RNA–Protein interactions for RNA: ENST00000472282.5

SMC4-213, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 667 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-213ENST00000472282 MDM2Q00987 491 aaPredicted RBP10.7□□□□□ -0.7
SMC4-213ENST00000472282 LRRC41Q15345 812 aa10.7□□□□□ -0.7
SMC4-213ENST00000472282 PLA2G2CQ5R387 149 aa10.7□□□□□ -0.7
SMC4-213ENST00000472282 KCTD1Q719H9 257 aa10.7□□□□□ -0.7
SMC4-213ENST00000472282 CYB5R4Q7L1T6 521 aa10.7□□□□□ -0.7
SMC4-213ENST00000472282 NCOA7Q8NI08 942 aa10.7□□□□□ -0.7
SMC4-213ENST00000472282 FERMT2Q96AC1 680 aa10.7□□□□□ -0.7
SMC4-213ENST00000472282 TCP11L1Q9NUJ3 509 aa10.7□□□□□ -0.7
SMC4-213ENST00000472282 SYNPO2Q9UMS6 1093 aa10.7□□□□□ -0.7
SMC4-213ENST00000472282 MTMR7Q9Y216 660 aa10.7□□□□□ -0.7
SMC4-213ENST00000472282 DIS3Q9Y2L1 958 aaKnown RBP10.7□□□□□ -0.7
SMC4-213ENST00000472282 TNKSO95271 1327 aa10.69□□□□□ -0.7
SMC4-213ENST00000472282 A0A1W2PPC1 479 aa10.69□□□□□ -0.7
SMC4-213ENST00000472282 ADCY6O43306 1168 aa10.69□□□□□ -0.7
SMC4-213ENST00000472282 EPB41L2O43491 1005 aaKnown RBP10.69□□□□□ -0.7
SMC4-213ENST00000472282 ZBED4O75132 1171 aa10.69□□□□□ -0.7
SMC4-213ENST00000472282 PGK1P00558 417 aa10.69□□□□□ -0.7
SMC4-213ENST00000472282 ADCYAP1R1P41586 468 aa10.69□□□□□ -0.7
SMC4-213ENST00000472282 NOVP48745 357 aa10.69□□□□□ -0.7
SMC4-213ENST00000472282 NT5C2P49902 561 aa10.69□□□□□ -0.7
SMC4-213ENST00000472282 COL9A3Q14050 684 aaPredicted RBP10.69□□□□□ -0.7
SMC4-213ENST00000472282 SLC39A5Q6ZMH5 540 aa10.69□□□□□ -0.7
SMC4-213ENST00000472282 IQCA1Q86XH1 822 aa10.69□□□□□ -0.7
SMC4-213ENST00000472282 MB21D2Q8IYB1 491 aaPredicted RBP10.69□□□□□ -0.7
SMC4-213ENST00000472282 AGBL1Q96MI9 1066 aa10.69□□□□□ -0.7
SMC4-213ENST00000472282 USP26Q9BXU7 913 aa10.69□□□□□ -0.7
SMC4-213ENST00000472282 HOMER2Q9NSB8 354 aa10.69□□□□□ -0.7
SMC4-213ENST00000472282 ZSWIM5Q9P217 1185 aa10.69□□□□□ -0.7
SMC4-213ENST00000472282 ISY1Q9ULR0 285 aaKnown RBP10.69□□□□□ -0.7
SMC4-213ENST00000472282 DDX49Q9Y6V7 483 aaKnown RBP10.69□□□□□ -0.7
SMC4-213ENST00000472282 BAZ2BQ9UIF8 2168 aaKnown RBP10.69□□□□□ -0.7
SMC4-213ENST00000472282 MYADML2A6NDP7 307 aa10.68□□□□□ -0.7
SMC4-213ENST00000472282 KBTBD13C9JR72 458 aa10.68□□□□□ -0.7
SMC4-213ENST00000472282 TULP1O00294 542 aaPredicted RBP10.68□□□□□ -0.7
SMC4-213ENST00000472282 ADAMTS4O75173 837 aa10.68□□□□□ -0.7
SMC4-213ENST00000472282 COPB2P35606 906 aa10.68□□□□□ -0.7
SMC4-213ENST00000472282 SLC1A4P43007 532 aa10.68□□□□□ -0.7
SMC4-213ENST00000472282 STAT2P52630 851 aa10.68□□□□□ -0.7
SMC4-213ENST00000472282 ANTXR2P58335 489 aa10.68□□□□□ -0.7
SMC4-213ENST00000472282 CNTN2Q02246 1040 aa10.68□□□□□ -0.7
SMC4-213ENST00000472282 SNX17Q15036 470 aa10.68□□□□□ -0.7
SMC4-213ENST00000472282 ADCK5Q3MIX3 580 aa10.68□□□□□ -0.7
SMC4-213ENST00000472282 TRIM60Q495X7 471 aa10.68□□□□□ -0.7
SMC4-213ENST00000472282 TTBK2Q6IQ55 1244 aa10.68□□□□□ -0.7
SMC4-213ENST00000472282 RCSD1Q6JBY9 416 aa10.68□□□□□ -0.7
SMC4-213ENST00000472282 MAMDC4Q6UXC1 1216 aa10.68□□□□□ -0.7
SMC4-213ENST00000472282 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.68□□□□□ -0.71e-6■■■■■ 406.9
SMC4-213ENST00000472282 CHST3Q7LGC8 479 aa10.68□□□□□ -0.7
SMC4-213ENST00000472282 ENAHQ8N8S7 591 aaPredicted RBP10.68□□□□□ -0.7
SMC4-213ENST00000472282 ARRDC4Q8NCT1 418 aa10.68□□□□□ -0.7
SMC4-213ENST00000472282 KCNB2Q92953 911 aa10.68□□□□□ -0.7
SMC4-213ENST00000472282 DDX11Q96FC9 970 aa10.68□□□□□ -0.7
SMC4-213ENST00000472282 GMCL1Q96IK5 515 aa10.68□□□□□ -0.7
SMC4-213ENST00000472282 ZSCAN10Q96SZ4 725 aaPredicted RBP10.68□□□□□ -0.7
SMC4-213ENST00000472282 TMEM47Q9BQJ4 181 aa10.68□□□□□ -0.7
SMC4-213ENST00000472282 UBAC1Q9BSL1 405 aa10.68□□□□□ -0.7
SMC4-213ENST00000472282 UBE2OQ9C0C9 1292 aaKnown RBP10.68□□□□□ -0.7
SMC4-213ENST00000472282 XPNPEP3Q9NQH7 507 aa10.68□□□□□ -0.7
SMC4-213ENST00000472282 PRR12Q9ULL5 1215 aa10.68□□□□□ -0.7
SMC4-213ENST00000472282 ATP11BQ9Y2G3 1177 aa10.68□□□□□ -0.7
SMC4-213ENST00000472282 SNX14Q9Y5W7 946 aa10.68□□□□□ -0.7
SMC4-213ENST00000472282 ASTN1O14525 1302 aa10.67□□□□□ -0.7
SMC4-213ENST00000472282 RARBP10826 455 aa10.67□□□□□ -0.7
SMC4-213ENST00000472282 TOP1P11387 765 aaKnown RBP10.67□□□□□ -0.7
SMC4-213ENST00000472282 AKR1A1P14550 325 aa10.67□□□□□ -0.7
SMC4-213ENST00000472282 PTGS1P23219 599 aa10.67□□□□□ -0.7
SMC4-213ENST00000472282 SLC16A2P36021 539 aa10.67□□□□□ -0.7
SMC4-213ENST00000472282 OAZ1P54368 228 aa10.67□□□□□ -0.7
SMC4-213ENST00000472282 FOXC1Q12948 553 aa10.67□□□□□ -0.7
SMC4-213ENST00000472282 KRT32Q14532 448 aa10.67□□□□□ -0.7
SMC4-213ENST00000472282 TSGA10IPQ3SY00 556 aa10.67□□□□□ -0.7
SMC4-213ENST00000472282 CCDC178Q5BJE1 867 aa10.67□□□□□ -0.7
SMC4-213ENST00000472282 MUM1L1Q5H9M0 696 aa10.67□□□□□ -0.7
SMC4-213ENST00000472282 CCDC174Q6PII3 467 aa10.67□□□□□ -0.7
SMC4-213ENST00000472282 SH3RF1Q7Z6J0 888 aa10.67□□□□□ -0.7
SMC4-213ENST00000472282 TDHQ8IZJ6 230 aa10.67□□□□□ -0.7
SMC4-213ENST00000472282 ANKRD35Q8N283 1001 aa10.67□□□□□ -0.7
SMC4-213ENST00000472282 CHST13Q8NET6 341 aa10.67□□□□□ -0.7
SMC4-213ENST00000472282 THAP11Q96EK4 314 aa10.67□□□□□ -0.7
SMC4-213ENST00000472282 NEK1Q96PY6 1258 aa10.67□□□□□ -0.7
SMC4-213ENST00000472282 KATNBL1Q9H079 304 aa10.67□□□□□ -0.7
SMC4-213ENST00000472282 A1CFQ9NQ94 594 aaKnown RBP10.67□□□□□ -0.7
SMC4-213ENST00000472282 RNF146Q9NTX7 359 aa10.67□□□□□ -0.7
SMC4-213ENST00000472282 NRBP1Q9UHY1 535 aa10.67□□□□□ -0.7
SMC4-213ENST00000472282 ZHX1Q9UKY1 873 aaPredicted RBP10.67□□□□□ -0.7
SMC4-213ENST00000472282 PHF24Q9UPV7 400 aa10.67□□□□□ -0.7
SMC4-213ENST00000472282 SLC27A5Q9Y2P5 690 aa10.67□□□□□ -0.7
SMC4-213ENST00000472282 FCF1Q9Y324 198 aaKnown RBP10.67□□□□□ -0.7
SMC4-213ENST00000472282 CTDP1Q9Y5B0 961 aaPredicted RBP10.67□□□□□ -0.7
SMC4-213ENST00000472282 FRMPD2Q68DX3 1309 aaPredicted RBP10.66□□□□□ -0.7
SMC4-213ENST00000472282 SYNGAP1Q96PV0 1343 aa10.66□□□□□ -0.7
SMC4-213ENST00000472282 SYNRGQ9UMZ2 1314 aa10.66□□□□□ -0.7
SMC4-213ENST00000472282 SZT2Q5T011 3432 aa10.66□□□□□ -0.7
SMC4-213ENST00000472282 IFIT3O14879 490 aaKnown RBP10.66□□□□□ -0.7
SMC4-213ENST00000472282 PRC1O43663 620 aa10.66□□□□□ -0.7
SMC4-213ENST00000472282 EIF5BO60841 1220 aaKnown RBP10.66□□□□□ -0.7
SMC4-213ENST00000472282 ALAS1P13196 640 aa10.66□□□□□ -0.7
SMC4-213ENST00000472282 MCM5P33992 734 aa10.66□□□□□ -0.7
SMC4-213ENST00000472282 IKQ13123 557 aaPredicted RBP10.66□□□□□ -0.7
SMC4-213ENST00000472282 SART3Q15020 963 aaKnown RBP10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms