RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 RFC2P35250 354 aa10.62□□□□□ -0.71
SF3A1-206ENST00000471037 SLC16A2P36021 539 aa10.62□□□□□ -0.71
SF3A1-206ENST00000471037 RABGGTBP53611 331 aa10.62□□□□□ -0.71
SF3A1-206ENST00000471037 PTPN11Q06124 597 aaPredicted RBP10.62□□□□□ -0.71
SF3A1-206ENST00000471037 NMIQ13287 307 aaPredicted RBP10.62□□□□□ -0.71
SF3A1-206ENST00000471037 TTLL4Q14679 1199 aa10.62□□□□□ -0.71
SF3A1-206ENST00000471037 CCDC85BQ15834 202 aaPredicted RBP10.62□□□□□ -0.71
SF3A1-206ENST00000471037 CWC27Q6UX04 472 aaKnown RBP10.62□□□□□ -0.71
SF3A1-206ENST00000471037 SLC30A10Q6XR72 485 aa10.62□□□□□ -0.71
SF3A1-206ENST00000471037 DNERQ8NFT8 737 aa10.62□□□□□ -0.71
SF3A1-206ENST00000471037 CLEC4DQ8WXI8 215 aa10.62□□□□□ -0.71
SF3A1-206ENST00000471037 UHRF1Q96T88 793 aaPredicted RBP10.62□□□□□ -0.71
SF3A1-206ENST00000471037 MPHOSPH6Q99547 160 aaKnown RBP10.62□□□□□ -0.71
SF3A1-206ENST00000471037 MTG1Q9BT17 334 aaPredicted RBP10.62□□□□□ -0.71
SF3A1-206ENST00000471037 TSPYL2Q9H2G4 693 aaPredicted RBP10.62□□□□□ -0.71
SF3A1-206ENST00000471037 CHD7Q9P2D1 2997 aa10.62□□□□□ -0.71
SF3A1-206ENST00000471037 MTMR7Q9Y216 660 aa10.62□□□□□ -0.71
SF3A1-206ENST00000471037 SCN10AQ9Y5Y9 1956 aa10.62□□□□□ -0.71
SF3A1-206ENST00000471037 TANC1Q9C0D5 1861 aa10.61□□□□□ -0.71
SF3A1-206ENST00000471037 A0A0D9SFI3 127 aa10.61□□□□□ -0.71
SF3A1-206ENST00000471037 EPB41L2O43491 1005 aaKnown RBP10.61□□□□□ -0.71
SF3A1-206ENST00000471037 KPNA6O60684 536 aa10.61□□□□□ -0.71
SF3A1-206ENST00000471037 FGAP02671 866 aa10.61□□□□□ -0.71
SF3A1-206ENST00000471037 MYL3P08590 195 aa10.61□□□□□ -0.71
SF3A1-206ENST00000471037 ACTN1P12814 892 aa10.61□□□□□ -0.71
SF3A1-206ENST00000471037 MYOGP15173 224 aa10.61□□□□□ -0.71
SF3A1-206ENST00000471037 COL9A1P20849 921 aa10.61□□□□□ -0.71
SF3A1-206ENST00000471037 MFAP1P55081 439 aaKnown RBP10.61□□□□□ -0.71
SF3A1-206ENST00000471037 RPS6P62753 249 aaKnown RBP10.61□□□□□ -0.71
SF3A1-206ENST00000471037 ZNF543Q08ER8 600 aa10.61□□□□□ -0.71
SF3A1-206ENST00000471037 PPP2R5BQ15173 497 aa10.61□□□□□ -0.71
SF3A1-206ENST00000471037 MCMDC2Q4G0Z9 681 aa10.61□□□□□ -0.71
SF3A1-206ENST00000471037 BRDTQ58F21 947 aaPredicted RBP10.61□□□□□ -0.71
SF3A1-206ENST00000471037 TMEM67Q5HYA8 995 aa10.61□□□□□ -0.71
SF3A1-206ENST00000471037 NFRKBQ6P4R8 1299 aa10.61□□□□□ -0.71
SF3A1-206ENST00000471037 RNF207Q6ZRF8 634 aa10.61□□□□□ -0.71
SF3A1-206ENST00000471037 OR6J1Q8NGC5 347 aa10.61□□□□□ -0.71
SF3A1-206ENST00000471037 SCFD2Q8WU76 684 aa10.61□□□□□ -0.71
SF3A1-206ENST00000471037 FAM227BQ96M60 508 aa10.61□□□□□ -0.71
SF3A1-206ENST00000471037 TTC14Q96N46 770 aa10.61□□□□□ -0.71
SF3A1-206ENST00000471037 SLC9A7Q96T83 725 aa10.61□□□□□ -0.71
SF3A1-206ENST00000471037 MAF1Q9H063 256 aa10.61□□□□□ -0.71
SF3A1-206ENST00000471037 UPF2Q9HAU5 1272 aaKnown RBP10.61□□□□□ -0.71
SF3A1-206ENST00000471037 GPHNQ9NQX3 736 aaPredicted RBP10.61□□□□□ -0.71
SF3A1-206ENST00000471037 FRMPD2Q68DX3 1309 aaPredicted RBP10.6□□□□□ -0.71
SF3A1-206ENST00000471037 CA3P07451 260 aa10.6□□□□□ -0.71
SF3A1-206ENST00000471037 PCP11498 1178 aaKnown RBP10.6□□□□□ -0.71
SF3A1-206ENST00000471037 CALML3P27482 149 aa10.6□□□□□ -0.71
SF3A1-206ENST00000471037 PDE4DQ08499 809 aa10.6□□□□□ -0.71
SF3A1-206ENST00000471037 NBPF20Q3BBV1 942 aa10.6□□□□□ -0.71
SF3A1-206ENST00000471037 RGS22Q8NE09 1264 aa10.6□□□□□ -0.71
SF3A1-206ENST00000471037 IL27Q8NEV9 243 aa10.6□□□□□ -0.71
SF3A1-206ENST00000471037 PHOSPHO2Q8TCD6 241 aa10.6□□□□□ -0.71
SF3A1-206ENST00000471037 GPCPD1Q9NPB8 672 aa10.6□□□□□ -0.71
SF3A1-206ENST00000471037 TOMM22Q9NS69 142 aa10.6□□□□□ -0.71
SF3A1-206ENST00000471037 CCDC171Q6TFL3 1326 aa10.59□□□□□ -0.71
SF3A1-206ENST00000471037 B4DLN1 442 aa10.59□□□□□ -0.71
SF3A1-206ENST00000471037 BAIAP3O94812 1187 aa10.59□□□□□ -0.71
SF3A1-206ENST00000471037 IQCF3P0C7M6 154 aa10.59□□□□□ -0.71
SF3A1-206ENST00000471037 HSPD1P10809 573 aaKnown RBP10.59□□□□□ -0.71
SF3A1-206ENST00000471037 BMP1P13497 986 aa10.59□□□□□ -0.71
SF3A1-206ENST00000471037 MRPL12P52815 198 aaKnown RBP10.59□□□□□ -0.71
SF3A1-206ENST00000471037 AAK1Q2M2I8 961 aa10.59□□□□□ -0.71
SF3A1-206ENST00000471037 FAM47CQ5HY64 1035 aa10.59□□□□□ -0.71
SF3A1-206ENST00000471037 RRP12Q5JTH9 1297 aaKnown RBP10.59□□□□□ -0.71
SF3A1-206ENST00000471037 GPATCH4Q5T3I0 446 aaKnown RBP10.59□□□□□ -0.71
SF3A1-206ENST00000471037 DEFB128Q7Z7B8 93 aa10.59□□□□□ -0.71
SF3A1-206ENST00000471037 MTCH2Q9Y6C9 303 aa10.59□□□□□ -0.71
SF3A1-206ENST00000471037 SCN5AQ14524 2016 aa10.58□□□□□ -0.72
SF3A1-206ENST00000471037 MYO9BQ13459 2157 aa10.58□□□□□ -0.72
SF3A1-206ENST00000471037 GTPBP6O43824 516 aaPredicted RBP10.58□□□□□ -0.72
SF3A1-206ENST00000471037 ARIH2O95376 493 aa10.58□□□□□ -0.72
SF3A1-206ENST00000471037 SEC24BO95487 1268 aa10.58□□□□□ -0.72
SF3A1-206ENST00000471037 TXNP10599 105 aaKnown RBP10.58□□□□□ -0.72
SF3A1-206ENST00000471037 NT5C2P49902 561 aa10.58□□□□□ -0.72
SF3A1-206ENST00000471037 BFSP2Q13515 415 aa10.58□□□□□ -0.72
SF3A1-206ENST00000471037 CCDC62Q6P9F0 684 aa10.58□□□□□ -0.72
SF3A1-206ENST00000471037 ZNF589Q86UQ0 364 aaPredicted RBP10.58□□□□□ -0.72
SF3A1-206ENST00000471037 SESTD1Q86VW0 696 aa10.58□□□□□ -0.72
SF3A1-206ENST00000471037 HERC6Q8IVU3 1022 aa10.58□□□□□ -0.72
SF3A1-206ENST00000471037 MICALL1Q8N3F8 863 aa10.58□□□□□ -0.72
SF3A1-206ENST00000471037 RETREG2Q8NC44 543 aa10.58□□□□□ -0.72
SF3A1-206ENST00000471037 CAGE1Q8TC20 777 aa10.58□□□□□ -0.72
SF3A1-206ENST00000471037 AFAP1L1Q8TED9 768 aa10.58□□□□□ -0.72
SF3A1-206ENST00000471037 COPS5Q92905 334 aa10.58□□□□□ -0.72
SF3A1-206ENST00000471037 IL25Q9H293 177 aa10.58□□□□□ -0.72
SF3A1-206ENST00000471037 ANO2Q9NQ90 1003 aa10.58□□□□□ -0.72
SF3A1-206ENST00000471037 XIRP2A4UGR9 3374 aa10.57□□□□□ -0.72
SF3A1-206ENST00000471037 EPOPA6NHQ4 379 aa10.57□□□□□ -0.72
SF3A1-206ENST00000471037 TFF2Q03403 129 aa10.57□□□□□ -0.72
SF3A1-206ENST00000471037 TAP1Q03518 808 aa10.57□□□□□ -0.72
SF3A1-206ENST00000471037 RBL2Q08999 1139 aa10.57□□□□□ -0.72
SF3A1-206ENST00000471037 MFSD6Q6ZSS7 791 aa10.57□□□□□ -0.72
SF3A1-206ENST00000471037 DGKHQ86XP1 1220 aa10.57□□□□□ -0.72
SF3A1-206ENST00000471037 TBC1D10CQ8IV04 446 aa10.57□□□□□ -0.72
SF3A1-206ENST00000471037 CCDC155Q8N6L0 562 aa10.57□□□□□ -0.72
SF3A1-206ENST00000471037 CTAGE1Q96RT6 745 aa10.57□□□□□ -0.72
SF3A1-206ENST00000471037 RNF41Q9H4P4 317 aaPredicted RBP10.57□□□□□ -0.72
SF3A1-206ENST00000471037 COG5Q9UP83 839 aa10.57□□□□□ -0.72
SF3A1-206ENST00000471037 NOD1Q9Y239 953 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms