RNA–Protein interactions for RNA: ENST00000472725.5

SF1-213, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 632 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-213ENST00000472725 EHMT1Q9H9B1 1298 aa22.93■■□□□ 1.26
SF1-213ENST00000472725 PXMP2Q9NR77 195 aa22.93■■□□□ 1.26
SF1-213ENST00000472725 KIF3AQ9Y496 699 aa22.93■■□□□ 1.26
SF1-213ENST00000472725 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.93■■□□□ 1.26
SF1-213ENST00000472725 PPFIA3O75145 1194 aa22.92■■□□□ 1.26
SF1-213ENST00000472725 PRKAR2AP13861 404 aaKnown RBP22.92■■□□□ 1.26
SF1-213ENST00000472725 CYP2C19P33261 490 aa22.92■■□□□ 1.26
SF1-213ENST00000472725 CACNB2Q08289 660 aaPredicted RBP22.92■■□□□ 1.26
SF1-213ENST00000472725 ARHGEF16Q5VV41 709 aa22.92■■□□□ 1.26
SF1-213ENST00000472725 USP17L6PQ6QN14 398 aa22.92■■□□□ 1.26
SF1-213ENST00000472725 TNS4Q8IZW8 715 aa22.92■■□□□ 1.26
SF1-213ENST00000472725 ALG1Q9BT22 464 aa22.92■■□□□ 1.26
SF1-213ENST00000472725 HMX1Q9NP08 348 aaPredicted RBP22.92■■□□□ 1.26
SF1-213ENST00000472725 CDKN2AIPQ9NXV6 580 aaPredicted RBP22.92■■□□□ 1.26
SF1-213ENST00000472725 VPS54Q9P1Q0 977 aa22.92■■□□□ 1.26
SF1-213ENST00000472725 MCM3APO60318 1980 aa22.91■■□□□ 1.26
SF1-213ENST00000472725 SPDYE3A6NKU9 549 aa22.91■■□□□ 1.26
SF1-213ENST00000472725 K7ELQ4 463 aaPredicted RBP22.91■■□□□ 1.26
SF1-213ENST00000472725 SNAI1O95863 264 aaPredicted RBP22.91■■□□□ 1.26
SF1-213ENST00000472725 CYBAP13498 195 aa22.91■■□□□ 1.26
SF1-213ENST00000472725 CLK2P49760 499 aaKnown RBP22.91■■□□□ 1.26
SF1-213ENST00000472725 NLRP5P59047 1200 aa22.91■■□□□ 1.26
SF1-213ENST00000472725 CUL4AQ13619 759 aa22.91■■□□□ 1.26
SF1-213ENST00000472725 XRRA1Q6P2D8 792 aa22.91■■□□□ 1.26
SF1-213ENST00000472725 FCHSD1Q86WN1 690 aa22.91■■□□□ 1.26
SF1-213ENST00000472725 DAGLBQ8NCG7 672 aa22.91■■□□□ 1.26
SF1-213ENST00000472725 PURBQ96QR8 312 aaKnown RBP22.91■■□□□ 1.26
SF1-213ENST00000472725 VTA1Q9NP79 307 aa22.91■■□□□ 1.26
SF1-213ENST00000472725 JAK2O60674 1132 aa22.9■■□□□ 1.26
SF1-213ENST00000472725 MSCO60682 206 aa22.9■■□□□ 1.26
SF1-213ENST00000472725 STAM2O75886 525 aa22.9■■□□□ 1.26
SF1-213ENST00000472725 PDE4DQ08499 809 aa22.9■■□□□ 1.26
SF1-213ENST00000472725 PDCD2LQ9BRP1 358 aa22.9■■□□□ 1.26
SF1-213ENST00000472725 NR3C2P08235 984 aa22.89■■□□□ 1.25
SF1-213ENST00000472725 ACVR2BQ13705 512 aa22.89■■□□□ 1.25
SF1-213ENST00000472725 TRIM29Q14134 588 aa22.89■■□□□ 1.25
SF1-213ENST00000472725 STXBP2Q15833 593 aa22.89■■□□□ 1.25
SF1-213ENST00000472725 HSCBQ8IWL3 235 aa22.89■■□□□ 1.25
SF1-213ENST00000472725 REXO1Q8N1G1 1221 aaKnown RBP22.89■■□□□ 1.25
SF1-213ENST00000472725 FAM184AQ8NB25 1140 aa22.89■■□□□ 1.25
SF1-213ENST00000472725 INTS4Q96HW7 963 aaKnown RBP22.89■■□□□ 1.25
SF1-213ENST00000472725 ABHD8Q96I13 439 aa22.89■■□□□ 1.25
SF1-213ENST00000472725 PHF20Q9BVI0 1012 aa22.89■■□□□ 1.25
SF1-213ENST00000472725 PCDHA4Q9UN74 947 aa22.89■■□□□ 1.25
SF1-213ENST00000472725 LRRC37A2A6NM11 1700 aa22.88■■□□□ 1.25
SF1-213ENST00000472725 EIF3JO75822 258 aaKnown RBP22.88■■□□□ 1.25
SF1-213ENST00000472725 CCL5P13501 91 aa22.88■■□□□ 1.25
SF1-213ENST00000472725 TRIM32Q13049 653 aa22.88■■□□□ 1.25
SF1-213ENST00000472725 PGM5Q15124 567 aa22.88■■□□□ 1.25
SF1-213ENST00000472725 VSIG10LQ86VR7 867 aa22.88■■□□□ 1.25
SF1-213ENST00000472725 AIFM3Q96NN9 605 aa22.88■■□□□ 1.25
SF1-213ENST00000472725 PAK6Q9NQU5 681 aaPredicted RBP22.88■■□□□ 1.25
SF1-213ENST00000472725 PCDHA6Q9UN73 950 aa22.88■■□□□ 1.25
SF1-213ENST00000472725 PCDHA8Q9Y5H6 950 aa22.88■■□□□ 1.25
SF1-213ENST00000472725 SEPT4O43236 478 aa22.87■■□□□ 1.25
SF1-213ENST00000472725 ZNF865P0CJ78 1059 aaPredicted RBP22.87■■□□□ 1.25
SF1-213ENST00000472725 EIF2AK2P19525 551 aaKnown RBP22.87■■□□□ 1.25
SF1-213ENST00000472725 CCND2P30279 289 aa22.87■■□□□ 1.25
SF1-213ENST00000472725 UBE2SQ16763 222 aa22.87■■□□□ 1.25
SF1-213ENST00000472725 PCNX4Q63HM2 1172 aa22.87■■□□□ 1.25
SF1-213ENST00000472725 BLIDQ8IZY5 108 aa22.87■■□□□ 1.25
SF1-213ENST00000472725 SHISA4Q96DD7 197 aa22.87■■□□□ 1.25
SF1-213ENST00000472725 TMEM106CQ9BVX2 250 aa22.87■■□□□ 1.25
SF1-213ENST00000472725 KATNBL1Q9H079 304 aa22.87■■□□□ 1.25
SF1-213ENST00000472725 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.87■■□□□ 1.252e-11■■■■■ 64.9
SF1-213ENST00000472725 BRMS1Q9HCU9 246 aa22.87■■□□□ 1.25
SF1-213ENST00000472725 AKR1A1P14550 325 aa22.86■■□□□ 1.25
SF1-213ENST00000472725 RNF208Q9H0X6 261 aa22.86■■□□□ 1.25
SF1-213ENST00000472725 UNC93B1Q9H1C4 597 aa22.86■■□□□ 1.25
SF1-213ENST00000472725 FAM184BQ9ULE4 1060 aa22.86■■□□□ 1.25
SF1-213ENST00000472725 SMC3Q9UQE7 1217 aa22.86■■□□□ 1.25
SF1-213ENST00000472725 KIAA1217Q5T5P2 1943 aa22.86■■□□□ 1.25
SF1-213ENST00000472725 RBM47A0AV96 593 aaKnown RBP22.85■■□□□ 1.25
SF1-213ENST00000472725 GJB1P08034 283 aa22.85■■□□□ 1.25
SF1-213ENST00000472725 MTFR1Q15390 333 aa22.85■■□□□ 1.25
SF1-213ENST00000472725 IQSEC1Q6DN90 963 aa22.85■■□□□ 1.25
SF1-213ENST00000472725 TRPV1Q8NER1 839 aa22.85■■□□□ 1.25
SF1-213ENST00000472725 C8orf76Q96K31 380 aa22.85■■□□□ 1.25
SF1-213ENST00000472725 ANO3Q9BYT9 981 aa22.85■■□□□ 1.25
SF1-213ENST00000472725 ZHX1Q9UKY1 873 aaPredicted RBP22.85■■□□□ 1.25
SF1-213ENST00000472725 HTTP42858 3142 aa22.84■■□□□ 1.25
SF1-213ENST00000472725 M0R2N6 131 aa22.84■■□□□ 1.25
SF1-213ENST00000472725 CCND3P30281 292 aaPredicted RBP22.84■■□□□ 1.25
SF1-213ENST00000472725 SREBF1P36956 1147 aa22.84■■□□□ 1.25
SF1-213ENST00000472725 NPY5RQ15761 445 aa22.84■■□□□ 1.25
SF1-213ENST00000472725 PRAMEF19Q5SWL8 479 aa22.84■■□□□ 1.25
SF1-213ENST00000472725 KCNV1Q6PIU1 500 aa22.84■■□□□ 1.25
SF1-213ENST00000472725 DDX20Q9UHI6 824 aaKnown RBP22.84■■□□□ 1.25
SF1-213ENST00000472725 MMP1P03956 469 aa22.83■■□□□ 1.25
SF1-213ENST00000472725 CNGA1P29973 690 aa22.83■■□□□ 1.25
SF1-213ENST00000472725 SAFBQ15424 915 aaKnown RBP eCLIP22.83■■□□□ 1.25
SF1-213ENST00000472725 GNPTABQ3T906 1256 aa22.83■■□□□ 1.25
SF1-213ENST00000472725 JAKMIP3Q5VZ66 844 aa22.83■■□□□ 1.25
SF1-213ENST00000472725 KRT40Q6A162 431 aa22.83■■□□□ 1.25
SF1-213ENST00000472725 TAPT1Q6NXT6 567 aa22.83■■□□□ 1.25
SF1-213ENST00000472725 KRT25Q7Z3Z0 450 aa22.83■■□□□ 1.25
SF1-213ENST00000472725 FBXO18Q8NFZ0 1043 aa22.83■■□□□ 1.25
SF1-213ENST00000472725 SCFD2Q8WU76 684 aa22.83■■□□□ 1.25
SF1-213ENST00000472725 KCNJ14Q9UNX9 436 aa22.83■■□□□ 1.25
SF1-213ENST00000472725 NKRFO15226 690 aaKnown RBP eCLIP22.82■■□□□ 1.242e-6■■■□□ 17.1
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms