RNA–Protein interactions for RNA: ENST00000467996.1

RNF13-208, Transcript of ring finger protein 13, humanhuman

TSL 5

Gene RNF13, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13-208ENST00000467996 KCTD2Q14681 263 aa13.51□□□□□ -0.25
RNF13-208ENST00000467996 GPR142Q7Z601 462 aa13.51□□□□□ -0.25
RNF13-208ENST00000467996 NEK8Q86SG6 692 aa13.51□□□□□ -0.25
RNF13-208ENST00000467996 CCAR1Q8IX12 1150 aaKnown RBP13.51□□□□□ -0.25
RNF13-208ENST00000467996 ZNF396Q96N95 335 aaPredicted RBP13.51□□□□□ -0.25
RNF13-208ENST00000467996 PURBQ96QR8 312 aaKnown RBP13.51□□□□□ -0.25
RNF13-208ENST00000467996 TAAR1Q96RJ0 339 aa13.51□□□□□ -0.25
RNF13-208ENST00000467996 USP28Q96RU2 1077 aa13.51□□□□□ -0.25
RNF13-208ENST00000467996 FTOQ9C0B1 505 aaKnown RBP eCLIP13.51□□□□□ -0.25
RNF13-208ENST00000467996 EHMT1Q9H9B1 1298 aa13.51□□□□□ -0.25
RNF13-208ENST00000467996 DOCK3Q8IZD9 2030 aa13.51□□□□□ -0.25
RNF13-208ENST00000467996 MCM3APO60318 1980 aa13.51□□□□□ -0.25
RNF13-208ENST00000467996 TRPA1O75762 1119 aa13.5□□□□□ -0.25
RNF13-208ENST00000467996 BAG4O95429 457 aaKnown RBP13.5□□□□□ -0.25
RNF13-208ENST00000467996 NCLP19338 710 aaKnown RBP13.5□□□□□ -0.25
RNF13-208ENST00000467996 ATP2B1P20020 1258 aa13.5□□□□□ -0.25
RNF13-208ENST00000467996 UBXN2AP68543 259 aa13.5□□□□□ -0.25
RNF13-208ENST00000467996 KRT85P78386 507 aa13.5□□□□□ -0.25
RNF13-208ENST00000467996 ARHGAP4P98171 946 aa13.5□□□□□ -0.25
RNF13-208ENST00000467996 CNTN2Q02246 1040 aa13.5□□□□□ -0.25
RNF13-208ENST00000467996 TTC38Q5R3I4 469 aa13.5□□□□□ -0.25
RNF13-208ENST00000467996 CLEC17AQ6ZS10 378 aa13.5□□□□□ -0.25
RNF13-208ENST00000467996 ABRAQ8N0Z2 381 aa13.5□□□□□ -0.25
RNF13-208ENST00000467996 CRYGNQ8WXF5 182 aa13.5□□□□□ -0.25
RNF13-208ENST00000467996 PXMP2Q9NR77 195 aa13.5□□□□□ -0.25
RNF13-208ENST00000467996 CNPY2Q9Y2B0 182 aa13.5□□□□□ -0.25
RNF13-208ENST00000467996 PCDHB6Q9Y5E3 794 aa13.5□□□□□ -0.25
RNF13-208ENST00000467996 IVNS1ABPQ9Y6Y0 642 aa13.5□□□□□ -0.25
RNF13-208ENST00000467996 CASP8AP2Q9UKL3 1982 aa13.49□□□□□ -0.25
RNF13-208ENST00000467996 ASTN1O14525 1302 aa13.49□□□□□ -0.25
RNF13-208ENST00000467996 DNAJC25-GNG10A0A024R161 153 aa13.49□□□□□ -0.25
RNF13-208ENST00000467996 POTEB2H3BUK9 544 aa13.49□□□□□ -0.25
RNF13-208ENST00000467996 EDIL3O43854 480 aa13.49□□□□□ -0.25
RNF13-208ENST00000467996 PGK2P07205 417 aa13.49□□□□□ -0.25
RNF13-208ENST00000467996 EIF2AK2P19525 551 aaKnown RBP13.49□□□□□ -0.25
RNF13-208ENST00000467996 PTPREP23469 700 aa13.49□□□□□ -0.25
RNF13-208ENST00000467996 ADORA2AP29274 412 aa13.49□□□□□ -0.25
RNF13-208ENST00000467996 CEBPZQ03701 1054 aaKnown RBP13.49□□□□□ -0.25
RNF13-208ENST00000467996 GRB14Q14449 540 aa13.49□□□□□ -0.25
RNF13-208ENST00000467996 PGM5Q15124 567 aa13.49□□□□□ -0.25
RNF13-208ENST00000467996 LETM2Q2VYF4 491 aa13.49□□□□□ -0.25
RNF13-208ENST00000467996 ANO1Q5XXA6 986 aa13.49□□□□□ -0.25
RNF13-208ENST00000467996 ATL3Q6DD88 541 aa13.49□□□□□ -0.25
RNF13-208ENST00000467996 PLEKHH3Q7Z736 793 aa13.49□□□□□ -0.25
RNF13-208ENST00000467996 FAM133AQ8N9E0 248 aa13.49□□□□□ -0.25
RNF13-208ENST00000467996 IL31RAQ8NI17 732 aa13.49□□□□□ -0.25
RNF13-208ENST00000467996 RMDN3Q96TC7 470 aa13.49□□□□□ -0.25
RNF13-208ENST00000467996 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.49□□□□□ -0.25
RNF13-208ENST00000467996 POLR3EQ9NVU0 708 aa13.49□□□□□ -0.25
RNF13-208ENST00000467996 SAGE1Q9NXZ1 904 aa13.49□□□□□ -0.25
RNF13-208ENST00000467996 TFIP11Q9UBB9 837 aaKnown RBP13.49□□□□□ -0.25
RNF13-208ENST00000467996 CLIC4Q9Y696 253 aa13.49□□□□□ -0.25
RNF13-208ENST00000467996 FIBPO43427 364 aa13.48□□□□□ -0.25
RNF13-208ENST00000467996 STRNO43815 780 aa13.48□□□□□ -0.25
RNF13-208ENST00000467996 CCNT1O60563 726 aaKnown RBP13.48□□□□□ -0.25
RNF13-208ENST00000467996 ECM2O94769 699 aaPredicted RBP13.48□□□□□ -0.25
RNF13-208ENST00000467996 TDP2O95551 362 aa13.48□□□□□ -0.25
RNF13-208ENST00000467996 CYP3A4P08684 503 aa13.48□□□□□ -0.25
RNF13-208ENST00000467996 CTGFP29279 349 aa13.48□□□□□ -0.25
RNF13-208ENST00000467996 NASPP49321 788 aaPredicted RBP13.48□□□□□ -0.25
RNF13-208ENST00000467996 ALDH5A1P51649 535 aaPredicted RBP13.48□□□□□ -0.25
RNF13-208ENST00000467996 SF3A1Q15459 793 aaKnown RBP13.48□□□□□ -0.25
RNF13-208ENST00000467996 ZNF174Q15697 407 aa13.48□□□□□ -0.25
RNF13-208ENST00000467996 ARHGEF16Q5VV41 709 aa13.48□□□□□ -0.25
RNF13-208ENST00000467996 DNERQ8NFT8 737 aa13.48□□□□□ -0.25
RNF13-208ENST00000467996 FGD4Q96M96 766 aa13.48□□□□□ -0.25
RNF13-208ENST00000467996 GBP4Q96PP9 640 aa13.48□□□□□ -0.25
RNF13-208ENST00000467996 PDCD2LQ9BRP1 358 aa13.48□□□□□ -0.25
RNF13-208ENST00000467996 RTEL1Q9NZ71 1219 aa13.48□□□□□ -0.25
RNF13-208ENST00000467996 CFAP45Q9UL16 551 aa13.48□□□□□ -0.25
RNF13-208ENST00000467996 SOWAHBA6NEL2 793 aa13.47□□□□□ -0.25
RNF13-208ENST00000467996 SLC15A5A6NIM6 579 aa13.47□□□□□ -0.25
RNF13-208ENST00000467996 YEATS4O95619 227 aa13.47□□□□□ -0.25
RNF13-208ENST00000467996 GCFC2P16383 781 aaKnown RBP13.47□□□□□ -0.25
RNF13-208ENST00000467996 CIITAP33076 1130 aa13.47□□□□□ -0.25
RNF13-208ENST00000467996 MCM7P33993 719 aa13.47□□□□□ -0.25
RNF13-208ENST00000467996 USP11P51784 963 aa13.47□□□□□ -0.25
RNF13-208ENST00000467996 LACTBP83111 547 aaPredicted RBP13.47□□□□□ -0.25
RNF13-208ENST00000467996 PTPAQ15257 358 aa13.47□□□□□ -0.25
RNF13-208ENST00000467996 PCNX4Q63HM2 1172 aa13.47□□□□□ -0.25
RNF13-208ENST00000467996 MOXD1Q6UVY6 613 aa13.47□□□□□ -0.25
RNF13-208ENST00000467996 NSUN6Q8TEA1 469 aaKnown RBP13.47□□□□□ -0.25
RNF13-208ENST00000467996 NAP1L4Q99733 375 aaKnown RBP13.47□□□□□ -0.25
RNF13-208ENST00000467996 ARHGAP39Q9C0H5 1083 aa13.47□□□□□ -0.25
RNF13-208ENST00000467996 GDPD2Q9HCC8 539 aa13.47□□□□□ -0.25
RNF13-208ENST00000467996 ADD3Q9UEY8 706 aaKnown RBP13.47□□□□□ -0.25
RNF13-208ENST00000467996 DOCK5Q9H7D0 1870 aa13.46□□□□□ -0.25
RNF13-208ENST00000467996 TNPO2O14787 897 aaKnown RBP13.46□□□□□ -0.25
RNF13-208ENST00000467996 SLC37A4O43826 429 aa13.46□□□□□ -0.25
RNF13-208ENST00000467996 NEMFO60524 1076 aa13.46□□□□□ -0.25
RNF13-208ENST00000467996 COBLO75128 1261 aa13.46□□□□□ -0.25
RNF13-208ENST00000467996 CCND2P30279 289 aa13.46□□□□□ -0.25
RNF13-208ENST00000467996 FCGRTP55899 365 aa13.46□□□□□ -0.25
RNF13-208ENST00000467996 SP3Q02447 781 aa13.46□□□□□ -0.25
RNF13-208ENST00000467996 MAP2K1Q02750 393 aaPredicted RBP13.46□□□□□ -0.25
RNF13-208ENST00000467996 ORC2Q13416 577 aaPredicted RBP13.46□□□□□ -0.25
RNF13-208ENST00000467996 ZNF792Q3KQV3 632 aa13.46□□□□□ -0.25
RNF13-208ENST00000467996 MORN1Q5T089 497 aa13.46□□□□□ -0.25
RNF13-208ENST00000467996 PPP4R3AQ6IN85 833 aa13.46□□□□□ -0.25
RNF13-208ENST00000467996 LINC00301Q8NCQ3 95 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms