RNA–Protein interactions for RNA: ENST00000471702.2

NPHP3-ACAD11-201, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

TSL 2 BASIC

Gene NPHP3-ACAD11, Length 7,784 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-201ENST00000471702 MROH5Q6ZUA9 1318 aa14.39□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 EFCAB5A4FU69 1503 aa14.39□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 NLRP12P59046 1061 aa14.39□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 PNMA1Q8ND90 353 aa14.39□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 SRPK1Q96SB4 655 aaKnown RBP14.39□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 UHRF1BP1LA0JNW5 1464 aa14.39□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 M0R2C6 588 aa14.39□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 PPFIA4O75335 1185 aa14.39□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 CERS3Q8IU89 383 aa14.39□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 IP6K1Q92551 441 aa14.39□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 KIAA1024Q9UPX6 916 aa14.39□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 FMNL1O95466 1100 aaPredicted RBP14.38□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 CLCN1P35523 988 aa14.38□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 IFNAR2P48551 515 aa14.38□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 CCDC124Q96CT7 223 aaKnown RBP14.38□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 SUCLG2Q96I99 432 aa14.38□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 USP26Q9BXU7 913 aa14.38□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 LRRC4Q9HBW1 653 aa14.38□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 KCNJ18B7U540 433 aa14.38□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 GNA14O95837 355 aa14.38□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 KCNJ12Q14500 433 aa14.38□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 TSC22D1Q15714 1073 aa14.38□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 NRBP2Q9NSY0 501 aa14.38□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 PCDHA1Q9Y5I3 950 aa14.38□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 SAR1BQ9Y6B6 198 aa14.38□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 ZNF263O14978 683 aa14.38□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 TUBB4AP04350 444 aa14.38□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 CTSWP56202 376 aa14.38□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 CDO1Q16878 200 aa14.38□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 BTN2A2Q8WVV5 523 aa14.38□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 SCARA5Q6ZMJ2 495 aa14.38□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 MCF2L2Q86YR7 1114 aa14.38□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 ANKRD13CQ8N6S4 541 aa14.38□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.38□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 EIF2AQ9BY44 585 aaKnown RBP14.38□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 IQGAP2Q13576 1575 aa14.38□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 SERPINI2O75830 405 aa14.38□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 ATL3Q6DD88 541 aa14.38□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 SPATS2LQ9NUQ6 558 aaKnown RBP14.38□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 CD58P19256 250 aa14.38□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 NSFP46459 744 aaKnown RBP14.38□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 SLMAPQ14BN4 828 aa14.38□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 COG4Q9H9E3 785 aa14.38□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 ATP8A2Q9NTI2 1148 aa14.38□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 KCNG1Q9UIX4 513 aa14.38□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 NPATQ14207 1427 aa14.37□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 MORC3Q14149 939 aa14.37□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 PPP2R5EQ16537 467 aa14.37□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 FRMD3A2A2Y4 597 aa14.37□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 OSBPP22059 807 aa14.37□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 ZNF827Q17R98 1081 aa14.37□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 MAP3K21Q5TCX8 1036 aa14.37□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 RNF219Q5W0B1 726 aaPredicted RBP14.37□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 SLFN12Q8IYM2 578 aa14.37□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 RNF168Q8IYW5 571 aaPredicted RBP14.37□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 RETREG2Q8NC44 543 aa14.37□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 ZNF577Q9BSK1 485 aa14.37□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 FAM49AQ9H0Q0 323 aaPredicted RBP14.37□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 TBK1Q9UHD2 729 aa14.37□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 E7EWF7 191 aa14.37□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 BTDP43251 543 aa14.37□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 PSMD2Q13200 908 aa14.37□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 ADALQ6DHV7 355 aa14.37□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 MYH11P35749 1972 aa14.37□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 SKOR1P84550 965 aa14.37□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 ADAM9Q13443 819 aa14.37□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 LARSQ9P2J5 1176 aaKnown RBP14.37□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 MAP3K19Q56UN5 1328 aa14.37□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 WDR91A4D1P6 747 aa14.37□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 KRT87PA6NCN2 255 aa14.37□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 SART1O43290 800 aaKnown RBP14.37□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 TBC1D12O60347 775 aa14.37□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 PTK2Q05397 1052 aa14.37□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 CYP4F22Q6NT55 531 aa14.37□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 BLIDQ8IZY5 108 aa14.37□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 KDM2BQ8NHM5 1336 aa14.37□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 MTMR3Q13615 1198 aa14.37□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 KBTBD3Q8NAB2 608 aa14.37□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 CCNA1P78396 465 aa14.36□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 GRK7Q8WTQ7 553 aa14.36□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 ASXL1Q8IXJ9 1541 aa14.36□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 EVI5O60447 810 aa14.36□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 TRPA1O75762 1119 aa14.36□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 GDF11O95390 407 aa14.36□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 SRGAP2BP0DMP2 458 aa14.36□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 THOC5Q13769 683 aaKnown RBP14.36□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 LRRC8CQ8TDW0 803 aa14.36□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.36□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 SNX14Q9Y5W7 946 aa14.36□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 RIMS2Q9UQ26 1411 aa14.36□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 SLFN13Q68D06 897 aa14.36□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 SCYL3Q8IZE3 742 aa14.36□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 SLC7A3Q8WY07 619 aa14.36□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 ANXA13P27216 316 aa14.36□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 CACNB1Q02641 598 aaPredicted RBP14.36□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 ZSCAN10Q96SZ4 725 aaPredicted RBP14.36□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 PPP1R9AQ9ULJ8 1098 aa14.36□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 SYNJ1O43426 1573 aa14.36□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 MEIS1O00470 390 aa14.36□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 SLC16A2P36021 539 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms