RNA–Protein interactions for RNA: ENST00000472224.1

CLRN1-205, Transcript of clarin 1, humanhuman

TSL 3

Gene CLRN1, Length 606 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-205ENST00000472224 GOLGA8BA8MQT2 603 aa13.75□□□□□ -0.21
CLRN1-205ENST00000472224 SEPT4O43236 478 aa13.75□□□□□ -0.21
CLRN1-205ENST00000472224 ZBTB43O43298 467 aa13.75□□□□□ -0.21
CLRN1-205ENST00000472224 CYTH3O43739 400 aa13.75□□□□□ -0.21
CLRN1-205ENST00000472224 MSCO60682 206 aa13.75□□□□□ -0.21
CLRN1-205ENST00000472224 PPP1R11O60927 126 aaPredicted RBP13.75□□□□□ -0.21
CLRN1-205ENST00000472224 IGHA2P01877 340 aa13.75□□□□□ -0.21
CLRN1-205ENST00000472224 RPS6KB1P23443 525 aa13.75□□□□□ -0.21
CLRN1-205ENST00000472224 ITGB8P26012 769 aa13.75□□□□□ -0.21
CLRN1-205ENST00000472224 GNAQP50148 359 aa13.75□□□□□ -0.21
CLRN1-205ENST00000472224 TRIM60Q495X7 471 aa13.75□□□□□ -0.21
CLRN1-205ENST00000472224 APOA5Q6Q788 366 aa13.75□□□□□ -0.21
CLRN1-205ENST00000472224 SLC39A5Q6ZMH5 540 aa13.75□□□□□ -0.21
CLRN1-205ENST00000472224 Q6ZUG5 572 aa13.75□□□□□ -0.21
CLRN1-205ENST00000472224 ZNF467Q7Z7K2 595 aaPredicted RBP13.75□□□□□ -0.21
CLRN1-205ENST00000472224 SGMS1Q86VZ5 419 aa13.75□□□□□ -0.21
CLRN1-205ENST00000472224 MSL3Q8N5Y2 521 aaKnown RBP13.75□□□□□ -0.21
CLRN1-205ENST00000472224 BRF1Q92994 677 aa13.75□□□□□ -0.21
CLRN1-205ENST00000472224 LENG1Q96BZ8 264 aaPredicted RBP13.75□□□□□ -0.21
CLRN1-205ENST00000472224 SEC63Q9UGP8 760 aaKnown RBP13.75□□□□□ -0.21
CLRN1-205ENST00000472224 BRPF3Q9ULD4 1205 aa13.75□□□□□ -0.21
CLRN1-205ENST00000472224 MRPL11Q9Y3B7 192 aaKnown RBP13.75□□□□□ -0.21
CLRN1-205ENST00000472224 ASTN1O14525 1302 aa13.74□□□□□ -0.21
CLRN1-205ENST00000472224 ASB14A6NK59 587 aa13.74□□□□□ -0.21
CLRN1-205ENST00000472224 EPB41L2O43491 1005 aaKnown RBP13.74□□□□□ -0.21
CLRN1-205ENST00000472224 RPS6P62753 249 aaKnown RBP13.74□□□□□ -0.21
CLRN1-205ENST00000472224 APOBRQ0VD83 1088 aa13.74□□□□□ -0.21
CLRN1-205ENST00000472224 SNX17Q15036 470 aa13.74□□□□□ -0.21
CLRN1-205ENST00000472224 RTN1Q16799 776 aa13.74□□□□□ -0.21
CLRN1-205ENST00000472224 GJC2Q5T442 439 aaPredicted RBP13.74□□□□□ -0.21
CLRN1-205ENST00000472224 EEPD1Q7L9B9 569 aa13.74□□□□□ -0.21
CLRN1-205ENST00000472224 CCDC82Q8N4S0 544 aa13.74□□□□□ -0.21
CLRN1-205ENST00000472224 MTMR8Q96EF0 704 aa13.74□□□□□ -0.21
CLRN1-205ENST00000472224 RRP36Q96EU6 259 aaKnown RBP13.74□□□□□ -0.21
CLRN1-205ENST00000472224 ASB2Q96Q27 587 aa13.74□□□□□ -0.21
CLRN1-205ENST00000472224 MAP3K14Q99558 947 aa13.74□□□□□ -0.21
CLRN1-205ENST00000472224 SPZ1Q9BXG8 430 aa13.74□□□□□ -0.21
CLRN1-205ENST00000472224 TSPYL2Q9H2G4 693 aaPredicted RBP13.74□□□□□ -0.21
CLRN1-205ENST00000472224 RIOX1Q9H6W3 641 aa13.74□□□□□ -0.21
CLRN1-205ENST00000472224 CHD7Q9P2D1 2997 aa13.74□□□□□ -0.21
CLRN1-205ENST00000472224 PCDHA1Q9Y5I3 950 aa13.74□□□□□ -0.21
CLRN1-205ENST00000472224 PNMA6FA0A0J9YX94 578 aa13.73□□□□□ -0.21
CLRN1-205ENST00000472224 hCG_1642624A0A1W2PR95 340 aa13.73□□□□□ -0.21
CLRN1-205ENST00000472224 SNAI1O95863 264 aaPredicted RBP13.73□□□□□ -0.21
CLRN1-205ENST00000472224 CFBP00751 764 aa13.73□□□□□ -0.21
CLRN1-205ENST00000472224 ZNF865P0CJ78 1059 aaPredicted RBP13.73□□□□□ -0.21
CLRN1-205ENST00000472224 RARBP10826 455 aa13.73□□□□□ -0.21
CLRN1-205ENST00000472224 AKR1A1P14550 325 aa13.73□□□□□ -0.21
CLRN1-205ENST00000472224 DNAJB2P25686 324 aa13.73□□□□□ -0.21
CLRN1-205ENST00000472224 ALDH5A1P51649 535 aaPredicted RBP13.73□□□□□ -0.21
CLRN1-205ENST00000472224 ACVR2BQ13705 512 aa13.73□□□□□ -0.21
CLRN1-205ENST00000472224 MAMDC4Q6UXC1 1216 aa13.73□□□□□ -0.21
CLRN1-205ENST00000472224 TMTC3Q6ZXV5 915 aa13.73□□□□□ -0.21
CLRN1-205ENST00000472224 MCF2L2Q86YR7 1114 aa13.73□□□□□ -0.21
CLRN1-205ENST00000472224 FBXO16Q8IX29 292 aaPredicted RBP13.73□□□□□ -0.21
CLRN1-205ENST00000472224 SRBD1Q8N5C6 995 aaKnown RBP13.73□□□□□ -0.21
CLRN1-205ENST00000472224 FANCBQ8NB91 859 aa13.73□□□□□ -0.21
CLRN1-205ENST00000472224 ATXN2LQ8WWM7 1075 aaKnown RBP13.73□□□□□ -0.21
CLRN1-205ENST00000472224 RNPC3Q96LT9 517 aaKnown RBP13.73□□□□□ -0.21
CLRN1-205ENST00000472224 LZTS2Q9BRK4 669 aa13.73□□□□□ -0.21
CLRN1-205ENST00000472224 UPF3BQ9BZI7 483 aaKnown RBP13.73□□□□□ -0.21
CLRN1-205ENST00000472224 ADD3Q9UEY8 706 aaKnown RBP13.73□□□□□ -0.21
CLRN1-205ENST00000472224 NRBP1Q9UHY1 535 aa13.73□□□□□ -0.21
CLRN1-205ENST00000472224 CIZ1Q9ULV3 898 aaPredicted RBP13.73□□□□□ -0.21
CLRN1-205ENST00000472224 METAP2P50579 478 aaKnown RBP eCLIP13.72□□□□□ -0.21
CLRN1-205ENST00000472224 NOL8Q76FK4 1167 aaKnown RBP13.72□□□□□ -0.21
CLRN1-205ENST00000472224 PPM1EQ8WY54 764 aa13.72□□□□□ -0.21
CLRN1-205ENST00000472224 TBC1D5Q92609 795 aa13.72□□□□□ -0.21
CLRN1-205ENST00000472224 UHRF1Q96T88 793 aaPredicted RBP13.72□□□□□ -0.21
CLRN1-205ENST00000472224 ABHD16BQ9H3Z7 469 aa13.72□□□□□ -0.21
CLRN1-205ENST00000472224 XPNPEP3Q9NQH7 507 aa13.72□□□□□ -0.21
CLRN1-205ENST00000472224 RBM28Q9NW13 759 aaKnown RBP13.72□□□□□ -0.21
CLRN1-205ENST00000472224 FAM184BQ9ULE4 1060 aa13.72□□□□□ -0.21
CLRN1-205ENST00000472224 CYP46A1Q9Y6A2 500 aa13.72□□□□□ -0.21
CLRN1-205ENST00000472224 KIAA1217Q5T5P2 1943 aa13.72□□□□□ -0.21
CLRN1-205ENST00000472224 TCF20Q9UGU0 1960 aaKnown RBP13.71□□□□□ -0.21
CLRN1-205ENST00000472224 KBTBD13C9JR72 458 aa13.71□□□□□ -0.21
CLRN1-205ENST00000472224 HAX1O00165 279 aa13.71□□□□□ -0.21
CLRN1-205ENST00000472224 EIF5BO60841 1220 aaKnown RBP13.71□□□□□ -0.21
CLRN1-205ENST00000472224 PGK1P00558 417 aa13.71□□□□□ -0.21
CLRN1-205ENST00000472224 CD44P16070 742 aaKnown RBP13.71□□□□□ -0.21
CLRN1-205ENST00000472224 PDE4DQ08499 809 aa13.71□□□□□ -0.21
CLRN1-205ENST00000472224 TRAF1Q13077 416 aa13.71□□□□□ -0.21
CLRN1-205ENST00000472224 RUFY3Q7L099 469 aa13.71□□□□□ -0.21
CLRN1-205ENST00000472224 MPHOSPH6Q99547 160 aaKnown RBP13.71□□□□□ -0.21
CLRN1-205ENST00000472224 ZNF576Q9H609 170 aa13.71□□□□□ -0.21
CLRN1-205ENST00000472224 THEGQ9P2T0 379 aa13.71□□□□□ -0.21
CLRN1-205ENST00000472224 CNTNAP5Q8WYK1 1306 aa13.7□□□□□ -0.22
CLRN1-205ENST00000472224 NCOR1O75376 2440 aa13.7□□□□□ -0.22
CLRN1-205ENST00000472224 OPLAHO14841 1288 aa13.7□□□□□ -0.22
CLRN1-205ENST00000472224 SEC24BO95487 1268 aa13.7□□□□□ -0.22
CLRN1-205ENST00000472224 EIF2AK2P19525 551 aaKnown RBP13.7□□□□□ -0.22
CLRN1-205ENST00000472224 HOXA13P31271 388 aaPredicted RBP13.7□□□□□ -0.22
CLRN1-205ENST00000472224 CCDC144BQ3MJ40 725 aa13.7□□□□□ -0.22
CLRN1-205ENST00000472224 ARHGEF16Q5VV41 709 aa13.7□□□□□ -0.22
CLRN1-205ENST00000472224 HEATR3Q7Z4Q2 680 aa13.7□□□□□ -0.22
CLRN1-205ENST00000472224 SYTL5Q8TDW5 730 aaPredicted RBP13.7□□□□□ -0.22
CLRN1-205ENST00000472224 FAM212AQ96EL1 285 aa13.7□□□□□ -0.22
CLRN1-205ENST00000472224 NECAB3Q96P71 396 aaPredicted RBP13.7□□□□□ -0.22
CLRN1-205ENST00000472224 TAAR1Q96RJ0 339 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms