RNA–Protein interactions for RNA: ENST00000472397.5

SCAMP3-205, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 3

Gene SCAMP3, Length 1,030 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-205ENST00000472397 RILPL2Q969X0 211 aa11.89□□□□□ -0.51
SCAMP3-205ENST00000472397 TAAR1Q96RJ0 339 aa11.89□□□□□ -0.51
SCAMP3-205ENST00000472397 CRBNQ96SW2 442 aa11.89□□□□□ -0.51
SCAMP3-205ENST00000472397 ALG1Q9BT22 464 aa11.89□□□□□ -0.51
SCAMP3-205ENST00000472397 EPHX3Q9H6B9 360 aa11.89□□□□□ -0.51
SCAMP3-205ENST00000472397 ADD3Q9UEY8 706 aaKnown RBP11.89□□□□□ -0.51
SCAMP3-205ENST00000472397 SYNPO2Q9UMS6 1093 aa11.89□□□□□ -0.51
SCAMP3-205ENST00000472397 Q9Y3F1 56 aa11.89□□□□□ -0.51
SCAMP3-205ENST00000472397 MTCH2Q9Y6C9 303 aa11.89□□□□□ -0.51
SCAMP3-205ENST00000472397 TRIM6-TRIM34B2RNG4 842 aa11.88□□□□□ -0.51
SCAMP3-205ENST00000472397 IQCF3P0C7M6 154 aa11.88□□□□□ -0.51
SCAMP3-205ENST00000472397 PDHBP11177 359 aa11.88□□□□□ -0.51
SCAMP3-205ENST00000472397 BMP1P13497 986 aa11.88□□□□□ -0.51
SCAMP3-205ENST00000472397 CPT1AP50416 773 aa11.88□□□□□ -0.51
SCAMP3-205ENST00000472397 TAP1Q03518 808 aa11.88□□□□□ -0.51
SCAMP3-205ENST00000472397 GDF6Q6KF10 455 aaPredicted RBP11.88□□□□□ -0.51
SCAMP3-205ENST00000472397 B4GALNT3Q6L9W6 998 aa11.88□□□□□ -0.51
SCAMP3-205ENST00000472397 ZBTB47Q9UFB7 747 aaPredicted RBP11.88□□□□□ -0.51
SCAMP3-205ENST00000472397 NEDD4P46934 1319 aa11.87□□□□□ -0.51
SCAMP3-205ENST00000472397 RBM47A0AV96 593 aaKnown RBP11.87□□□□□ -0.51
SCAMP3-205ENST00000472397 FAM86C2PA6NEL3 165 aa11.87□□□□□ -0.51
SCAMP3-205ENST00000472397 ORC4O43929 436 aa11.87□□□□□ -0.51
SCAMP3-205ENST00000472397 DHX16O60231 1041 aaKnown RBP11.87□□□□□ -0.51
SCAMP3-205ENST00000472397 SUPT20HL2P0C7V6 817 aa11.87□□□□□ -0.51
SCAMP3-205ENST00000472397 ATXN8OSP0DMR3 200 aa11.87□□□□□ -0.51
SCAMP3-205ENST00000472397 DEFB103AP81534 67 aa11.87□□□□□ -0.51
SCAMP3-205ENST00000472397 ZNF200P98182 395 aaPredicted RBP11.87□□□□□ -0.51
SCAMP3-205ENST00000472397 ZNF543Q08ER8 600 aa11.87□□□□□ -0.51
SCAMP3-205ENST00000472397 GRB10Q13322 594 aa11.87□□□□□ -0.51
SCAMP3-205ENST00000472397 PTGISQ16647 500 aa11.87□□□□□ -0.51
SCAMP3-205ENST00000472397 BTNL9Q6UXG8 535 aa11.87□□□□□ -0.51
SCAMP3-205ENST00000472397 HERC6Q8IVU3 1022 aa11.87□□□□□ -0.51
SCAMP3-205ENST00000472397 GDPD5Q8WTR4 605 aa11.87□□□□□ -0.51
SCAMP3-205ENST00000472397 KHSRPQ92945 711 aaKnown RBP eCLIP11.87□□□□□ -0.51
SCAMP3-205ENST00000472397 TSPYL2Q9H2G4 693 aaPredicted RBP11.87□□□□□ -0.51
SCAMP3-205ENST00000472397 COL20A1Q9P218 1284 aa11.87□□□□□ -0.51
SCAMP3-205ENST00000472397 ANAPC4Q9UJX5 808 aa11.87□□□□□ -0.51
SCAMP3-205ENST00000472397 PRRC2BQ5JSZ5 2229 aaKnown RBP11.87□□□□□ -0.51
SCAMP3-205ENST00000472397 SALL3Q9BXA9 1300 aa11.86□□□□□ -0.51
SCAMP3-205ENST00000472397 GTPBP6O43824 516 aaPredicted RBP11.86□□□□□ -0.51
SCAMP3-205ENST00000472397 TLL1O43897 1013 aa11.86□□□□□ -0.51
SCAMP3-205ENST00000472397 HSPD1P10809 573 aaKnown RBP11.86□□□□□ -0.51
SCAMP3-205ENST00000472397 ACTN1P12814 892 aa11.86□□□□□ -0.51
SCAMP3-205ENST00000472397 EIF2AK2P19525 551 aaKnown RBP11.86□□□□□ -0.51
SCAMP3-205ENST00000472397 NOVP48745 357 aa11.86□□□□□ -0.51
SCAMP3-205ENST00000472397 GPNMBQ14956 572 aa11.86□□□□□ -0.51
SCAMP3-205ENST00000472397 MCMDC2Q4G0Z9 681 aa11.86□□□□□ -0.51
SCAMP3-205ENST00000472397 SCFD2Q8WU76 684 aa11.86□□□□□ -0.51
SCAMP3-205ENST00000472397 DHX38Q92620 1227 aaKnown RBP11.86□□□□□ -0.51
SCAMP3-205ENST00000472397 EVI5LQ96CN4 794 aa11.86□□□□□ -0.51
SCAMP3-205ENST00000472397 ZBED2Q9BTP6 218 aa11.86□□□□□ -0.51
SCAMP3-205ENST00000472397 LNPKQ9C0E8 428 aa11.86□□□□□ -0.51
SCAMP3-205ENST00000472397 HELLSQ9NRZ9 838 aa11.86□□□□□ -0.51
SCAMP3-205ENST00000472397 ZNF286BP0CG31 522 aa11.85□□□□□ -0.51
SCAMP3-205ENST00000472397 PDE1AP54750 535 aa11.85□□□□□ -0.51
SCAMP3-205ENST00000472397 CDC37Q16543 378 aaPredicted RBP11.85□□□□□ -0.51
SCAMP3-205ENST00000472397 PPP4R3BQ5MIZ7 849 aa11.85□□□□□ -0.51
SCAMP3-205ENST00000472397 MFSD6Q6ZSS7 791 aa11.85□□□□□ -0.51
SCAMP3-205ENST00000472397 TET1Q8NFU7 2136 aa11.85□□□□□ -0.51
SCAMP3-205ENST00000472397 WNT8BQ93098 351 aa11.85□□□□□ -0.51
SCAMP3-205ENST00000472397 CHD7Q9P2D1 2997 aa11.85□□□□□ -0.51
SCAMP3-205ENST00000472397 A6NJR5 290 aa11.84□□□□□ -0.51
SCAMP3-205ENST00000472397 B4E1Z4 1266 aa11.84□□□□□ -0.51
SCAMP3-205ENST00000472397 MMP3P08254 477 aa11.84□□□□□ -0.51
SCAMP3-205ENST00000472397 FGRP09769 529 aa11.84□□□□□ -0.51
SCAMP3-205ENST00000472397 KCNJ6P48051 423 aa11.84□□□□□ -0.51
SCAMP3-205ENST00000472397 ARHGAP1Q07960 439 aa11.84□□□□□ -0.51
SCAMP3-205ENST00000472397 HIC1Q14526 733 aa11.84□□□□□ -0.51
SCAMP3-205ENST00000472397 ALX1Q15699 326 aa11.84□□□□□ -0.51
SCAMP3-205ENST00000472397 BRDTQ58F21 947 aaPredicted RBP11.84□□□□□ -0.51
SCAMP3-205ENST00000472397 ADGRF4Q8IZF3 695 aa11.84□□□□□ -0.51
SCAMP3-205ENST00000472397 SYTL5Q8TDW5 730 aaPredicted RBP11.84□□□□□ -0.51
SCAMP3-205ENST00000472397 KAT2BQ92831 832 aa11.84□□□□□ -0.51
SCAMP3-205ENST00000472397 CTAGE1Q96RT6 745 aa11.84□□□□□ -0.51
SCAMP3-205ENST00000472397 HDAC6Q9UBN7 1215 aa11.84□□□□□ -0.51
SCAMP3-205ENST00000472397 REV3LO60673 3130 aa11.84□□□□□ -0.51
SCAMP3-205ENST00000472397 RAD50Q92878 1312 aa11.84□□□□□ -0.51
SCAMP3-205ENST00000472397 LPXNO60711 386 aa11.83□□□□□ -0.52
SCAMP3-205ENST00000472397 NBNO60934 754 aa11.83□□□□□ -0.52
SCAMP3-205ENST00000472397 KDM4AO75164 1064 aa11.83□□□□□ -0.52
SCAMP3-205ENST00000472397 CFBP00751 764 aa11.83□□□□□ -0.52
SCAMP3-205ENST00000472397 GH1P01241 217 aa11.83□□□□□ -0.52
SCAMP3-205ENST00000472397 MYCLP12524 364 aaPredicted RBP11.83□□□□□ -0.52
SCAMP3-205ENST00000472397 EDNRBP24530 442 aa11.83□□□□□ -0.52
SCAMP3-205ENST00000472397 PSEN2P49810 448 aa11.83□□□□□ -0.52
SCAMP3-205ENST00000472397 WDR5P61964 334 aaKnown RBP11.83□□□□□ -0.52
SCAMP3-205ENST00000472397 BFSP2Q13515 415 aa11.83□□□□□ -0.52
SCAMP3-205ENST00000472397 NFRKBQ6P4R8 1299 aa11.83□□□□□ -0.52
SCAMP3-205ENST00000472397 CCDC62Q6P9F0 684 aa11.83□□□□□ -0.52
SCAMP3-205ENST00000472397 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.83□□□□□ -0.524e-6■■■■□ 20
SCAMP3-205ENST00000472397 LRRC8DQ7L1W4 858 aa11.83□□□□□ -0.52
SCAMP3-205ENST00000472397 FAM122AQ96E09 287 aa11.83□□□□□ -0.52
SCAMP3-205ENST00000472397 SLC9A7Q96T83 725 aa11.83□□□□□ -0.52
SCAMP3-205ENST00000472397 CD320Q9NPF0 282 aa11.83□□□□□ -0.52
SCAMP3-205ENST00000472397 TRIP12Q14669 1992 aaPredicted RBP11.83□□□□□ -0.52
SCAMP3-205ENST00000472397 CCDC171Q6TFL3 1326 aa11.83□□□□□ -0.52
SCAMP3-205ENST00000472397 KIF28PB7ZC32 967 aa11.82□□□□□ -0.52
SCAMP3-205ENST00000472397 NKRFO15226 690 aaKnown RBP eCLIP11.82□□□□□ -0.52
SCAMP3-205ENST00000472397 CSPG5O95196 566 aa11.82□□□□□ -0.52
SCAMP3-205ENST00000472397 PFKMP08237 780 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms