RNA–Protein interactions for RNA: ENST00000473522.1

RPUSD3-214, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-214ENST00000473522 PDCD2LQ9BRP1 358 aa20.4■□□□□ 0.86
RPUSD3-214ENST00000473522 C11orf49Q9H6J7 331 aa20.4■□□□□ 0.86
RPUSD3-214ENST00000473522 PSTPIP2Q9H939 334 aa20.4■□□□□ 0.86
RPUSD3-214ENST00000473522 RBBP6Q7Z6E9 1792 aaKnown RBP20.39■□□□□ 0.86
RPUSD3-214ENST00000473522 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.39■□□□□ 0.85
RPUSD3-214ENST00000473522 EIF3JO75822 258 aaKnown RBP20.39■□□□□ 0.85
RPUSD3-214ENST00000473522 SMPD1P17405 629 aa20.39■□□□□ 0.85
RPUSD3-214ENST00000473522 STXBP2Q15833 593 aa20.39■□□□□ 0.85
RPUSD3-214ENST00000473522 GJC2Q5T442 439 aaPredicted RBP20.39■□□□□ 0.85
RPUSD3-214ENST00000473522 CCSAPQ6IQ19 270 aaPredicted RBP20.39■□□□□ 0.85
RPUSD3-214ENST00000473522 RNF180Q86T96 592 aa20.39■□□□□ 0.85
RPUSD3-214ENST00000473522 FBXO16Q8IX29 292 aaPredicted RBP20.39■□□□□ 0.85
RPUSD3-214ENST00000473522 LARP6Q9BRS8 491 aaKnown RBP20.39■□□□□ 0.85
RPUSD3-214ENST00000473522 TSEN34Q9BSV6 310 aaKnown RBP20.39■□□□□ 0.85
RPUSD3-214ENST00000473522 HTATIP2Q9BUP3 242 aa20.39■□□□□ 0.85
RPUSD3-214ENST00000473522 UPF3AQ9H1J1 476 aaKnown RBP20.39■□□□□ 0.85
RPUSD3-214ENST00000473522 BARHL2Q9NY43 387 aa20.39■□□□□ 0.85
RPUSD3-214ENST00000473522 RBM27Q9P2N5 1060 aaKnown RBP20.39■□□□□ 0.85
RPUSD3-214ENST00000473522 PGK1P00558 417 aa20.38■□□□□ 0.85
RPUSD3-214ENST00000473522 CST5P28325 142 aaPredicted RBP20.38■□□□□ 0.85
RPUSD3-214ENST00000473522 RBM25P49756 843 aaKnown RBP20.38■□□□□ 0.85
RPUSD3-214ENST00000473522 CCT2P78371 535 aaKnown RBP20.38■□□□□ 0.85
RPUSD3-214ENST00000473522 PKN1Q16512 942 aa20.38■□□□□ 0.85
RPUSD3-214ENST00000473522 PFKFB3Q16875 520 aaPredicted RBP20.38■□□□□ 0.85
RPUSD3-214ENST00000473522 DUSP28Q4G0W2 176 aa20.38■□□□□ 0.85
RPUSD3-214ENST00000473522 WWC2Q6AWC2 1192 aa20.38■□□□□ 0.85
RPUSD3-214ENST00000473522 USP17L6PQ6QN14 398 aa20.38■□□□□ 0.85
RPUSD3-214ENST00000473522 KIF2CQ99661 725 aa20.38■□□□□ 0.85
RPUSD3-214ENST00000473522 TPCN1Q9ULQ1 816 aa20.38■□□□□ 0.85
RPUSD3-214ENST00000473522 CTAGE5O15320 804 aa20.37■□□□□ 0.85
RPUSD3-214ENST00000473522 EIF2AK2P19525 551 aaKnown RBP20.37■□□□□ 0.85
RPUSD3-214ENST00000473522 NEK4P51957 841 aa20.37■□□□□ 0.85
RPUSD3-214ENST00000473522 AK2P54819 239 aa20.37■□□□□ 0.85
RPUSD3-214ENST00000473522 TMEM63BQ5T3F8 832 aa20.37■□□□□ 0.85
RPUSD3-214ENST00000473522 TYW1BQ6NUM6 668 aa20.37■□□□□ 0.85
RPUSD3-214ENST00000473522 PPP1R18Q6NYC8 613 aa20.37■□□□□ 0.85
RPUSD3-214ENST00000473522 HEATR3Q7Z4Q2 680 aa20.37■□□□□ 0.85
RPUSD3-214ENST00000473522 SCFD2Q8WU76 684 aa20.37■□□□□ 0.85
RPUSD3-214ENST00000473522 LENG1Q96BZ8 264 aaPredicted RBP20.37■□□□□ 0.85
RPUSD3-214ENST00000473522 RNF26Q9BY78 433 aaPredicted RBP20.37■□□□□ 0.85
RPUSD3-214ENST00000473522 WDR11Q9BZH6 1224 aa20.37■□□□□ 0.85
RPUSD3-214ENST00000473522 NCOA5Q9HCD5 579 aaKnown RBP20.37■□□□□ 0.85
RPUSD3-214ENST00000473522 FRMPD4Q14CM0 1322 aa20.36■□□□□ 0.85
RPUSD3-214ENST00000473522 SYNRGQ9UMZ2 1314 aa20.36■□□□□ 0.85
RPUSD3-214ENST00000473522 ZNFX1Q9P2E3 1918 aaKnown RBP20.36■□□□□ 0.85
RPUSD3-214ENST00000473522 STXBP3O00186 592 aa20.36■□□□□ 0.85
RPUSD3-214ENST00000473522 PFKFB2O60825 505 aa20.36■□□□□ 0.85
RPUSD3-214ENST00000473522 SCG2P13521 617 aa20.36■□□□□ 0.85
RPUSD3-214ENST00000473522 PGM5Q15124 567 aa20.36■□□□□ 0.85
RPUSD3-214ENST00000473522 CCDC62Q6P9F0 684 aa20.36■□□□□ 0.85
RPUSD3-214ENST00000473522 FCHSD1Q86WN1 690 aa20.36■□□□□ 0.85
RPUSD3-214ENST00000473522 GPKOWQ92917 476 aaPredicted RBP eCLIP20.36■□□□□ 0.85
RPUSD3-214ENST00000473522 CUL5Q93034 780 aa20.36■□□□□ 0.85
RPUSD3-214ENST00000473522 C22orf23Q9BZE7 217 aa20.36■□□□□ 0.85
RPUSD3-214ENST00000473522 SPC25Q9HBM1 224 aa20.36■□□□□ 0.85
RPUSD3-214ENST00000473522 PHF24Q9UPV7 400 aa20.36■□□□□ 0.85
RPUSD3-214ENST00000473522 SMCHD1A6NHR9 2005 aa20.36■□□□□ 0.85
RPUSD3-214ENST00000473522 KBTBD13C9JR72 458 aa20.35■□□□□ 0.85
RPUSD3-214ENST00000473522 NKRFO15226 690 aaKnown RBP eCLIP20.35■□□□□ 0.85
RPUSD3-214ENST00000473522 DYNC1LI2O43237 492 aaPredicted RBP20.35■□□□□ 0.85
RPUSD3-214ENST00000473522 SMARCC2Q8TAQ2 1214 aa20.35■□□□□ 0.85
RPUSD3-214ENST00000473522 PHKBQ93100 1093 aa20.35■□□□□ 0.85
RPUSD3-214ENST00000473522 SENP6Q9GZR1 1112 aaPredicted RBP20.35■□□□□ 0.85
RPUSD3-214ENST00000473522 GLT8D2Q9H1C3 349 aa20.35■□□□□ 0.85
RPUSD3-214ENST00000473522 RIC8AQ9NPQ8 531 aa20.35■□□□□ 0.85
RPUSD3-214ENST00000473522 MOXD2PA6NHM9 499 aa20.34■□□□□ 0.85
RPUSD3-214ENST00000473522 RGS20O76081 388 aa20.34■□□□□ 0.85
RPUSD3-214ENST00000473522 KCNA10Q16322 511 aa20.34■□□□□ 0.85
RPUSD3-214ENST00000473522 XRRA1Q6P2D8 792 aa20.34■□□□□ 0.85
RPUSD3-214ENST00000473522 NOL8Q76FK4 1167 aaKnown RBP20.34■□□□□ 0.85
RPUSD3-214ENST00000473522 PCSK9Q8NBP7 692 aaKnown RBP20.34■□□□□ 0.85
RPUSD3-214ENST00000473522 MYADML2A6NDP7 307 aa20.33■□□□□ 0.85
RPUSD3-214ENST00000473522 SMCO2A6NFE2 343 aa20.33■□□□□ 0.85
RPUSD3-214ENST00000473522 STAM2O75886 525 aa20.33■□□□□ 0.85
RPUSD3-214ENST00000473522 C6orf222P0C671 652 aaPredicted RBP20.33■□□□□ 0.85
RPUSD3-214ENST00000473522 TXNP10599 105 aaKnown RBP20.33■□□□□ 0.85
RPUSD3-214ENST00000473522 NAPAP54920 295 aa20.33■□□□□ 0.85
RPUSD3-214ENST00000473522 IRX5P78411 483 aaPredicted RBP20.33■□□□□ 0.85
RPUSD3-214ENST00000473522 SCRN1Q12765 414 aa20.33■□□□□ 0.85
RPUSD3-214ENST00000473522 TTLL4Q14679 1199 aa20.33■□□□□ 0.85
RPUSD3-214ENST00000473522 GNASQ5JWF2 1037 aa20.33■□□□□ 0.85
RPUSD3-214ENST00000473522 C1orf53Q5VUE5 145 aa20.33■□□□□ 0.85
RPUSD3-214ENST00000473522 TLK2Q86UE8 772 aa20.33■□□□□ 0.85
RPUSD3-214ENST00000473522 IL31RAQ8NI17 732 aa20.33■□□□□ 0.85
RPUSD3-214ENST00000473522 DPF3Q92784 378 aa20.33■□□□□ 0.85
RPUSD3-214ENST00000473522 ZMYND12Q9H0C1 365 aa20.33■□□□□ 0.85
RPUSD3-214ENST00000473522 AP5M1Q9H0R1 490 aa20.33■□□□□ 0.85
RPUSD3-214ENST00000473522 SLKQ9H2G2 1235 aaPredicted RBP20.33■□□□□ 0.85
RPUSD3-214ENST00000473522 TNRC18O15417 2968 aaPredicted RBP20.33■□□□□ 0.84
RPUSD3-214ENST00000473522 ESYT2A0FGR8 921 aa20.32■□□□□ 0.84
RPUSD3-214ENST00000473522 CPLX1O14810 134 aa20.32■□□□□ 0.84
RPUSD3-214ENST00000473522 ARIH2O95376 493 aa20.32■□□□□ 0.84
RPUSD3-214ENST00000473522 TGFB3P10600 412 aa20.32■□□□□ 0.84
RPUSD3-214ENST00000473522 CCND2P30279 289 aa20.32■□□□□ 0.84
RPUSD3-214ENST00000473522 ACLYP53396 1101 aa20.32■□□□□ 0.84
RPUSD3-214ENST00000473522 MRPS9P82933 396 aaKnown RBP20.32■□□□□ 0.84
RPUSD3-214ENST00000473522 AKAP17AQ02040 695 aaKnown RBP20.32■□□□□ 0.84
RPUSD3-214ENST00000473522 STK3Q13188 491 aa20.32■□□□□ 0.84
RPUSD3-214ENST00000473522 KCNV1Q6PIU1 500 aa20.32■□□□□ 0.84
RPUSD3-214ENST00000473522 CPLX2Q6PUV4 134 aaKnown RBP20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms