RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 RRP36Q96EU6 259 aaKnown RBP15.17■□□□□ 0.02
TPM3-216ENST00000473036 C22orf23Q9BZE7 217 aa15.17■□□□□ 0.02
TPM3-216ENST00000473036 PNMA2Q9UL42 364 aa15.17■□□□□ 0.02
TPM3-216ENST00000473036 V9GY48 417 aaPredicted RBP15.17■□□□□ 0.02
TPM3-216ENST00000473036 EDNRBP24530 442 aa15.16■□□□□ 0.02
TPM3-216ENST00000473036 HOXA13P31271 388 aaPredicted RBP15.16■□□□□ 0.02
TPM3-216ENST00000473036 IRX5P78411 483 aaPredicted RBP15.16■□□□□ 0.02
TPM3-216ENST00000473036 PKN1Q16512 942 aa15.16■□□□□ 0.02
TPM3-216ENST00000473036 WWC2Q6AWC2 1192 aa15.16■□□□□ 0.02
TPM3-216ENST00000473036 PHKBQ93100 1093 aa15.16■□□□□ 0.02
TPM3-216ENST00000473036 ZNF274Q96GC6 653 aaPredicted RBP15.16■□□□□ 0.02
TPM3-216ENST00000473036 PDGFCQ9NRA1 345 aa15.16■□□□□ 0.02
TPM3-216ENST00000473036 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.15■□□□□ 0.02
TPM3-216ENST00000473036 MEIS2O14770 477 aa15.15■□□□□ 0.02
TPM3-216ENST00000473036 SEPT4O43236 478 aa15.15■□□□□ 0.02
TPM3-216ENST00000473036 CFBP00751 764 aa15.15■□□□□ 0.02
TPM3-216ENST00000473036 CNGA1P29973 690 aa15.15■□□□□ 0.02
TPM3-216ENST00000473036 ST3GAL1Q11201 340 aa15.15■□□□□ 0.02
TPM3-216ENST00000473036 SCRN1Q12765 414 aa15.15■□□□□ 0.02
TPM3-216ENST00000473036 STK3Q13188 491 aa15.15■□□□□ 0.02
TPM3-216ENST00000473036 ACVR2BQ13705 512 aa15.15■□□□□ 0.02
TPM3-216ENST00000473036 TAPT1Q6NXT6 567 aa15.15■□□□□ 0.02
TPM3-216ENST00000473036 BACH2Q9BYV9 841 aa15.15■□□□□ 0.02
TPM3-216ENST00000473036 DDX20Q9UHI6 824 aaKnown RBP15.15■□□□□ 0.02
TPM3-216ENST00000473036 LAMA2P24043 3122 aaKnown RBP15.15■□□□□ 0.02
TPM3-216ENST00000473036 MSCO60682 206 aa15.14■□□□□ 0.01
TPM3-216ENST00000473036 CTDNEP1O95476 244 aa15.14■□□□□ 0.01
TPM3-216ENST00000473036 SYN1P17600 705 aa15.14■□□□□ 0.01
TPM3-216ENST00000473036 NEK4P51957 841 aa15.14■□□□□ 0.01
TPM3-216ENST00000473036 ME3Q16798 604 aa15.14■□□□□ 0.01
TPM3-216ENST00000473036 USP17L6PQ6QN14 398 aa15.14■□□□□ 0.01
TPM3-216ENST00000473036 EEPD1Q7L9B9 569 aa15.14■□□□□ 0.01
TPM3-216ENST00000473036 FBXO16Q8IX29 292 aaPredicted RBP15.14■□□□□ 0.01
TPM3-216ENST00000473036 IL27Q8NEV9 243 aa15.14■□□□□ 0.01
TPM3-216ENST00000473036 IL31RAQ8NI17 732 aa15.14■□□□□ 0.01
TPM3-216ENST00000473036 NRBP1Q9UHY1 535 aa15.14■□□□□ 0.01
TPM3-216ENST00000473036 ZHX1Q9UKY1 873 aaPredicted RBP15.14■□□□□ 0.01
TPM3-216ENST00000473036 KIAA1217Q5T5P2 1943 aa15.13■□□□□ 0.01
TPM3-216ENST00000473036 STXBP3O00186 592 aa15.13■□□□□ 0.01
TPM3-216ENST00000473036 PFKFB2O60825 505 aa15.13■□□□□ 0.01
TPM3-216ENST00000473036 IFNAR1P17181 557 aa15.13■□□□□ 0.01
TPM3-216ENST00000473036 PPP2R5BQ15173 497 aa15.13■□□□□ 0.01
TPM3-216ENST00000473036 CCDC144BQ3MJ40 725 aa15.13■□□□□ 0.01
TPM3-216ENST00000473036 NOL8Q76FK4 1167 aaKnown RBP15.13■□□□□ 0.01
TPM3-216ENST00000473036 Q7L0L9 218 aa15.13■□□□□ 0.01
TPM3-216ENST00000473036 MCF2L2Q86YR7 1114 aa15.13■□□□□ 0.01
TPM3-216ENST00000473036 DNERQ8NFT8 737 aa15.13■□□□□ 0.01
TPM3-216ENST00000473036 MAF1Q9H063 256 aa15.13■□□□□ 0.01
TPM3-216ENST00000473036 ABHD16BQ9H3Z7 469 aa15.13■□□□□ 0.01
TPM3-216ENST00000473036 PXMP2Q9NR77 195 aa15.13■□□□□ 0.01
TPM3-216ENST00000473036 SEC63Q9UGP8 760 aaKnown RBP15.13■□□□□ 0.01
TPM3-216ENST00000473036 MYADML2A6NDP7 307 aa15.12■□□□□ 0.01
TPM3-216ENST00000473036 ASB14A6NK59 587 aa15.12■□□□□ 0.01
TPM3-216ENST00000473036 CTAGE5O15320 804 aa15.12■□□□□ 0.01
TPM3-216ENST00000473036 PRPF3O43395 683 aaKnown RBP15.12■□□□□ 0.01
TPM3-216ENST00000473036 EIF2AK2P19525 551 aaKnown RBP15.12■□□□□ 0.01
TPM3-216ENST00000473036 ADCYAP1R1P41586 468 aa15.12■□□□□ 0.01
TPM3-216ENST00000473036 UBE2SQ16763 222 aa15.12■□□□□ 0.01
TPM3-216ENST00000473036 PFKFB3Q16875 520 aaPredicted RBP15.12■□□□□ 0.01
TPM3-216ENST00000473036 GJC2Q5T442 439 aaPredicted RBP15.12■□□□□ 0.01
TPM3-216ENST00000473036 HEATR3Q7Z4Q2 680 aa15.12■□□□□ 0.01
TPM3-216ENST00000473036 NECAB1Q8N987 351 aa15.12■□□□□ 0.01
TPM3-216ENST00000473036 ZFP91Q96JP5 570 aaPredicted RBP15.12■□□□□ 0.01
TPM3-216ENST00000473036 RMDN3Q96TC7 470 aa15.12■□□□□ 0.01
TPM3-216ENST00000473036 LBHD1Q9BQE6 289 aaPredicted RBP15.12■□□□□ 0.01
TPM3-216ENST00000473036 ADD3Q9UEY8 706 aaKnown RBP15.12■□□□□ 0.01
TPM3-216ENST00000473036 CNPY2Q9Y2B0 182 aa15.12■□□□□ 0.01
TPM3-216ENST00000473036 CCDC196A0A1B0GTZ2 297 aa15.11■□□□□ 0.01
TPM3-216ENST00000473036 RBM47A0AV96 593 aaKnown RBP15.11■□□□□ 0.01
TPM3-216ENST00000473036 GCOM1H8Y6P7 765 aaPredicted RBP15.11■□□□□ 0.01
TPM3-216ENST00000473036 PIK3CDO00329 1044 aa15.11■□□□□ 0.01
TPM3-216ENST00000473036 ADAMTS4O75173 837 aa15.11■□□□□ 0.01
TPM3-216ENST00000473036 RGS20O76081 388 aa15.11■□□□□ 0.01
TPM3-216ENST00000473036 POLR2MP0CAP2 368 aa15.11■□□□□ 0.01
TPM3-216ENST00000473036 FCHSD1Q86WN1 690 aa15.11■□□□□ 0.01
TPM3-216ENST00000473036 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.11■□□□□ 0.01
TPM3-216ENST00000473036 TBC1D32Q96NH3 1257 aa15.11■□□□□ 0.01
TPM3-216ENST00000473036 AIFM3Q96NN9 605 aa15.11■□□□□ 0.01
TPM3-216ENST00000473036 SLC26A6Q9BXS9 759 aa15.11■□□□□ 0.01
TPM3-216ENST00000473036 BARHL2Q9NY43 387 aa15.11■□□□□ 0.01
TPM3-216ENST00000473036 GNEQ9Y223 722 aaKnown RBP15.11■□□□□ 0.01
TPM3-216ENST00000473036 FRMPD4Q14CM0 1322 aa15.11■□□□□ 0.01
TPM3-216ENST00000473036 LOC102724159A0A0B4J2E5 919 aa15.1■□□□□ 0.01
TPM3-216ENST00000473036 ARIH2O95376 493 aa15.1■□□□□ 0.01
TPM3-216ENST00000473036 CD2BP2O95400 341 aaKnown RBP15.1■□□□□ 0.01
TPM3-216ENST00000473036 PGK1P00558 417 aa15.1■□□□□ 0.01
TPM3-216ENST00000473036 SCG2P13521 617 aa15.1■□□□□ 0.01
TPM3-216ENST00000473036 AKR1A1P14550 325 aa15.1■□□□□ 0.01
TPM3-216ENST00000473036 SMPD1P17405 629 aa15.1■□□□□ 0.01
TPM3-216ENST00000473036 PWP2Q15269 919 aaKnown RBP15.1■□□□□ 0.01
TPM3-216ENST00000473036 LRRC26Q2I0M4 334 aa15.1■□□□□ 0.01
TPM3-216ENST00000473036 NSUN6Q8TEA1 469 aaKnown RBP15.1■□□□□ 0.01
TPM3-216ENST00000473036 PDCD2LQ9BRP1 358 aa15.1■□□□□ 0.01
TPM3-216ENST00000473036 RNF26Q9BY78 433 aaPredicted RBP15.1■□□□□ 0.01
TPM3-216ENST00000473036 MAP3K20Q9NYL2 800 aaKnown RBP15.1■□□□□ 0.01
TPM3-216ENST00000473036 SYNRGQ9UMZ2 1314 aa15.1■□□□□ 0.01
TPM3-216ENST00000473036 NR3C2P08235 984 aa15.09■□□□□ 0.01
TPM3-216ENST00000473036 MRPS9P82933 396 aaKnown RBP15.09■□□□□ 0.01
TPM3-216ENST00000473036 TRAF1Q13077 416 aa15.09■□□□□ 0.01
TPM3-216ENST00000473036 PGM5Q15124 567 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms