMG5-203ENST00000473643 ALAS1P13196 640 aa10.42□□□□□ -0.74
SMG5-203ENST00000473643 TAL1P17542 331 aaPredicted RBP10.42□□□□□ -0.74
SMG5-203ENST00000473643 U2AF2P26368 475 aaKnown RBP eCLIP10.42□□□□□ -0.74
SMG5-203ENST00000473643 CLK2P49760 499 aaKnown RBP10.42□□□□□ -0.74
SMG5-203ENST00000473643 SAFBQ15424 915 aaKnown RBP eCLIP10.42□□□□□ -0.74
SMG5-203ENST00000473643 HABP4Q5JVS0 413 aaKnown RBP10.42□□□□□ -0.74
SMG5-203ENST00000473643 MCTP2Q6DN12 878 aa10.42□□□□□ -0.74
SMG5-203ENST00000473643 BLIDQ8IZY5 108 aa10.42□□□□□ -0.74
SMG5-203ENST00000473643 ANKRD35Q8N283 1001 aa10.42□□□□□ -0.74
SMG5-203ENST00000473643 ARRDC4Q8NCT1 418 aa10.42□□□□□ -0.74
SMG5-203ENST00000473643 BICD2Q8TD16 824 aa10.42□□□□□ -0.74
SMG5-203ENST00000473643 CUL5Q93034 780 aa10.42□□□□□ -0.74
SMG5-203ENST00000473643 FGD4Q96M96 766 aa10.42□□□□□ -0.74
SMG5-203ENST00000473643 TRERF1Q96PN7 1200 aa10.42□□□□□ -0.74
SMG5-203ENST00000473643 FOXP1Q9H334 677 aaPredicted RBP10.42□□□□□ -0.74
SMG5-203ENST00000473643 ACAD9Q9H845 621 aa10.42□□□□□ -0.74
SMG5-203ENST00000473643 RNF146Q9NTX7 359 aa10.42□□□□□ -0.74
SMG5-203ENST00000473643 COLQQ9Y215 455 aaPredicted RBP10.42□□□□□ -0.74
SMG5-203ENST00000473643 ZDHHC9Q9Y397 364 aa10.42□□□□□ -0.74
SMG5-203ENST00000473643 PARP14Q460N5 1801 aa10.42□□□□□ -0.74
SMG5-203ENST00000473643 BAZ2BQ9UIF8 2168 aaKnown RBP10.41□□□□□ -0.74
SMG5-203ENST00000473643 BTBD18B2RXH4 712 aa10.41□□□□□ -0.74
SMG5-203ENST00000473643 GCOM1H8Y6P7 765 aaPredicted RBP10.41□□□□□ -0.74
SMG5-203ENST00000473643 POLR2MP0CAP2 368 aa10.41□□□□□ -0.74
SMG5-203ENST00000473643 ZSCAN22P10073 491 aaPredicted RBP10.41□□□□□ -0.74
SMG5-203ENST00000473643 KRT2P35908 639 aa10.41□□□□□ -0.74
SMG5-203ENST00000473643 HSD17B4P51659 736 aa10.41□□□□□ -0.74
SMG5-203ENST00000473643 ADCY7P51828 1080 aa10.41□□□□□ -0.74
SMG5-203ENST00000473643 GUCY1B3Q02153 619 aa10.41□□□□□ -0.74
SMG5-203ENST00000473643 PKP1Q13835 747 aa10.41□□□□□ -0.74
SMG5-203ENST00000473643 MUM1L1Q5H9M0 696 aa10.41□□□□□ -0.74
SMG5-203ENST00000473643 DIS3L2Q8IYB7 885 aaKnown RBP10.41□□□□□ -0.74
SMG5-203ENST00000473643 FAM133AQ8N9E0 248 aa10.41□□□□□ -0.74
SMG5-203ENST00000473643 TBC1D5Q92609 795 aa10.41□□□□□ -0.74
SMG5-203ENST00000473643 TNFRSF25Q93038 417 aa10.41□□□□□ -0.74
SMG5-203ENST00000473643 PRO3102Q9H379 93 aa10.41□□□□□ -0.74
SMG5-203ENST00000473643 BRMS1Q9HCU9 246 aa10.41□□□□□ -0.74
SMG5-203ENST00000473643 CHMP5Q9NZZ3 219 aa10.41□□□□□ -0.74
SMG5-203ENST00000473643 TRIOBPQ9H2D6 2365 aa10.4□□□□□ -0.74
SMG5-203ENST00000473643 VPS37CA5D8V6 355 aaPredicted RBP10.4□□□□□ -0.74
SMG5-203ENST00000473643 POTEB2H3BUK9 544 aa10.4□□□□□ -0.74
SMG5-203ENST00000473643 NFIBO00712 420 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms