RNA–Protein interactions for RNA: ENST00000471423.1

VPS72-204, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 2

Gene VPS72, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-204ENST00000471423 RNF26Q9BY78 433 aaPredicted RBP20.42■□□□□ 0.86
VPS72-204ENST00000471423 OGDHLQ9ULD0 1010 aa20.42■□□□□ 0.86
VPS72-204ENST00000471423 AKAP17AQ02040 695 aaKnown RBP20.41■□□□□ 0.86
VPS72-204ENST00000471423 PKN1Q16512 942 aa20.41■□□□□ 0.86
VPS72-204ENST00000471423 CCDC144BQ3MJ40 725 aa20.41■□□□□ 0.86
VPS72-204ENST00000471423 ARHGEF16Q5VV41 709 aa20.41■□□□□ 0.86
VPS72-204ENST00000471423 PPP1R18Q6NYC8 613 aa20.41■□□□□ 0.86
VPS72-204ENST00000471423 USP17L6PQ6QN14 398 aa20.41■□□□□ 0.86
VPS72-204ENST00000471423 CUL5Q93034 780 aa20.41■□□□□ 0.86
VPS72-204ENST00000471423 PSTPIP2Q9H939 334 aa20.41■□□□□ 0.86
VPS72-204ENST00000471423 VTA1Q9NP79 307 aa20.41■□□□□ 0.86
VPS72-204ENST00000471423 PXMP2Q9NR77 195 aa20.41■□□□□ 0.86
VPS72-204ENST00000471423 BARHL2Q9NY43 387 aa20.41■□□□□ 0.86
VPS72-204ENST00000471423 RBM27Q9P2N5 1060 aaKnown RBP20.41■□□□□ 0.86
VPS72-204ENST00000471423 FAM184BQ9ULE4 1060 aa20.41■□□□□ 0.86
VPS72-204ENST00000471423 B4DLN1 442 aa20.4■□□□□ 0.86
VPS72-204ENST00000471423 MEIS2O14770 477 aa20.4■□□□□ 0.86
VPS72-204ENST00000471423 RARBP10826 455 aa20.4■□□□□ 0.86
VPS72-204ENST00000471423 RGS19P49795 217 aa20.4■□□□□ 0.86
VPS72-204ENST00000471423 MRPL12P52815 198 aaKnown RBP20.4■□□□□ 0.86
VPS72-204ENST00000471423 ME3Q16798 604 aa20.4■□□□□ 0.86
VPS72-204ENST00000471423 CPLX2Q6PUV4 134 aaKnown RBP20.4■□□□□ 0.86
VPS72-204ENST00000471423 SMARCC2Q8TAQ2 1214 aa20.4■□□□□ 0.86
VPS72-204ENST00000471423 PIK3CDO00329 1044 aa20.39■□□□□ 0.85
VPS72-204ENST00000471423 ADCY6O43306 1168 aa20.39■□□□□ 0.85
VPS72-204ENST00000471423 FARP2O94887 1054 aaPredicted RBP20.39■□□□□ 0.85
VPS72-204ENST00000471423 ADCYAP1R1P41586 468 aa20.39■□□□□ 0.85
VPS72-204ENST00000471423 SSRP1Q08945 709 aaKnown RBP20.39■□□□□ 0.85
VPS72-204ENST00000471423 RABEP1Q15276 862 aa20.39■□□□□ 0.85
VPS72-204ENST00000471423 UBE2SQ16763 222 aa20.39■□□□□ 0.85
VPS72-204ENST00000471423 TAPT1Q6NXT6 567 aa20.39■□□□□ 0.85
VPS72-204ENST00000471423 TRIM22Q8IYM9 498 aa20.39■□□□□ 0.85
VPS72-204ENST00000471423 NECAB1Q8N987 351 aa20.39■□□□□ 0.85
VPS72-204ENST00000471423 PDGFCQ9NRA1 345 aa20.39■□□□□ 0.85
VPS72-204ENST00000471423 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.38■□□□□ 0.85
VPS72-204ENST00000471423 CAPN2P17655 700 aa20.38■□□□□ 0.85
VPS72-204ENST00000471423 ANKLE1Q8NAG6 615 aa20.38■□□□□ 0.85
VPS72-204ENST00000471423 IL31RAQ8NI17 732 aa20.38■□□□□ 0.85
VPS72-204ENST00000471423 DIS3LQ8TF46 1054 aaKnown RBP20.38■□□□□ 0.85
VPS72-204ENST00000471423 GTF3C6Q969F1 213 aa20.38■□□□□ 0.85
VPS72-204ENST00000471423 IWS1Q96ST2 819 aa20.38■□□□□ 0.85
VPS72-204ENST00000471423 PDCD2LQ9BRP1 358 aa20.38■□□□□ 0.85
VPS72-204ENST00000471423 XPNPEP3Q9NQH7 507 aa20.38■□□□□ 0.85
VPS72-204ENST00000471423 DTNBO60941 627 aa20.37■□□□□ 0.85
VPS72-204ENST00000471423 CDKL5O76039 1030 aa20.37■□□□□ 0.85
VPS72-204ENST00000471423 NR3C2P08235 984 aa20.37■□□□□ 0.85
VPS72-204ENST00000471423 MNX1P50219 401 aaPredicted RBP20.37■□□□□ 0.85
VPS72-204ENST00000471423 ADCY7P51828 1080 aa20.37■□□□□ 0.85
VPS72-204ENST00000471423 PGM5Q15124 567 aa20.37■□□□□ 0.85
VPS72-204ENST00000471423 STXBP2Q15833 593 aa20.37■□□□□ 0.85
VPS72-204ENST00000471423 RIC8AQ9NPQ8 531 aa20.37■□□□□ 0.85
VPS72-204ENST00000471423 FRMPD4Q14CM0 1322 aa20.36■□□□□ 0.85
VPS72-204ENST00000471423 SYNRGQ9UMZ2 1314 aa20.36■□□□□ 0.85
VPS72-204ENST00000471423 SMCO2A6NFE2 343 aa20.36■□□□□ 0.85
VPS72-204ENST00000471423 CTDNEP1O95476 244 aa20.36■□□□□ 0.85
VPS72-204ENST00000471423 PGK1P00558 417 aa20.36■□□□□ 0.85
VPS72-204ENST00000471423 MYCNP04198 464 aaPredicted RBP20.36■□□□□ 0.85
VPS72-204ENST00000471423 MYCLP12524 364 aaPredicted RBP20.36■□□□□ 0.85
VPS72-204ENST00000471423 TNFAIP2Q03169 654 aa20.36■□□□□ 0.85
VPS72-204ENST00000471423 UBE2Q1Q7Z7E8 422 aa20.36■□□□□ 0.85
VPS72-204ENST00000471423 VPS54Q9P1Q0 977 aa20.36■□□□□ 0.85
VPS72-204ENST00000471423 LIMCH1Q9UPQ0 1083 aa20.36■□□□□ 0.85
VPS72-204ENST00000471423 DUSP11O75319 330 aaKnown RBP20.35■□□□□ 0.85
VPS72-204ENST00000471423 DEXIO95424 95 aa20.35■□□□□ 0.85
VPS72-204ENST00000471423 SMPD1P17405 629 aa20.35■□□□□ 0.85
VPS72-204ENST00000471423 PTGS1P23219 599 aa20.35■□□□□ 0.85
VPS72-204ENST00000471423 TMEM63BQ5T3F8 832 aa20.35■□□□□ 0.85
VPS72-204ENST00000471423 GJC2Q5T442 439 aaPredicted RBP20.35■□□□□ 0.85
VPS72-204ENST00000471423 CCDC12Q8WUD4 166 aaPredicted RBP20.35■□□□□ 0.85
VPS72-204ENST00000471423 PAWRQ96IZ0 340 aaKnown RBP20.35■□□□□ 0.85
VPS72-204ENST00000471423 STK36Q9NRP7 1315 aa20.34■□□□□ 0.85
VPS72-204ENST00000471423 RBM47A0AV96 593 aaKnown RBP20.34■□□□□ 0.85
VPS72-204ENST00000471423 ESYT2A0FGR8 921 aa20.34■□□□□ 0.85
VPS72-204ENST00000471423 SPDYE3A6NKU9 549 aa20.34■□□□□ 0.85
VPS72-204ENST00000471423 ST18O60284 1047 aa20.34■□□□□ 0.85
VPS72-204ENST00000471423 ADAMTS4O75173 837 aa20.34■□□□□ 0.85
VPS72-204ENST00000471423 CCND2P30279 289 aa20.34■□□□□ 0.85
VPS72-204ENST00000471423 ST3GAL1Q11201 340 aa20.34■□□□□ 0.85
VPS72-204ENST00000471423 LRRC41Q15345 812 aa20.34■□□□□ 0.85
VPS72-204ENST00000471423 IQSEC1Q6DN90 963 aa20.34■□□□□ 0.85
VPS72-204ENST00000471423 SEPT14Q6ZU15 432 aa20.34■□□□□ 0.85
VPS72-204ENST00000471423 ARRDC4Q8NCT1 418 aa20.34■□□□□ 0.85
VPS72-204ENST00000471423 ZFP91Q96JP5 570 aaPredicted RBP20.34■□□□□ 0.85
VPS72-204ENST00000471423 AIFM3Q96NN9 605 aa20.34■□□□□ 0.85
VPS72-204ENST00000471423 WDR11Q9BZH6 1224 aa20.34■□□□□ 0.85
VPS72-204ENST00000471423 GNEQ9Y223 722 aaKnown RBP20.34■□□□□ 0.85
VPS72-204ENST00000471423 KBTBD13C9JR72 458 aa20.33■□□□□ 0.85
VPS72-204ENST00000471423 DNM1LO00429 736 aa20.33■□□□□ 0.85
VPS72-204ENST00000471423 EIF3JO75822 258 aaKnown RBP20.33■□□□□ 0.85
VPS72-204ENST00000471423 IRX5P78411 483 aaPredicted RBP20.33■□□□□ 0.85
VPS72-204ENST00000471423 MLLT1Q03111 559 aaPredicted RBP20.33■□□□□ 0.85
VPS72-204ENST00000471423 TLK2Q86UE8 772 aa20.33■□□□□ 0.85
VPS72-204ENST00000471423 VSIG10LQ86VR7 867 aa20.33■□□□□ 0.85
VPS72-204ENST00000471423 CCDC148Q8NFR7 591 aa20.33■□□□□ 0.85
VPS72-204ENST00000471423 SCFD2Q8WU76 684 aa20.33■□□□□ 0.85
VPS72-204ENST00000471423 ZMYND12Q9H0C1 365 aa20.33■□□□□ 0.85
VPS72-204ENST00000471423 GLT8D2Q9H1C3 349 aa20.33■□□□□ 0.85
VPS72-204ENST00000471423 PCDHA6Q9UN73 950 aa20.33■□□□□ 0.85
VPS72-204ENST00000471423 PCDHA8Q9Y5H6 950 aa20.33■□□□□ 0.85
VPS72-204ENST00000471423 KIAA1217Q5T5P2 1943 aa20.33■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms