RNA–Protein interactions for RNA: ENST00000470482.5

HDLBP-232, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 624 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-232ENST00000470482 RAG1P15918 1043 aa13.67□□□□□ -0.22
HDLBP-232ENST00000470482 SCFD2Q8WU76 684 aa13.67□□□□□ -0.22
HDLBP-232ENST00000470482 COPS5Q92905 334 aa13.67□□□□□ -0.22
HDLBP-232ENST00000470482 GUCD1Q96NT3 240 aa13.67□□□□□ -0.22
HDLBP-232ENST00000470482 CTAGE1Q96RT6 745 aa13.67□□□□□ -0.22
HDLBP-232ENST00000470482 AMNQ9BXJ7 453 aa13.67□□□□□ -0.22
HDLBP-232ENST00000470482 LY9Q9HBG7 655 aa13.67□□□□□ -0.22
HDLBP-232ENST00000470482 VAT1LQ9HCJ6 419 aa13.67□□□□□ -0.22
HDLBP-232ENST00000470482 MRPL11Q9Y3B7 192 aaKnown RBP13.67□□□□□ -0.22
HDLBP-232ENST00000470482 CUL9Q8IWT3 2517 aa13.67□□□□□ -0.22
HDLBP-232ENST00000470482 IFIT3O14879 490 aaKnown RBP13.66□□□□□ -0.22
HDLBP-232ENST00000470482 HOXD8P13378 290 aaPredicted RBP13.66□□□□□ -0.22
HDLBP-232ENST00000470482 SMARCA1P28370 1054 aa13.66□□□□□ -0.22
HDLBP-232ENST00000470482 PSMC6P62333 389 aa13.66□□□□□ -0.22
HDLBP-232ENST00000470482 FPGSQ05932 587 aa13.66□□□□□ -0.22
HDLBP-232ENST00000470482 ARHGAP1Q07960 439 aa13.66□□□□□ -0.22
HDLBP-232ENST00000470482 TMEM240Q5SV17 173 aa13.66□□□□□ -0.22
HDLBP-232ENST00000470482 CHST3Q7LGC8 479 aa13.66□□□□□ -0.22
HDLBP-232ENST00000470482 VSIG10LQ86VR7 867 aa13.66□□□□□ -0.22
HDLBP-232ENST00000470482 MCF2L2Q86YR7 1114 aa13.66□□□□□ -0.22
HDLBP-232ENST00000470482 NSUN6Q8TEA1 469 aaKnown RBP13.66□□□□□ -0.22
HDLBP-232ENST00000470482 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.66□□□□□ -0.222e-20■□□□□ 9.9
HDLBP-232ENST00000470482 NOC4LQ9BVI4 516 aaKnown RBP13.66□□□□□ -0.22
HDLBP-232ENST00000470482 TRPV6Q9H1D0 765 aa13.66□□□□□ -0.22
HDLBP-232ENST00000470482 ALDH8A1Q9H2A2 487 aaPredicted RBP13.66□□□□□ -0.22
HDLBP-232ENST00000470482 TTYH1Q9H313 450 aaPredicted RBP13.66□□□□□ -0.22
HDLBP-232ENST00000470482 PXMP2Q9NR77 195 aa13.66□□□□□ -0.22
HDLBP-232ENST00000470482 STXBP5LQ9Y2K9 1186 aa13.66□□□□□ -0.22
HDLBP-232ENST00000470482 UMODL1Q5DID0 1318 aa13.65□□□□□ -0.22
HDLBP-232ENST00000470482 EYSQ5T1H1 3165 aa13.65□□□□□ -0.22
HDLBP-232ENST00000470482 SLC27A2O14975 620 aa13.65□□□□□ -0.22
HDLBP-232ENST00000470482 ZEB2O60315 1214 aa13.65□□□□□ -0.22
HDLBP-232ENST00000470482 B4GALT4O60513 344 aa13.65□□□□□ -0.22
HDLBP-232ENST00000470482 NR3C2P08235 984 aa13.65□□□□□ -0.22
HDLBP-232ENST00000470482 PDE4DQ08499 809 aa13.65□□□□□ -0.22
HDLBP-232ENST00000470482 TRDNQ13061 729 aa13.65□□□□□ -0.22
HDLBP-232ENST00000470482 TSGA10IPQ3SY00 556 aa13.65□□□□□ -0.22
HDLBP-232ENST00000470482 NOL8Q76FK4 1167 aaKnown RBP13.65□□□□□ -0.22
HDLBP-232ENST00000470482 CENPQQ7L2Z9 268 aaPredicted RBP13.65□□□□□ -0.22
HDLBP-232ENST00000470482 KAT2BQ92831 832 aa13.65□□□□□ -0.22
HDLBP-232ENST00000470482 EMID1Q96A84 441 aaPredicted RBP13.65□□□□□ -0.22
HDLBP-232ENST00000470482 PIGSQ96S52 555 aa13.65□□□□□ -0.22
HDLBP-232ENST00000470482 RMDN3Q96TC7 470 aa13.65□□□□□ -0.22
HDLBP-232ENST00000470482 PDCD2LQ9BRP1 358 aa13.65□□□□□ -0.22
HDLBP-232ENST00000470482 WNT8AQ9H1J5 351 aa13.65□□□□□ -0.22
HDLBP-232ENST00000470482 SEMA6BQ9H3T3 888 aa13.65□□□□□ -0.22
HDLBP-232ENST00000470482 DDX41Q9UJV9 622 aaKnown RBP13.65□□□□□ -0.22
HDLBP-232ENST00000470482 PCDHA1Q9Y5I3 950 aa13.65□□□□□ -0.22
HDLBP-232ENST00000470482 FRMPD4Q14CM0 1322 aa13.64□□□□□ -0.23
HDLBP-232ENST00000470482 MYH6P13533 1939 aa13.64□□□□□ -0.23
HDLBP-232ENST00000470482 PNMA6FA0A0J9YX94 578 aa13.64□□□□□ -0.23
HDLBP-232ENST00000470482 SH2B2O14492 632 aaPredicted RBP13.64□□□□□ -0.23
HDLBP-232ENST00000470482 EIF3JO75822 258 aaKnown RBP13.64□□□□□ -0.23
HDLBP-232ENST00000470482 TXNP10599 105 aaKnown RBP13.64□□□□□ -0.23
HDLBP-232ENST00000470482 CSF2RAP15509 400 aa13.64□□□□□ -0.23
HDLBP-232ENST00000470482 CYP2C18P33260 490 aa13.64□□□□□ -0.23
HDLBP-232ENST00000470482 LIFRP42702 1097 aa13.64□□□□□ -0.23
HDLBP-232ENST00000470482 EXOSC10Q01780 885 aaKnown RBP13.64□□□□□ -0.23
HDLBP-232ENST00000470482 WTAPQ15007 396 aa13.64□□□□□ -0.23
HDLBP-232ENST00000470482 CREB3L3Q68CJ9 461 aa13.64□□□□□ -0.23
HDLBP-232ENST00000470482 KCNB2Q92953 911 aa13.64□□□□□ -0.23
HDLBP-232ENST00000470482 SPZ1Q9BXG8 430 aa13.64□□□□□ -0.23
HDLBP-232ENST00000470482 POLR3EQ9NVU0 708 aa13.64□□□□□ -0.23
HDLBP-232ENST00000470482 UNC80Q8N2C7 3258 aa13.64□□□□□ -0.23
HDLBP-232ENST00000470482 KIAA1217Q5T5P2 1943 aa13.64□□□□□ -0.23
HDLBP-232ENST00000470482 B4DLN1 442 aa13.63□□□□□ -0.23
HDLBP-232ENST00000470482 KPNA6O60684 536 aa13.63□□□□□ -0.23
HDLBP-232ENST00000470482 CPT1AP50416 773 aa13.63□□□□□ -0.23
HDLBP-232ENST00000470482 MRPL12P52815 198 aaKnown RBP13.63□□□□□ -0.23
HDLBP-232ENST00000470482 TTLL4Q14679 1199 aa13.63□□□□□ -0.23
HDLBP-232ENST00000470482 PPP2R5BQ15173 497 aa13.63□□□□□ -0.23
HDLBP-232ENST00000470482 STXBP2Q15833 593 aa13.63□□□□□ -0.23
HDLBP-232ENST00000470482 LY6KQ17RY6 165 aa13.63□□□□□ -0.23
HDLBP-232ENST00000470482 NBPF20Q3BBV1 942 aa13.63□□□□□ -0.23
HDLBP-232ENST00000470482 TMEM67Q5HYA8 995 aa13.63□□□□□ -0.23
HDLBP-232ENST00000470482 NFRKBQ6P4R8 1299 aa13.63□□□□□ -0.23
HDLBP-232ENST00000470482 SESTD1Q86VW0 696 aa13.63□□□□□ -0.23
HDLBP-232ENST00000470482 SGMS1Q86VZ5 419 aa13.63□□□□□ -0.23
HDLBP-232ENST00000470482 OR6J1Q8NGC5 347 aa13.63□□□□□ -0.23
HDLBP-232ENST00000470482 IL31RAQ8NI17 732 aa13.63□□□□□ -0.23
HDLBP-232ENST00000470482 VTI1AQ96AJ9 217 aa13.63□□□□□ -0.23
HDLBP-232ENST00000470482 MTG1Q9BT17 334 aaPredicted RBP13.63□□□□□ -0.23
HDLBP-232ENST00000470482 HAS3O00219 553 aa13.62□□□□□ -0.23
HDLBP-232ENST00000470482 PRC1O43663 620 aa13.62□□□□□ -0.23
HDLBP-232ENST00000470482 CFBP00751 764 aa13.62□□□□□ -0.23
HDLBP-232ENST00000470482 SP2Q02086 613 aa13.62□□□□□ -0.23
HDLBP-232ENST00000470482 PTPN11Q06124 597 aaPredicted RBP13.62□□□□□ -0.23
HDLBP-232ENST00000470482 PPIGQ13427 754 aaKnown RBP eCLIP13.62□□□□□ -0.231e-14■□□□□ 8.4
HDLBP-232ENST00000470482 GPNMBQ14956 572 aa13.62□□□□□ -0.23
HDLBP-232ENST00000470482 PGM5Q15124 567 aa13.62□□□□□ -0.23
HDLBP-232ENST00000470482 ZNF365Q70YC5 407 aa13.62□□□□□ -0.23
HDLBP-232ENST00000470482 ZNF654Q8IZM8 581 aa13.62□□□□□ -0.23
HDLBP-232ENST00000470482 SRBD1Q8N5C6 995 aaKnown RBP13.62□□□□□ -0.23
HDLBP-232ENST00000470482 AFG1LQ8WV93 481 aa13.62□□□□□ -0.23
HDLBP-232ENST00000470482 HERVK_113Q902F9 699 aa13.62□□□□□ -0.23
HDLBP-232ENST00000470482 TMEM87BQ96K49 555 aa13.62□□□□□ -0.23
HDLBP-232ENST00000470482 IL23AQ9NPF7 189 aa13.62□□□□□ -0.23
HDLBP-232ENST00000470482 TRMT13Q9NUP7 481 aaKnown RBP13.62□□□□□ -0.23
HDLBP-232ENST00000470482 TRANK1O15050 2925 aa13.61□□□□□ -0.23
HDLBP-232ENST00000470482 TMEM265A0A087WTH1 108 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms