RNA–Protein interactions for RNA: ENST00000471427.1

POLR1A-206, Transcript of RNA polymerase I subunit A, humanhuman

TSL 2

Gene POLR1A, Length 290 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1A-206ENST00000471427 STXBP2Q15833 593 aa11.16□□□□□ -0.62
POLR1A-206ENST00000471427 TSGA10IPQ3SY00 556 aa11.16□□□□□ -0.62
POLR1A-206ENST00000471427 BRDTQ58F21 947 aaPredicted RBP11.16□□□□□ -0.62
POLR1A-206ENST00000471427 TMEM67Q5HYA8 995 aa11.16□□□□□ -0.62
POLR1A-206ENST00000471427 MFSD5Q6N075 450 aa11.16□□□□□ -0.62
POLR1A-206ENST00000471427 CATIPQ7Z7H3 387 aa11.16□□□□□ -0.62
POLR1A-206ENST00000471427 TMEM87BQ96K49 555 aa11.16□□□□□ -0.62
POLR1A-206ENST00000471427 RMDN3Q96TC7 470 aa11.16□□□□□ -0.62
POLR1A-206ENST00000471427 LZTS2Q9BRK4 669 aa11.16□□□□□ -0.62
POLR1A-206ENST00000471427 SENP2Q9HC62 589 aa11.16□□□□□ -0.62
POLR1A-206ENST00000471427 PCDHA1Q9Y5I3 950 aa11.16□□□□□ -0.62
POLR1A-206ENST00000471427 OPLAHO14841 1288 aa11.15□□□□□ -0.62
POLR1A-206ENST00000471427 SLC27A2O14975 620 aa11.15□□□□□ -0.62
POLR1A-206ENST00000471427 PPP1R11O60927 126 aaPredicted RBP11.15□□□□□ -0.62
POLR1A-206ENST00000471427 MCM5P33992 734 aa11.15□□□□□ -0.62
POLR1A-206ENST00000471427 SLC35G1Q2M3R5 365 aa11.15□□□□□ -0.62
POLR1A-206ENST00000471427 C9orf50Q5SZB4 431 aa11.15□□□□□ -0.62
POLR1A-206ENST00000471427 LY9Q9HBG7 655 aa11.15□□□□□ -0.62
POLR1A-206ENST00000471427 COL20A1Q9P218 1284 aa11.15□□□□□ -0.62
POLR1A-206ENST00000471427 LCTP09848 1927 aa11.15□□□□□ -0.62
POLR1A-206ENST00000471427 DDAH1O94760 285 aa11.14□□□□□ -0.63
POLR1A-206ENST00000471427 NR3C2P08235 984 aa11.14□□□□□ -0.63
POLR1A-206ENST00000471427 TXNP10599 105 aaKnown RBP11.14□□□□□ -0.63
POLR1A-206ENST00000471427 TGFB3P10600 412 aa11.14□□□□□ -0.63
POLR1A-206ENST00000471427 KIF5BP33176 963 aa11.14□□□□□ -0.63
POLR1A-206ENST00000471427 GNAQP50148 359 aa11.14□□□□□ -0.63
POLR1A-206ENST00000471427 SMAD3P84022 425 aaKnown RBP11.14□□□□□ -0.63
POLR1A-206ENST00000471427 PURAQ00577 322 aaKnown RBP11.14□□□□□ -0.63
POLR1A-206ENST00000471427 FPGSQ05932 587 aa11.14□□□□□ -0.63
POLR1A-206ENST00000471427 PPP2R5BQ15173 497 aa11.14□□□□□ -0.63
POLR1A-206ENST00000471427 ARHGEF16Q5VV41 709 aa11.14□□□□□ -0.63
POLR1A-206ENST00000471427 CREB3L3Q68CJ9 461 aa11.14□□□□□ -0.63
POLR1A-206ENST00000471427 CASC1Q6TDU7 716 aa11.14□□□□□ -0.63
POLR1A-206ENST00000471427 CHST3Q7LGC8 479 aa11.14□□□□□ -0.63
POLR1A-206ENST00000471427 VSIG10LQ86VR7 867 aa11.14□□□□□ -0.63
POLR1A-206ENST00000471427 TMEM199Q8N511 208 aa11.14□□□□□ -0.63
POLR1A-206ENST00000471427 OR6J1Q8NGC5 347 aa11.14□□□□□ -0.63
POLR1A-206ENST00000471427 EMID1Q96A84 441 aaPredicted RBP11.14□□□□□ -0.63
POLR1A-206ENST00000471427 PIGSQ96S52 555 aa11.14□□□□□ -0.63
POLR1A-206ENST00000471427 MTG1Q9BT17 334 aaPredicted RBP11.14□□□□□ -0.63
POLR1A-206ENST00000471427 SPZ1Q9BXG8 430 aa11.14□□□□□ -0.63
POLR1A-206ENST00000471427 PXMP2Q9NR77 195 aa11.14□□□□□ -0.63
POLR1A-206ENST00000471427 COL6A3P12111 3177 aa11.14□□□□□ -0.63
POLR1A-206ENST00000471427 GCOM1H8Y6P7 765 aaPredicted RBP11.13□□□□□ -0.63
POLR1A-206ENST00000471427 PRC1O43663 620 aa11.13□□□□□ -0.63
POLR1A-206ENST00000471427 CFBP00751 764 aa11.13□□□□□ -0.63
POLR1A-206ENST00000471427 SUPT20HL2P0C7V6 817 aa11.13□□□□□ -0.63
POLR1A-206ENST00000471427 POLR2MP0CAP2 368 aa11.13□□□□□ -0.63
POLR1A-206ENST00000471427 CALM1P0DP23 149 aa11.13□□□□□ -0.63
POLR1A-206ENST00000471427 CALM2P0DP24 149 aa11.13□□□□□ -0.63
POLR1A-206ENST00000471427 CALM3P0DP25 149 aa11.13□□□□□ -0.63
POLR1A-206ENST00000471427 PTGS1P23219 599 aa11.13□□□□□ -0.63
POLR1A-206ENST00000471427 EPHB4P54760 987 aa11.13□□□□□ -0.63
POLR1A-206ENST00000471427 PTPN11Q06124 597 aaPredicted RBP11.13□□□□□ -0.63
POLR1A-206ENST00000471427 PPIGQ13427 754 aaKnown RBP eCLIP11.13□□□□□ -0.63
POLR1A-206ENST00000471427 RNF20Q5VTR2 975 aa11.13□□□□□ -0.63
POLR1A-206ENST00000471427 NFRKBQ6P4R8 1299 aa11.13□□□□□ -0.63
POLR1A-206ENST00000471427 KCNV1Q6PIU1 500 aa11.13□□□□□ -0.63
POLR1A-206ENST00000471427 C16orf59Q7L2K0 433 aa11.13□□□□□ -0.63
POLR1A-206ENST00000471427 SGMS1Q86VZ5 419 aa11.13□□□□□ -0.63
POLR1A-206ENST00000471427 ZNF654Q8IZM8 581 aa11.13□□□□□ -0.63
POLR1A-206ENST00000471427 DEFB123Q8N688 67 aa11.13□□□□□ -0.63
POLR1A-206ENST00000471427 CTCFLQ8NI51 663 aaPredicted RBP11.13□□□□□ -0.63
POLR1A-206ENST00000471427 GPHNQ9NQX3 736 aaPredicted RBP11.13□□□□□ -0.63
POLR1A-206ENST00000471427 MTMR10Q9NXD2 777 aa11.13□□□□□ -0.63
POLR1A-206ENST00000471427 DDX41Q9UJV9 622 aaKnown RBP11.13□□□□□ -0.63
POLR1A-206ENST00000471427 LTBP2Q14767 1821 aa11.13□□□□□ -0.63
POLR1A-206ENST00000471427 BAZ2BQ9UIF8 2168 aaKnown RBP11.13□□□□□ -0.63
POLR1A-206ENST00000471427 SH2B2O14492 632 aaPredicted RBP11.12□□□□□ -0.63
POLR1A-206ENST00000471427 B4GALT4O60513 344 aa11.12□□□□□ -0.63
POLR1A-206ENST00000471427 ARIH2O95376 493 aa11.12□□□□□ -0.63
POLR1A-206ENST00000471427 GH1P01241 217 aa11.12□□□□□ -0.63
POLR1A-206ENST00000471427 LAMC2Q13753 1193 aa11.12□□□□□ -0.63
POLR1A-206ENST00000471427 RASIP1Q5U651 963 aa11.12□□□□□ -0.63
POLR1A-206ENST00000471427 SEPT14Q6ZU15 432 aa11.12□□□□□ -0.63
POLR1A-206ENST00000471427 COPS5Q92905 334 aa11.12□□□□□ -0.63
POLR1A-206ENST00000471427 PDCD2LQ9BRP1 358 aa11.12□□□□□ -0.63
POLR1A-206ENST00000471427 ALDH8A1Q9H2A2 487 aaPredicted RBP11.12□□□□□ -0.63
POLR1A-206ENST00000471427 ANO2Q9NQ90 1003 aa11.12□□□□□ -0.63
POLR1A-206ENST00000471427 STXBP5LQ9Y2K9 1186 aa11.12□□□□□ -0.63
POLR1A-206ENST00000471427 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.11□□□□□ -0.63
POLR1A-206ENST00000471427 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.11□□□□□ -0.63
POLR1A-206ENST00000471427 CCDC69A6NI79 296 aa11.11□□□□□ -0.63
POLR1A-206ENST00000471427 PIK3CDO00329 1044 aa11.11□□□□□ -0.63
POLR1A-206ENST00000471427 PPFIA4O75335 1185 aa11.11□□□□□ -0.63
POLR1A-206ENST00000471427 STAM2O75886 525 aa11.11□□□□□ -0.63
POLR1A-206ENST00000471427 RGS20O76081 388 aa11.11□□□□□ -0.63
POLR1A-206ENST00000471427 MYL3P08590 195 aa11.11□□□□□ -0.63
POLR1A-206ENST00000471427 HOXD8P13378 290 aaPredicted RBP11.11□□□□□ -0.63
POLR1A-206ENST00000471427 CASTP20810 708 aaKnown RBP11.11□□□□□ -0.63
POLR1A-206ENST00000471427 PSMC6P62333 389 aa11.11□□□□□ -0.63
POLR1A-206ENST00000471427 EXOSC10Q01780 885 aaKnown RBP11.11□□□□□ -0.63
POLR1A-206ENST00000471427 ARHGAP1Q07960 439 aa11.11□□□□□ -0.63
POLR1A-206ENST00000471427 PGM5Q15124 567 aa11.11□□□□□ -0.63
POLR1A-206ENST00000471427 LY6KQ17RY6 165 aa11.11□□□□□ -0.63
POLR1A-206ENST00000471427 NBPF20Q3BBV1 942 aa11.11□□□□□ -0.63
POLR1A-206ENST00000471427 TMEM240Q5SV17 173 aa11.11□□□□□ -0.63
POLR1A-206ENST00000471427 SESTD1Q86VW0 696 aa11.11□□□□□ -0.63
POLR1A-206ENST00000471427 HOMER1Q86YM7 354 aa11.11□□□□□ -0.63
POLR1A-206ENST00000471427 TEX2Q8IWB9 1127 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms