RNA–Protein interactions for RNA: ENST00000471996.1

SORT1-203, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 469 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-203ENST00000471996 NHLH1Q02575 133 aa22.52■■□□□ 1.2
SORT1-203ENST00000471996 PTGISQ16647 500 aa22.52■■□□□ 1.2
SORT1-203ENST00000471996 CSPP1Q1MSJ5 1256 aa22.52■■□□□ 1.2
SORT1-203ENST00000471996 CNKSR3Q6P9H4 555 aa22.52■■□□□ 1.2
SORT1-203ENST00000471996 RANBP17Q9H2T7 1088 aaKnown RBP22.52■■□□□ 1.2
SORT1-203ENST00000471996 ZBTB40Q9NUA8 1239 aa22.52■■□□□ 1.2
SORT1-203ENST00000471996 STX8Q9UNK0 236 aa22.52■■□□□ 1.2
SORT1-203ENST00000471996 BRWD1Q9NSI6 2320 aa22.51■■□□□ 1.19
SORT1-203ENST00000471996 LINC01553A4QN01 128 aa22.51■■□□□ 1.19
SORT1-203ENST00000471996 M0R2C6 588 aa22.51■■□□□ 1.19
SORT1-203ENST00000471996 NFIBO00712 420 aa22.51■■□□□ 1.19
SORT1-203ENST00000471996 SLC3A2P08195 630 aaKnown RBP22.51■■□□□ 1.19
SORT1-203ENST00000471996 SELPP16109 830 aa22.51■■□□□ 1.19
SORT1-203ENST00000471996 PTCRAQ6ISU1 281 aaPredicted RBP22.51■■□□□ 1.19
SORT1-203ENST00000471996 RASGRP2Q7LDG7 609 aa22.51■■□□□ 1.19
SORT1-203ENST00000471996 SCFD2Q8WU76 684 aa22.51■■□□□ 1.19
SORT1-203ENST00000471996 COPS5Q92905 334 aa22.51■■□□□ 1.19
SORT1-203ENST00000471996 CTAGE1Q96RT6 745 aa22.51■■□□□ 1.19
SORT1-203ENST00000471996 KCNH6Q9H252 994 aa22.51■■□□□ 1.19
SORT1-203ENST00000471996 LCTP09848 1927 aa22.51■■□□□ 1.19
SORT1-203ENST00000471996 TET1Q8NFU7 2136 aa22.51■■□□□ 1.19
SORT1-203ENST00000471996 PTPDC1A2A3K4 754 aa22.5■■□□□ 1.19
SORT1-203ENST00000471996 GRXCR2A6NFK2 248 aa22.5■■□□□ 1.19
SORT1-203ENST00000471996 PARNO95453 639 aaKnown RBP22.5■■□□□ 1.19
SORT1-203ENST00000471996 CXCL10P02778 98 aa22.5■■□□□ 1.19
SORT1-203ENST00000471996 ZFYP08048 801 aaPredicted RBP22.5■■□□□ 1.19
SORT1-203ENST00000471996 NACAP1Q9BZK3 213 aa22.5■■□□□ 1.19
SORT1-203ENST00000471996 LRRCC1Q9C099 1032 aa22.5■■□□□ 1.19
SORT1-203ENST00000471996 ECHDC1Q9NTX5 307 aa22.5■■□□□ 1.19
SORT1-203ENST00000471996 ABHD14A-ACY1A0A1B0GW23 586 aa22.49■■□□□ 1.19
SORT1-203ENST00000471996 EDNRBP24530 442 aa22.49■■□□□ 1.19
SORT1-203ENST00000471996 PDE4DQ08499 809 aa22.49■■□□□ 1.19
SORT1-203ENST00000471996 PUS10Q3MIT2 529 aaKnown RBP22.49■■□□□ 1.19
SORT1-203ENST00000471996 LRRC8DQ7L1W4 858 aa22.49■■□□□ 1.19
SORT1-203ENST00000471996 SESTD1Q86VW0 696 aa22.49■■□□□ 1.19
SORT1-203ENST00000471996 FBXL18Q96ME1 805 aa22.49■■□□□ 1.19
SORT1-203ENST00000471996 IL17RBQ9NRM6 502 aa22.49■■□□□ 1.19
SORT1-203ENST00000471996 POTEB3A0JP26 581 aa22.48■■□□□ 1.19
SORT1-203ENST00000471996 DCXO43602 365 aa22.48■■□□□ 1.19
SORT1-203ENST00000471996 NBNO60934 754 aa22.48■■□□□ 1.19
SORT1-203ENST00000471996 TXNP10599 105 aaKnown RBP22.48■■□□□ 1.19
SORT1-203ENST00000471996 CALML3P27482 149 aa22.48■■□□□ 1.19
SORT1-203ENST00000471996 CHMP4BP1P59074 171 aa22.48■■□□□ 1.19
SORT1-203ENST00000471996 PPARAQ07869 468 aa22.48■■□□□ 1.19
SORT1-203ENST00000471996 RBL2Q08999 1139 aa22.48■■□□□ 1.19
SORT1-203ENST00000471996 TCTN1Q2MV58 587 aa22.48■■□□□ 1.19
SORT1-203ENST00000471996 GDF6Q6KF10 455 aaPredicted RBP22.48■■□□□ 1.19
SORT1-203ENST00000471996 POTEBQ6S5H4 581 aa22.48■■□□□ 1.19
SORT1-203ENST00000471996 SLC30A10Q6XR72 485 aa22.48■■□□□ 1.19
SORT1-203ENST00000471996 MPHOSPH6Q99547 160 aaKnown RBP22.48■■□□□ 1.19
SORT1-203ENST00000471996 PTPRSQ13332 1948 aa22.48■■□□□ 1.19
SORT1-203ENST00000471996 SMARCA5O60264 1052 aaPredicted RBP22.47■■□□□ 1.19
SORT1-203ENST00000471996 EFCAB14O75071 495 aa22.47■■□□□ 1.19
SORT1-203ENST00000471996 MS4A1P11836 297 aa22.47■■□□□ 1.19
SORT1-203ENST00000471996 CCDC96Q2M329 555 aa22.47■■□□□ 1.19
SORT1-203ENST00000471996 TTBK2Q6IQ55 1244 aa22.47■■□□□ 1.19
SORT1-203ENST00000471996 BTNL9Q6UXG8 535 aa22.47■■□□□ 1.19
SORT1-203ENST00000471996 NEK9Q8TD19 979 aa22.47■■□□□ 1.19
SORT1-203ENST00000471996 DCAF4Q8WV16 495 aa22.47■■□□□ 1.19
SORT1-203ENST00000471996 CLEC4DQ8WXI8 215 aa22.47■■□□□ 1.19
SORT1-203ENST00000471996 DHX38Q92620 1227 aaKnown RBP22.47■■□□□ 1.19
SORT1-203ENST00000471996 NAPBQ9H115 298 aa22.47■■□□□ 1.19
SORT1-203ENST00000471996 DDX19BQ9UMR2 479 aa22.47■■□□□ 1.19
SORT1-203ENST00000471996 MTMR7Q9Y216 660 aa22.47■■□□□ 1.19
SORT1-203ENST00000471996 TSPY2A6NKD2 308 aa22.46■■□□□ 1.19
SORT1-203ENST00000471996 NMT2O60551 498 aa22.46■■□□□ 1.19
SORT1-203ENST00000471996 SLC16A2P36021 539 aa22.46■■□□□ 1.19
SORT1-203ENST00000471996 RNF207Q6ZRF8 634 aa22.46■■□□□ 1.19
SORT1-203ENST00000471996 DNERQ8NFT8 737 aa22.46■■□□□ 1.19
SORT1-203ENST00000471996 SNX27Q96L92 541 aa22.46■■□□□ 1.19
SORT1-203ENST00000471996 CRBNQ96SW2 442 aa22.46■■□□□ 1.19
SORT1-203ENST00000471996 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.46■■□□□ 1.19
SORT1-203ENST00000471996 ARIH2O95376 493 aa22.45■■□□□ 1.18
SORT1-203ENST00000471996 CKBP12277 381 aa22.45■■□□□ 1.18
SORT1-203ENST00000471996 NOVP48745 357 aa22.45■■□□□ 1.18
SORT1-203ENST00000471996 IKBKEQ14164 716 aa22.45■■□□□ 1.18
SORT1-203ENST00000471996 SYDE2Q5VT97 1194 aa22.45■■□□□ 1.18
SORT1-203ENST00000471996 FAM117BQ6P1L5 589 aa22.45■■□□□ 1.18
SORT1-203ENST00000471996 FBXO22Q8NEZ5 403 aa22.45■■□□□ 1.18
SORT1-203ENST00000471996 CTNNA3Q9UI47 895 aa22.45■■□□□ 1.18
SORT1-203ENST00000471996 RPS6P62753 249 aaKnown RBP22.44■■□□□ 1.18
SORT1-203ENST00000471996 AFG1LQ8WV93 481 aa22.44■■□□□ 1.18
SORT1-203ENST00000471996 MRPL38Q96DV4 380 aaKnown RBP22.44■■□□□ 1.18
SORT1-203ENST00000471996 C17orf80Q9BSJ5 609 aa22.44■■□□□ 1.18
SORT1-203ENST00000471996 INSL6Q9Y581 213 aa22.44■■□□□ 1.18
SORT1-203ENST00000471996 H3BQ06 376 aaPredicted RBP22.43■■□□□ 1.18
SORT1-203ENST00000471996 MMP3P08254 477 aa22.43■■□□□ 1.18
SORT1-203ENST00000471996 CCDC62Q6P9F0 684 aa22.43■■□□□ 1.18
SORT1-203ENST00000471996 KAT2BQ92831 832 aa22.43■■□□□ 1.18
SORT1-203ENST00000471996 SEC62Q99442 399 aaKnown RBP22.43■■□□□ 1.18
SORT1-203ENST00000471996 INCENPQ9NQS7 918 aa22.43■■□□□ 1.18
SORT1-203ENST00000471996 GTF2IRD1Q9UHL9 959 aa22.43■■□□□ 1.18
SORT1-203ENST00000471996 PNMA2Q9UL42 364 aa22.43■■□□□ 1.18
SORT1-203ENST00000471996 B4DLN1 442 aa22.42■■□□□ 1.18
SORT1-203ENST00000471996 MRPL12P52815 198 aaKnown RBP22.42■■□□□ 1.18
SORT1-203ENST00000471996 PTPROQ16827 1216 aa22.42■■□□□ 1.18
SORT1-203ENST00000471996 PRKAG3Q9UGI9 489 aa22.42■■□□□ 1.18
SORT1-203ENST00000471996 ZP2Q05996 745 aa22.41■■□□□ 1.18
SORT1-203ENST00000471996 TSHZ3Q63HK5 1081 aa22.41■■□□□ 1.18
SORT1-203ENST00000471996 TRAF7Q6Q0C0 670 aa22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms