RNA–Protein interactions for RNA: ENST00000473420.5

CTDSP1-207, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-207ENST00000473420 CYP2C19P33261 490 aa21.79■■□□□ 1.08
CTDSP1-207ENST00000473420 CACNB2Q08289 660 aaPredicted RBP21.79■■□□□ 1.08
CTDSP1-207ENST00000473420 CUL4AQ13619 759 aa21.79■■□□□ 1.08
CTDSP1-207ENST00000473420 MCTP2Q6DN12 878 aa21.79■■□□□ 1.08
CTDSP1-207ENST00000473420 BICD2Q8TD16 824 aa21.79■■□□□ 1.08
CTDSP1-207ENST00000473420 SHISA4Q96DD7 197 aa21.79■■□□□ 1.08
CTDSP1-207ENST00000473420 AIFM3Q96NN9 605 aa21.79■■□□□ 1.08
CTDSP1-207ENST00000473420 ALG1Q9BT22 464 aa21.79■■□□□ 1.08
CTDSP1-207ENST00000473420 PXMP2Q9NR77 195 aa21.79■■□□□ 1.08
CTDSP1-207ENST00000473420 KIAA1217Q5T5P2 1943 aa21.78■■□□□ 1.08
CTDSP1-207ENST00000473420 FOSP01100 380 aaPredicted RBP21.78■■□□□ 1.08
CTDSP1-207ENST00000473420 CYBAP13498 195 aa21.78■■□□□ 1.08
CTDSP1-207ENST00000473420 PRKAR2AP13861 404 aaKnown RBP21.78■■□□□ 1.08
CTDSP1-207ENST00000473420 CLK2P49760 499 aaKnown RBP21.78■■□□□ 1.08
CTDSP1-207ENST00000473420 TRIM32Q13049 653 aa21.78■■□□□ 1.08
CTDSP1-207ENST00000473420 AP3B2Q13367 1082 aa21.78■■□□□ 1.08
CTDSP1-207ENST00000473420 ARHGEF16Q5VV41 709 aa21.78■■□□□ 1.08
CTDSP1-207ENST00000473420 GALNT17Q6IS24 598 aa21.78■■□□□ 1.08
CTDSP1-207ENST00000473420 FCHSD1Q86WN1 690 aa21.78■■□□□ 1.08
CTDSP1-207ENST00000473420 ABHD16BQ9H3Z7 469 aa21.78■■□□□ 1.08
CTDSP1-207ENST00000473420 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.78■■□□□ 1.08
CTDSP1-207ENST00000473420 CNPY2Q9Y2B0 182 aa21.78■■□□□ 1.08
CTDSP1-207ENST00000473420 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.78■■□□□ 1.08
CTDSP1-207ENST00000473420 RPTORQ8N122 1335 aa21.78■■□□□ 1.08
CTDSP1-207ENST00000473420 SNAI1O95863 264 aaPredicted RBP21.77■■□□□ 1.08
CTDSP1-207ENST00000473420 NLRP5P59047 1200 aa21.77■■□□□ 1.08
CTDSP1-207ENST00000473420 UBE2SQ16763 222 aa21.77■■□□□ 1.08
CTDSP1-207ENST00000473420 TNS4Q8IZW8 715 aa21.77■■□□□ 1.08
CTDSP1-207ENST00000473420 DAGLBQ8NCG7 672 aa21.77■■□□□ 1.08
CTDSP1-207ENST00000473420 PDCD2LQ9BRP1 358 aa21.77■■□□□ 1.08
CTDSP1-207ENST00000473420 PHF20Q9BVI0 1012 aa21.77■■□□□ 1.08
CTDSP1-207ENST00000473420 EHMT1Q9H9B1 1298 aa21.77■■□□□ 1.08
CTDSP1-207ENST00000473420 FRMPD3Q5JV73 1810 aa21.77■■□□□ 1.08
CTDSP1-207ENST00000473420 SPDYE3A6NKU9 549 aa21.76■■□□□ 1.07
CTDSP1-207ENST00000473420 PDE4DQ08499 809 aa21.76■■□□□ 1.07
CTDSP1-207ENST00000473420 PGM5Q15124 567 aa21.76■■□□□ 1.07
CTDSP1-207ENST00000473420 HSCBQ8IWL3 235 aa21.76■■□□□ 1.07
CTDSP1-207ENST00000473420 REXO1Q8N1G1 1221 aaKnown RBP21.76■■□□□ 1.07
CTDSP1-207ENST00000473420 HMX1Q9NP08 348 aaPredicted RBP21.76■■□□□ 1.07
CTDSP1-207ENST00000473420 PCDHA4Q9UN74 947 aa21.76■■□□□ 1.07
CTDSP1-207ENST00000473420 KIF3AQ9Y496 699 aa21.76■■□□□ 1.07
CTDSP1-207ENST00000473420 DTNBO60941 627 aa21.75■■□□□ 1.07
CTDSP1-207ENST00000473420 EIF2AK2P19525 551 aaKnown RBP21.75■■□□□ 1.07
CTDSP1-207ENST00000473420 FAM184AQ8NB25 1140 aa21.75■■□□□ 1.07
CTDSP1-207ENST00000473420 KATNBL1Q9H079 304 aa21.75■■□□□ 1.07
CTDSP1-207ENST00000473420 VTA1Q9NP79 307 aa21.75■■□□□ 1.07
CTDSP1-207ENST00000473420 PCDHA6Q9UN73 950 aa21.75■■□□□ 1.07
CTDSP1-207ENST00000473420 PCDHA8Q9Y5H6 950 aa21.75■■□□□ 1.07
CTDSP1-207ENST00000473420 NR3C2P08235 984 aa21.74■■□□□ 1.07
CTDSP1-207ENST00000473420 ZNF865P0CJ78 1059 aaPredicted RBP21.74■■□□□ 1.07
CTDSP1-207ENST00000473420 CCL5P13501 91 aa21.74■■□□□ 1.07
CTDSP1-207ENST00000473420 ACVR2BQ13705 512 aa21.74■■□□□ 1.07
CTDSP1-207ENST00000473420 TRIM29Q14134 588 aa21.74■■□□□ 1.07
CTDSP1-207ENST00000473420 STXBP2Q15833 593 aa21.74■■□□□ 1.07
CTDSP1-207ENST00000473420 XRRA1Q6P2D8 792 aa21.74■■□□□ 1.07
CTDSP1-207ENST00000473420 BLIDQ8IZY5 108 aa21.74■■□□□ 1.07
CTDSP1-207ENST00000473420 TRPV1Q8NER1 839 aa21.74■■□□□ 1.07
CTDSP1-207ENST00000473420 ABHD8Q96I13 439 aa21.74■■□□□ 1.07
CTDSP1-207ENST00000473420 MYH7BA7E2Y1 1941 aa21.73■■□□□ 1.07
CTDSP1-207ENST00000473420 STAM2O75886 525 aa21.73■■□□□ 1.07
CTDSP1-207ENST00000473420 CCND2P30279 289 aa21.73■■□□□ 1.07
CTDSP1-207ENST00000473420 MTFR1Q15390 333 aa21.73■■□□□ 1.07
CTDSP1-207ENST00000473420 NPY5RQ15761 445 aa21.73■■□□□ 1.07
CTDSP1-207ENST00000473420 VSIG10LQ86VR7 867 aa21.73■■□□□ 1.07
CTDSP1-207ENST00000473420 INTS4Q96HW7 963 aaKnown RBP21.73■■□□□ 1.07
CTDSP1-207ENST00000473420 ANO3Q9BYT9 981 aa21.73■■□□□ 1.07
CTDSP1-207ENST00000473420 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.73■■□□□ 1.073e-7■■□□□ 11.8
CTDSP1-207ENST00000473420 UNC93B1Q9H1C4 597 aa21.73■■□□□ 1.07
CTDSP1-207ENST00000473420 PAK6Q9NQU5 681 aaPredicted RBP21.73■■□□□ 1.07
CTDSP1-207ENST00000473420 KCNJ14Q9UNX9 436 aa21.73■■□□□ 1.07
CTDSP1-207ENST00000473420 M0R2N6 131 aa21.72■■□□□ 1.07
CTDSP1-207ENST00000473420 SEPT4O43236 478 aa21.72■■□□□ 1.07
CTDSP1-207ENST00000473420 MSCO60682 206 aa21.72■■□□□ 1.07
CTDSP1-207ENST00000473420 EIF3JO75822 258 aaKnown RBP21.72■■□□□ 1.07
CTDSP1-207ENST00000473420 CCND3P30281 292 aaPredicted RBP21.72■■□□□ 1.07
CTDSP1-207ENST00000473420 PRAMEF19Q5SWL8 479 aa21.72■■□□□ 1.07
CTDSP1-207ENST00000473420 PCNX4Q63HM2 1172 aa21.72■■□□□ 1.07
CTDSP1-207ENST00000473420 TMEM260Q9NX78 707 aa21.72■■□□□ 1.07
CTDSP1-207ENST00000473420 ZHX1Q9UKY1 873 aaPredicted RBP21.72■■□□□ 1.07
CTDSP1-207ENST00000473420 SMC3Q9UQE7 1217 aa21.72■■□□□ 1.07
CTDSP1-207ENST00000473420 MMP1P03956 469 aa21.71■■□□□ 1.07
CTDSP1-207ENST00000473420 AKR1A1P14550 325 aa21.71■■□□□ 1.07
CTDSP1-207ENST00000473420 CAPN2P17655 700 aa21.71■■□□□ 1.07
CTDSP1-207ENST00000473420 GJB2P29033 226 aa21.71■■□□□ 1.07
CTDSP1-207ENST00000473420 JAKMIP3Q5VZ66 844 aa21.71■■□□□ 1.07
CTDSP1-207ENST00000473420 KRT40Q6A162 431 aa21.71■■□□□ 1.07
CTDSP1-207ENST00000473420 IL31RAQ8NI17 732 aa21.71■■□□□ 1.07
CTDSP1-207ENST00000473420 C8orf76Q96K31 380 aa21.71■■□□□ 1.07
CTDSP1-207ENST00000473420 RNF208Q9H0X6 261 aa21.71■■□□□ 1.07
CTDSP1-207ENST00000473420 BRMS1Q9HCU9 246 aa21.71■■□□□ 1.07
CTDSP1-207ENST00000473420 GJB4Q9NTQ9 266 aa21.71■■□□□ 1.07
CTDSP1-207ENST00000473420 DDX49Q9Y6V7 483 aaKnown RBP21.71■■□□□ 1.07
CTDSP1-207ENST00000473420 RBM47A0AV96 593 aaKnown RBP21.7■■□□□ 1.06
CTDSP1-207ENST00000473420 ADAMTS3O15072 1205 aa21.7■■□□□ 1.06
CTDSP1-207ENST00000473420 MYCLP12524 364 aaPredicted RBP21.7■■□□□ 1.06
CTDSP1-207ENST00000473420 CNGA1P29973 690 aa21.7■■□□□ 1.06
CTDSP1-207ENST00000473420 SREBF1P36956 1147 aa21.7■■□□□ 1.06
CTDSP1-207ENST00000473420 TAPT1Q6NXT6 567 aa21.7■■□□□ 1.06
CTDSP1-207ENST00000473420 FBXO16Q8IX29 292 aaPredicted RBP21.7■■□□□ 1.06
CTDSP1-207ENST00000473420 TMEM106CQ9BVX2 250 aa21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms