RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 MYMKA6NI61 221 aa15.21■□□□□ 0.03
BRCA1-209ENST00000470026 N4BP1O75113 896 aaKnown RBP15.21■□□□□ 0.03
BRCA1-209ENST00000470026 IPO7O95373 1038 aaKnown RBP15.21■□□□□ 0.03
BRCA1-209ENST00000470026 PDIA5Q14554 519 aa15.21■□□□□ 0.03
BRCA1-209ENST00000470026 VPS72Q15906 364 aa15.21■□□□□ 0.03
BRCA1-209ENST00000470026 VWA3BQ502W6 1294 aa15.21■□□□□ 0.03
BRCA1-209ENST00000470026 TEX11Q8IYF3 940 aa15.21■□□□□ 0.03
BRCA1-209ENST00000470026 FNBP4Q8N3X1 1017 aaPredicted RBP15.21■□□□□ 0.03
BRCA1-209ENST00000470026 ZC3H4Q9UPT8 1303 aaKnown RBP15.21■□□□□ 0.03
BRCA1-209ENST00000470026 LTBP4Q8N2S1 1624 aa15.21■□□□□ 0.02
BRCA1-209ENST00000470026 SRGAP2O75044 1071 aa15.2■□□□□ 0.02
BRCA1-209ENST00000470026 RPS6KA5O75582 802 aa15.2■□□□□ 0.02
BRCA1-209ENST00000470026 SNHG28P0DPA3 235 aa15.2■□□□□ 0.02
BRCA1-209ENST00000470026 PDHBP11177 359 aa15.2■□□□□ 0.02
BRCA1-209ENST00000470026 PRLRP16471 622 aa15.2■□□□□ 0.02
BRCA1-209ENST00000470026 GPSM2P81274 684 aa15.2■□□□□ 0.02
BRCA1-209ENST00000470026 ITIH3Q06033 890 aa15.2■□□□□ 0.02
BRCA1-209ENST00000470026 GOLGA5Q8TBA6 731 aa15.2■□□□□ 0.02
BRCA1-209ENST00000470026 CERKQ8TCT0 537 aa15.2■□□□□ 0.02
BRCA1-209ENST00000470026 VPS18Q9P253 973 aa15.2■□□□□ 0.02
BRCA1-209ENST00000470026 CCNL1Q9UK58 526 aaPredicted RBP15.2■□□□□ 0.02
BRCA1-209ENST00000470026 ATP2B4P23634 1241 aa15.2■□□□□ 0.02
BRCA1-209ENST00000470026 LRRC63Q05C16 580 aa15.2■□□□□ 0.02
BRCA1-209ENST00000470026 MAN2A1Q16706 1144 aa15.2■□□□□ 0.02
BRCA1-209ENST00000470026 TMEM119Q4V9L6 283 aa15.2■□□□□ 0.02
BRCA1-209ENST00000470026 ARHGAP27Q6ZUM4 889 aa15.2■□□□□ 0.02
BRCA1-209ENST00000470026 LARP4BQ92615 738 aaKnown RBP15.2■□□□□ 0.02
BRCA1-209ENST00000470026 EEF2KMTQ96G04 330 aa15.2■□□□□ 0.02
BRCA1-209ENST00000470026 EDEM3Q9BZQ6 932 aa15.2■□□□□ 0.02
BRCA1-209ENST00000470026 ACBD3Q9H3P7 528 aa15.2■□□□□ 0.02
BRCA1-209ENST00000470026 NDST4Q9H3R1 872 aa15.2■□□□□ 0.02
BRCA1-209ENST00000470026 TMEM260Q9NX78 707 aa15.2■□□□□ 0.02
BRCA1-209ENST00000470026 ARHGAP20Q9P2F6 1191 aa15.2■□□□□ 0.02
BRCA1-209ENST00000470026 BIN2Q9UBW5 565 aaPredicted RBP15.2■□□□□ 0.02
BRCA1-209ENST00000470026 IGKV6D-41A0A0C4DH26 115 aa15.19■□□□□ 0.02
BRCA1-209ENST00000470026 USP17L5A8MUK1 530 aa15.19■□□□□ 0.02
BRCA1-209ENST00000470026 PDE2AO00408 941 aaPredicted RBP15.19■□□□□ 0.02
BRCA1-209ENST00000470026 KIF5AQ12840 1032 aa15.19■□□□□ 0.02
BRCA1-209ENST00000470026 CALCRLQ16602 461 aa15.19■□□□□ 0.02
BRCA1-209ENST00000470026 ZSCAN26Q16670 478 aa15.19■□□□□ 0.02
BRCA1-209ENST00000470026 CRY2Q49AN0 593 aa15.19■□□□□ 0.02
BRCA1-209ENST00000470026 MAP9Q49MG5 647 aa15.19■□□□□ 0.02
BRCA1-209ENST00000470026 LRRC55Q6ZSA7 311 aa15.19■□□□□ 0.02
BRCA1-209ENST00000470026 RAD54LQ92698 747 aa15.19■□□□□ 0.02
BRCA1-209ENST00000470026 SECISBP2LQ93073 1101 aaKnown RBP15.19■□□□□ 0.02
BRCA1-209ENST00000470026 HPS3Q969F9 1004 aa15.19■□□□□ 0.02
BRCA1-209ENST00000470026 SH2D4AQ9H788 454 aa15.19■□□□□ 0.02
BRCA1-209ENST00000470026 SLC39A2Q9NP94 309 aa15.19■□□□□ 0.02
BRCA1-209ENST00000470026 LRWD1Q9UFC0 647 aa15.19■□□□□ 0.02
BRCA1-209ENST00000470026 FAN1Q9Y2M0 1017 aa15.19■□□□□ 0.02
BRCA1-209ENST00000470026 DUSP10Q9Y6W6 482 aa15.19■□□□□ 0.02
BRCA1-209ENST00000470026 EPHB6O15197 1021 aa15.19■□□□□ 0.02
BRCA1-209ENST00000470026 SLC37A4O43826 429 aa15.19■□□□□ 0.02
BRCA1-209ENST00000470026 FGFR1OPO95684 399 aaKnown RBP15.19■□□□□ 0.02
BRCA1-209ENST00000470026 ACTN2P35609 894 aa15.19■□□□□ 0.02
BRCA1-209ENST00000470026 TXKP42681 527 aa15.19■□□□□ 0.02
BRCA1-209ENST00000470026 LMAN1P49257 510 aa15.19■□□□□ 0.02
BRCA1-209ENST00000470026 CYP27A1Q02318 531 aa15.19■□□□□ 0.02
BRCA1-209ENST00000470026 GABPAQ06546 454 aa15.19■□□□□ 0.02
BRCA1-209ENST00000470026 PSMD2Q13200 908 aa15.19■□□□□ 0.02
BRCA1-209ENST00000470026 ASPRV1Q53RT3 343 aa15.19■□□□□ 0.02
BRCA1-209ENST00000470026 CCDC84Q86UT8 332 aaPredicted RBP15.19■□□□□ 0.02
BRCA1-209ENST00000470026 TRIM58Q8NG06 486 aa15.19■□□□□ 0.02
BRCA1-209ENST00000470026 RUBCNQ92622 972 aa15.19■□□□□ 0.02
BRCA1-209ENST00000470026 CCDC42Q96M95 316 aa15.19■□□□□ 0.02
BRCA1-209ENST00000470026 GPR101Q96P66 508 aaPredicted RBP15.19■□□□□ 0.02
BRCA1-209ENST00000470026 SNX12Q9UMY4 172 aa15.19■□□□□ 0.02
BRCA1-209ENST00000470026 JRKLQ9Y4A0 524 aa15.19■□□□□ 0.02
BRCA1-209ENST00000470026 SPA17Q15506 151 aa15.18■□□□□ 0.02
BRCA1-209ENST00000470026 PPP1R18Q6NYC8 613 aa15.18■□□□□ 0.02
BRCA1-209ENST00000470026 SLF2Q8IX21 1173 aa15.18■□□□□ 0.02
BRCA1-209ENST00000470026 MMGT1Q8N4V1 131 aa15.18■□□□□ 0.02
BRCA1-209ENST00000470026 CNBD1Q8NA66 436 aa15.18■□□□□ 0.02
BRCA1-209ENST00000470026 BAP1Q92560 729 aa15.18■□□□□ 0.02
BRCA1-209ENST00000470026 LRRC27Q9C0I9 530 aa15.18■□□□□ 0.02
BRCA1-209ENST00000470026 UBA5Q9GZZ9 404 aa15.18■□□□□ 0.02
BRCA1-209ENST00000470026 MTMR4Q9NYA4 1195 aa15.18■□□□□ 0.02
BRCA1-209ENST00000470026 THSD7AQ9UPZ6 1657 aa15.18■□□□□ 0.02
BRCA1-209ENST00000470026 PJA2O43164 708 aa15.17■□□□□ 0.02
BRCA1-209ENST00000470026 PLEKP08567 350 aaPredicted RBP15.17■□□□□ 0.02
BRCA1-209ENST00000470026 ADCY7P51828 1080 aa15.17■□□□□ 0.02
BRCA1-209ENST00000470026 TMEM266Q2M3C6 531 aa15.17■□□□□ 0.02
BRCA1-209ENST00000470026 ASTE1Q2TB18 679 aaPredicted RBP15.17■□□□□ 0.02
BRCA1-209ENST00000470026 PPP4R3AQ6IN85 833 aa15.17■□□□□ 0.02
BRCA1-209ENST00000470026 CCNI2Q6ZMN8 369 aaPredicted RBP15.17■□□□□ 0.02
BRCA1-209ENST00000470026 CREG2Q8IUH2 290 aa15.17■□□□□ 0.02
BRCA1-209ENST00000470026 PCMTD1Q96MG8 357 aaPredicted RBP15.17■□□□□ 0.02
BRCA1-209ENST00000470026 RAB34Q9BZG1 259 aa15.17■□□□□ 0.02
BRCA1-209ENST00000470026 RIC8AQ9NPQ8 531 aa15.17■□□□□ 0.02
BRCA1-209ENST00000470026 PODXL2Q9NZ53 605 aa15.17■□□□□ 0.02
BRCA1-209ENST00000470026 HPCAL4Q9UM19 191 aa15.17■□□□□ 0.02
BRCA1-209ENST00000470026 PCDHA13Q9Y5I0 950 aa15.17■□□□□ 0.02
BRCA1-209ENST00000470026 LTBP1Q14766 1721 aa15.17■□□□□ 0.02
BRCA1-209ENST00000470026 USO1O60763 962 aaKnown RBP15.17■□□□□ 0.02
BRCA1-209ENST00000470026 PRPF6O94906 941 aaKnown RBP15.17■□□□□ 0.02
BRCA1-209ENST00000470026 TDP2O95551 362 aa15.17■□□□□ 0.02
BRCA1-209ENST00000470026 SYF2O95926 243 aaKnown RBP15.17■□□□□ 0.02
BRCA1-209ENST00000470026 IDEP14735 1019 aa15.17■□□□□ 0.02
BRCA1-209ENST00000470026 CLK2P49760 499 aaKnown RBP15.17■□□□□ 0.02
BRCA1-209ENST00000470026 MAPK8IP2Q13387 824 aaPredicted RBP15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms