RNA–Protein interactions for RNA: ENST00000471226.5

ABCF3-208, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 5

Gene ABCF3, Length 650 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-208ENST00000471226 PXMP2Q9NR77 195 aa17.51■□□□□ 0.39
ABCF3-208ENST00000471226 V9GY48 417 aaPredicted RBP17.51■□□□□ 0.39
ABCF3-208ENST00000471226 SYNRGQ9UMZ2 1314 aa17.5■□□□□ 0.39
ABCF3-208ENST00000471226 PIK3CDO00329 1044 aa17.5■□□□□ 0.39
ABCF3-208ENST00000471226 MEIS2O14770 477 aa17.5■□□□□ 0.39
ABCF3-208ENST00000471226 PGK1P00558 417 aa17.5■□□□□ 0.39
ABCF3-208ENST00000471226 NKX3-2P78367 333 aa17.5■□□□□ 0.39
ABCF3-208ENST00000471226 TNFAIP2Q03169 654 aa17.5■□□□□ 0.39
ABCF3-208ENST00000471226 ARHGEF16Q5VV41 709 aa17.5■□□□□ 0.39
ABCF3-208ENST00000471226 KLHDC9Q8NEP7 349 aa17.5■□□□□ 0.39
ABCF3-208ENST00000471226 UPF3AQ9H1J1 476 aaKnown RBP17.5■□□□□ 0.39
ABCF3-208ENST00000471226 GNEQ9Y223 722 aaKnown RBP17.5■□□□□ 0.39
ABCF3-208ENST00000471226 GTF3C3Q9Y5Q9 886 aa17.5■□□□□ 0.39
ABCF3-208ENST00000471226 MYH7BA7E2Y1 1941 aa17.5■□□□□ 0.39
ABCF3-208ENST00000471226 hCG_1984214I3L0E3 225 aa17.49■□□□□ 0.39
ABCF3-208ENST00000471226 SMPD1P17405 629 aa17.49■□□□□ 0.39
ABCF3-208ENST00000471226 GJA9P57773 515 aa17.49■□□□□ 0.39
ABCF3-208ENST00000471226 WWC2Q6AWC2 1192 aa17.49■□□□□ 0.39
ABCF3-208ENST00000471226 RNF180Q86T96 592 aa17.49■□□□□ 0.39
ABCF3-208ENST00000471226 ZNF713Q8N859 430 aaPredicted RBP17.49■□□□□ 0.39
ABCF3-208ENST00000471226 GPKOWQ92917 476 aaPredicted RBP eCLIP17.49■□□□□ 0.39
ABCF3-208ENST00000471226 PDCD2LQ9BRP1 358 aa17.49■□□□□ 0.39
ABCF3-208ENST00000471226 LARP6Q9BRS8 491 aaKnown RBP17.49■□□□□ 0.39
ABCF3-208ENST00000471226 KBTBD13C9JR72 458 aa17.48■□□□□ 0.39
ABCF3-208ENST00000471226 PRPF3O43395 683 aaKnown RBP17.48■□□□□ 0.39
ABCF3-208ENST00000471226 NR3C2P08235 984 aa17.48■□□□□ 0.39
ABCF3-208ENST00000471226 IFNAR1P17181 557 aa17.48■□□□□ 0.39
ABCF3-208ENST00000471226 EIF2AK2P19525 551 aaKnown RBP17.48■□□□□ 0.39
ABCF3-208ENST00000471226 CST5P28325 142 aaPredicted RBP17.48■□□□□ 0.39
ABCF3-208ENST00000471226 CCT2P78371 535 aaKnown RBP17.48■□□□□ 0.39
ABCF3-208ENST00000471226 STXBP2Q15833 593 aa17.48■□□□□ 0.39
ABCF3-208ENST00000471226 TMEM63BQ5T3F8 832 aa17.48■□□□□ 0.39
ABCF3-208ENST00000471226 CCSAPQ6IQ19 270 aaPredicted RBP17.48■□□□□ 0.39
ABCF3-208ENST00000471226 TYW1BQ6NUM6 668 aa17.48■□□□□ 0.39
ABCF3-208ENST00000471226 USP17L6PQ6QN14 398 aa17.48■□□□□ 0.39
ABCF3-208ENST00000471226 HEATR3Q7Z4Q2 680 aa17.48■□□□□ 0.39
ABCF3-208ENST00000471226 TSEN34Q9BSV6 310 aaKnown RBP17.48■□□□□ 0.39
ABCF3-208ENST00000471226 WDR11Q9BZH6 1224 aa17.48■□□□□ 0.39
ABCF3-208ENST00000471226 PSTPIP2Q9H939 334 aa17.48■□□□□ 0.39
ABCF3-208ENST00000471226 NCOA5Q9HCD5 579 aaKnown RBP17.48■□□□□ 0.39
ABCF3-208ENST00000471226 PHF24Q9UPV7 400 aa17.48■□□□□ 0.39
ABCF3-208ENST00000471226 Q9Y3F1 56 aa17.48■□□□□ 0.39
ABCF3-208ENST00000471226 CEP290O15078 2479 aa17.48■□□□□ 0.39
ABCF3-208ENST00000471226 FRMPD4Q14CM0 1322 aa17.47■□□□□ 0.39
ABCF3-208ENST00000471226 MYADML2A6NDP7 307 aa17.47■□□□□ 0.39
ABCF3-208ENST00000471226 CTAGE5O15320 804 aa17.47■□□□□ 0.39
ABCF3-208ENST00000471226 AK2P54819 239 aa17.47■□□□□ 0.39
ABCF3-208ENST00000471226 PGM5Q15124 567 aa17.47■□□□□ 0.39
ABCF3-208ENST00000471226 ANKRD1Q15327 319 aa17.47■□□□□ 0.39
ABCF3-208ENST00000471226 PKN1Q16512 942 aa17.47■□□□□ 0.39
ABCF3-208ENST00000471226 PFKFB3Q16875 520 aaPredicted RBP17.47■□□□□ 0.39
ABCF3-208ENST00000471226 DUSP28Q4G0W2 176 aa17.47■□□□□ 0.39
ABCF3-208ENST00000471226 PPP1R18Q6NYC8 613 aa17.47■□□□□ 0.39
ABCF3-208ENST00000471226 VSIG10LQ86VR7 867 aa17.47■□□□□ 0.39
ABCF3-208ENST00000471226 FCHSD1Q86WN1 690 aa17.47■□□□□ 0.39
ABCF3-208ENST00000471226 SCFD2Q8WU76 684 aa17.47■□□□□ 0.39
ABCF3-208ENST00000471226 CUL5Q93034 780 aa17.47■□□□□ 0.39
ABCF3-208ENST00000471226 RNF26Q9BY78 433 aaPredicted RBP17.47■□□□□ 0.39
ABCF3-208ENST00000471226 SENP6Q9GZR1 1112 aaPredicted RBP17.47■□□□□ 0.39
ABCF3-208ENST00000471226 BARHL2Q9NY43 387 aa17.47■□□□□ 0.39
ABCF3-208ENST00000471226 RBM27Q9P2N5 1060 aaKnown RBP17.47■□□□□ 0.39
ABCF3-208ENST00000471226 TPCN1Q9ULQ1 816 aa17.47■□□□□ 0.39
ABCF3-208ENST00000471226 STXBP3O00186 592 aa17.46■□□□□ 0.39
ABCF3-208ENST00000471226 EIF3JO75822 258 aaKnown RBP17.46■□□□□ 0.39
ABCF3-208ENST00000471226 MYCNP04198 464 aaPredicted RBP17.46■□□□□ 0.39
ABCF3-208ENST00000471226 IRX5P78411 483 aaPredicted RBP17.46■□□□□ 0.39
ABCF3-208ENST00000471226 CCDC62Q6P9F0 684 aa17.46■□□□□ 0.39
ABCF3-208ENST00000471226 TEX2Q8IWB9 1127 aa17.46■□□□□ 0.39
ABCF3-208ENST00000471226 SMARCC2Q8TAQ2 1214 aa17.46■□□□□ 0.39
ABCF3-208ENST00000471226 PHKBQ93100 1093 aa17.46■□□□□ 0.39
ABCF3-208ENST00000471226 SPC25Q9HBM1 224 aa17.46■□□□□ 0.39
ABCF3-208ENST00000471226 DNAH12Q6ZR08 3092 aa17.45■□□□□ 0.38
ABCF3-208ENST00000471226 NKRFO15226 690 aaKnown RBP eCLIP17.45■□□□□ 0.38
ABCF3-208ENST00000471226 ARIH2O95376 493 aa17.45■□□□□ 0.38
ABCF3-208ENST00000471226 C6orf222P0C671 652 aaPredicted RBP17.45■□□□□ 0.38
ABCF3-208ENST00000471226 SCG2P13521 617 aa17.45■□□□□ 0.38
ABCF3-208ENST00000471226 PTGS1P23219 599 aa17.45■□□□□ 0.38
ABCF3-208ENST00000471226 RBM25P49756 843 aaKnown RBP17.45■□□□□ 0.38
ABCF3-208ENST00000471226 NEK4P51957 841 aa17.45■□□□□ 0.38
ABCF3-208ENST00000471226 NAPAP54920 295 aa17.45■□□□□ 0.38
ABCF3-208ENST00000471226 STK3Q13188 491 aa17.45■□□□□ 0.38
ABCF3-208ENST00000471226 KCNA10Q16322 511 aa17.45■□□□□ 0.38
ABCF3-208ENST00000471226 NOL8Q76FK4 1167 aaKnown RBP17.45■□□□□ 0.38
ABCF3-208ENST00000471226 TLK2Q86UE8 772 aa17.45■□□□□ 0.38
ABCF3-208ENST00000471226 IL31RAQ8NI17 732 aa17.45■□□□□ 0.38
ABCF3-208ENST00000471226 DPF3Q92784 378 aa17.45■□□□□ 0.38
ABCF3-208ENST00000471226 KIF2CQ99661 725 aa17.45■□□□□ 0.38
ABCF3-208ENST00000471226 C22orf23Q9BZE7 217 aa17.45■□□□□ 0.38
ABCF3-208ENST00000471226 RIC8AQ9NPQ8 531 aa17.45■□□□□ 0.38
ABCF3-208ENST00000471226 MOXD2PA6NHM9 499 aa17.44■□□□□ 0.38
ABCF3-208ENST00000471226 DYNC1LI2O43237 492 aaPredicted RBP17.44■□□□□ 0.38
ABCF3-208ENST00000471226 PFKFB2O60825 505 aa17.44■□□□□ 0.38
ABCF3-208ENST00000471226 RGS20O76081 388 aa17.44■□□□□ 0.38
ABCF3-208ENST00000471226 TXNP10599 105 aaKnown RBP17.44■□□□□ 0.38
ABCF3-208ENST00000471226 MYCLP12524 364 aaPredicted RBP17.44■□□□□ 0.38
ABCF3-208ENST00000471226 ACLYP53396 1101 aa17.44■□□□□ 0.38
ABCF3-208ENST00000471226 TTLL4Q14679 1199 aa17.44■□□□□ 0.38
ABCF3-208ENST00000471226 LRRC26Q2I0M4 334 aa17.44■□□□□ 0.38
ABCF3-208ENST00000471226 SEPT14Q6ZU15 432 aa17.44■□□□□ 0.38
ABCF3-208ENST00000471226 PCSK9Q8NBP7 692 aaKnown RBP17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms