RNA–Protein interactions for RNA: ENST00000472928.5

HDAC1-205, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-205ENST00000472928 XPNPEP3Q9NQH7 507 aa7.49□□□□□ -1.21
HDAC1-205ENST00000472928 CXXC1Q9P0U4 656 aaPredicted RBP7.49□□□□□ -1.21
HDAC1-205ENST00000472928 NRBP1Q9UHY1 535 aa7.49□□□□□ -1.21
HDAC1-205ENST00000472928 FKBPLQ9UIM3 349 aa7.49□□□□□ -1.21
HDAC1-205ENST00000472928 TAF6LQ9Y6J9 622 aa7.49□□□□□ -1.21
HDAC1-205ENST00000472928 ZDBF2Q9HCK1 2354 aa7.49□□□□□ -1.21
HDAC1-205ENST00000472928 A0A0G2JMZ2 1700 aa7.49□□□□□ -1.21
HDAC1-205ENST00000472928 ZMYM6O95789 1325 aa7.49□□□□□ -1.21
HDAC1-205ENST00000472928 MYH4Q9Y623 1939 aa7.48□□□□□ -1.21
HDAC1-205ENST00000472928 CACNA1AO00555 2505 aa7.48□□□□□ -1.21
HDAC1-205ENST00000472928 BAG3O95817 575 aa7.48□□□□□ -1.21
HDAC1-205ENST00000472928 APPP05067 770 aa7.48□□□□□ -1.21
HDAC1-205ENST00000472928 HLA-DOAP06340 250 aa7.48□□□□□ -1.21
HDAC1-205ENST00000472928 FBXO45P0C2W1 286 aa7.48□□□□□ -1.21
HDAC1-205ENST00000472928 RARBP10826 455 aa7.48□□□□□ -1.21
HDAC1-205ENST00000472928 TAL1P17542 331 aaPredicted RBP7.48□□□□□ -1.21
HDAC1-205ENST00000472928 GNAT2P19087 354 aa7.48□□□□□ -1.21
HDAC1-205ENST00000472928 SHMT1P34896 483 aa7.48□□□□□ -1.21
HDAC1-205ENST00000472928 TDO2P48775 406 aa7.48□□□□□ -1.21
HDAC1-205ENST00000472928 DYNLL1P63167 89 aaKnown RBP7.48□□□□□ -1.21
HDAC1-205ENST00000472928 TFF2Q03403 129 aa7.48□□□□□ -1.21
HDAC1-205ENST00000472928 KRT32Q14532 448 aa7.48□□□□□ -1.21
HDAC1-205ENST00000472928 RAB3GAP1Q15042 981 aa7.48□□□□□ -1.21
HDAC1-205ENST00000472928 NECTIN1Q15223 517 aa7.48□□□□□ -1.21
HDAC1-205ENST00000472928 KIAA1755Q5JYT7 1200 aa7.48□□□□□ -1.21
HDAC1-205ENST00000472928 MFSD5Q6N075 450 aa7.48□□□□□ -1.21
HDAC1-205ENST00000472928 ABRAQ8N0Z2 381 aa7.48□□□□□ -1.21
HDAC1-205ENST00000472928 SLC44A5Q8NCS7 719 aa7.48□□□□□ -1.21
HDAC1-205ENST00000472928 SNX21Q969T3 373 aa7.48□□□□□ -1.21
HDAC1-205ENST00000472928 PBXIP1Q96AQ6 731 aa7.48□□□□□ -1.21
HDAC1-205ENST00000472928 STRBPQ96SI9 672 aaKnown RBP7.48□□□□□ -1.21
HDAC1-205ENST00000472928 SPSB2Q99619 263 aa7.48□□□□□ -1.21
HDAC1-205ENST00000472928 NOL10Q9BSC4 688 aaKnown RBP7.48□□□□□ -1.21
HDAC1-205ENST00000472928 CTNNA3Q9UI47 895 aa7.48□□□□□ -1.21
HDAC1-205ENST00000472928 YBX2Q9Y2T7 364 aaKnown RBP7.48□□□□□ -1.21
HDAC1-205ENST00000472928 SLC4A4Q9Y6R1 1079 aa7.48□□□□□ -1.21
HDAC1-205ENST00000472928 CACNA1HO95180 2353 aa7.48□□□□□ -1.21
HDAC1-205ENST00000472928 MYH15Q9Y2K3 1946 aa7.48□□□□□ -1.21
HDAC1-205ENST00000472928 A0A1W2PRG0 241 aa7.47□□□□□ -1.21
HDAC1-205ENST00000472928 PALM3A6NDB9 673 aaPredicted RBP7.47□□□□□ -1.21
HDAC1-205ENST00000472928 K7ELQ4 463 aaPredicted RBP7.47□□□□□ -1.21
HDAC1-205ENST00000472928 CYP21A2P08686 494 aa7.47□□□□□ -1.21
HDAC1-205ENST00000472928 CCNYL3P0C7X3 344 aa7.47□□□□□ -1.21
HDAC1-205ENST00000472928 ZNF865P0CJ78 1059 aaPredicted RBP7.47□□□□□ -1.21
HDAC1-205ENST00000472928 ACRP10323 421 aa7.47□□□□□ -1.21
HDAC1-205ENST00000472928 CPA1P15085 419 aa7.47□□□□□ -1.21
HDAC1-205ENST00000472928 CSF2RAP15509 400 aa7.47□□□□□ -1.21
HDAC1-205ENST00000472928 IGFBP4P22692 258 aa7.47□□□□□ -1.21
HDAC1-205ENST00000472928 MMP16P51512 607 aa7.47□□□□□ -1.21
HDAC1-205ENST00000472928 KCNQ1P51787 676 aa7.47□□□□□ -1.21
HDAC1-205ENST00000472928 NEK4P51957 841 aa7.47□□□□□ -1.21
HDAC1-205ENST00000472928 COPS2P61201 443 aa7.47□□□□□ -1.21
HDAC1-205ENST00000472928 HAND2P61296 217 aa7.47□□□□□ -1.21
HDAC1-205ENST00000472928 SEMA3FQ13275 785 aa7.47□□□□□ -1.21
HDAC1-205ENST00000472928 PPIGQ13427 754 aaKnown RBP eCLIP7.47□□□□□ -1.216e-8■■■□□ 17.4
HDAC1-205ENST00000472928 COG2Q14746 738 aa7.47□□□□□ -1.21
HDAC1-205ENST00000472928 IMMTQ16891 758 aaKnown RBP7.47□□□□□ -1.21
HDAC1-205ENST00000472928 ABCB5Q2M3G0 1257 aa7.47□□□□□ -1.21
HDAC1-205ENST00000472928 ADCK5Q3MIX3 580 aa7.47□□□□□ -1.21
HDAC1-205ENST00000472928 CCSAPQ6IQ19 270 aaPredicted RBP7.47□□□□□ -1.21
HDAC1-205ENST00000472928 TMED8Q6PL24 325 aaPredicted RBP7.47□□□□□ -1.21
HDAC1-205ENST00000472928 STOX1Q6ZVD7 989 aa7.47□□□□□ -1.21
HDAC1-205ENST00000472928 ZNF365Q70YC5 407 aa7.47□□□□□ -1.21
HDAC1-205ENST00000472928 NOL8Q76FK4 1167 aaKnown RBP7.47□□□□□ -1.21
HDAC1-205ENST00000472928 RNF180Q86T96 592 aa7.47□□□□□ -1.21
HDAC1-205ENST00000472928 KLHDC9Q8NEP7 349 aa7.47□□□□□ -1.21
HDAC1-205ENST00000472928 RIOK1Q9BRS2 568 aaKnown RBP7.47□□□□□ -1.21
HDAC1-205ENST00000472928 CRNKL1Q9BZJ0 848 aaKnown RBP7.47□□□□□ -1.21
HDAC1-205ENST00000472928 NACAP1Q9BZK3 213 aa7.47□□□□□ -1.21
HDAC1-205ENST00000472928 NAPBQ9H115 298 aa7.47□□□□□ -1.21
HDAC1-205ENST00000472928 EHD4Q9H223 541 aa7.47□□□□□ -1.21
HDAC1-205ENST00000472928 NKX2-4Q9H2Z4 354 aa7.47□□□□□ -1.21
HDAC1-205ENST00000472928 MROH8Q9H579 483 aa7.47□□□□□ -1.21
HDAC1-205ENST00000472928 C11orf16Q9NQ32 467 aa7.47□□□□□ -1.21
HDAC1-205ENST00000472928 SLC5A4Q9NY91 659 aa7.47□□□□□ -1.21
HDAC1-205ENST00000472928 SERPINB13Q9UIV8 391 aa7.47□□□□□ -1.21
HDAC1-205ENST00000472928 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.46□□□□□ -1.22
HDAC1-205ENST00000472928 MYADML2A6NDP7 307 aa7.46□□□□□ -1.22
HDAC1-205ENST00000472928 ZBBXA8MT70 800 aa7.46□□□□□ -1.22
HDAC1-205ENST00000472928 GSG1L2A8MUP6 293 aa7.46□□□□□ -1.22
HDAC1-205ENST00000472928 DCDC2CA8MYV0 355 aa7.46□□□□□ -1.22
HDAC1-205ENST00000472928 PRKAB2O43741 272 aa7.46□□□□□ -1.22
HDAC1-205ENST00000472928 IGSF3O75054 1194 aa7.46□□□□□ -1.22
HDAC1-205ENST00000472928 FGAP02671 866 aa7.46□□□□□ -1.22
HDAC1-205ENST00000472928 PGK2P07205 417 aa7.46□□□□□ -1.22
HDAC1-205ENST00000472928 PSMA5P28066 241 aa7.46□□□□□ -1.22
HDAC1-205ENST00000472928 CDK7P50613 346 aa7.46□□□□□ -1.22
HDAC1-205ENST00000472928 ACLYP53396 1101 aa7.46□□□□□ -1.22
HDAC1-205ENST00000472928 SEPT2Q15019 361 aa7.46□□□□□ -1.22
HDAC1-205ENST00000472928 ZNF792Q3KQV3 632 aa7.46□□□□□ -1.22
HDAC1-205ENST00000472928 CERKLQ49MI3 558 aaPredicted RBP7.46□□□□□ -1.22
HDAC1-205ENST00000472928 BLOC1S2Q6QNY1 142 aa7.46□□□□□ -1.22
HDAC1-205ENST00000472928 NCAPG2Q86XI2 1143 aa7.46□□□□□ -1.22
HDAC1-205ENST00000472928 TBC1D10CQ8IV04 446 aa7.46□□□□□ -1.22
HDAC1-205ENST00000472928 SDR42E1Q8WUS8 393 aa7.46□□□□□ -1.22
HDAC1-205ENST00000472928 ATG4CQ96DT6 458 aa7.46□□□□□ -1.22
HDAC1-205ENST00000472928 TINF2Q9BSI4 451 aa7.46□□□□□ -1.22
HDAC1-205ENST00000472928 TSEN34Q9BSV6 310 aaKnown RBP7.46□□□□□ -1.22
HDAC1-205ENST00000472928 TM6SF1Q9BZW5 370 aa7.46□□□□□ -1.22
HDAC1-205ENST00000472928 PRDM9Q9NQV7 894 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms