RNA–Protein interactions for RNA: ENST00000467957.1

YBX1-204, Transcript of Y-box binding protein 1, humanhuman

TSL 2

Gene YBX1, Length 770 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1-204ENST00000467957 C6orf222P0C671 652 aaPredicted RBP21.56■■□□□ 1.04
YBX1-204ENST00000467957 POLR2MP0CAP2 368 aa21.56■■□□□ 1.04
YBX1-204ENST00000467957 ACLYP53396 1101 aa21.56■■□□□ 1.04
YBX1-204ENST00000467957 KCNA10Q16322 511 aa21.56■■□□□ 1.04
YBX1-204ENST00000467957 DUSP28Q4G0W2 176 aa21.56■■□□□ 1.04
YBX1-204ENST00000467957 ARHGEF16Q5VV41 709 aa21.56■■□□□ 1.04
YBX1-204ENST00000467957 RUFY3Q7L099 469 aa21.56■■□□□ 1.04
YBX1-204ENST00000467957 C7orf61Q8IZ16 206 aa21.56■■□□□ 1.04
YBX1-204ENST00000467957 WDR11Q9BZH6 1224 aa21.56■■□□□ 1.04
YBX1-204ENST00000467957 PXMP2Q9NR77 195 aa21.56■■□□□ 1.04
YBX1-204ENST00000467957 A0A1W2PQ45 241 aaPredicted RBP21.55■■□□□ 1.04
YBX1-204ENST00000467957 A0A1W2PQY0 241 aa21.55■■□□□ 1.04
YBX1-204ENST00000467957 GOLGA8AA7E2F4 631 aa21.55■■□□□ 1.04
YBX1-204ENST00000467957 GOLGA8BA8MQT2 603 aa21.55■■□□□ 1.04
YBX1-204ENST00000467957 ATN1P54259 1190 aaPredicted RBP21.55■■□□□ 1.04
YBX1-204ENST00000467957 FUT2Q10981 343 aa21.55■■□□□ 1.04
YBX1-204ENST00000467957 STXBP2Q15833 593 aa21.55■■□□□ 1.04
YBX1-204ENST00000467957 NOL8Q76FK4 1167 aaKnown RBP21.55■■□□□ 1.04
YBX1-204ENST00000467957 TLK2Q86UE8 772 aa21.55■■□□□ 1.04
YBX1-204ENST00000467957 SCFD2Q8WU76 684 aa21.55■■□□□ 1.04
YBX1-204ENST00000467957 BRF1Q92994 677 aa21.55■■□□□ 1.04
YBX1-204ENST00000467957 FERMT2Q96AC1 680 aa21.55■■□□□ 1.04
YBX1-204ENST00000467957 AP5M1Q9H0R1 490 aa21.55■■□□□ 1.04
YBX1-204ENST00000467957 FAM217BQ9NTX9 383 aaPredicted RBP21.55■■□□□ 1.04
YBX1-204ENST00000467957 NID2Q14112 1375 aa21.55■■□□□ 1.04
YBX1-204ENST00000467957 HOXA13P31271 388 aaPredicted RBP21.54■■□□□ 1.04
YBX1-204ENST00000467957 EVCP57679 992 aa21.54■■□□□ 1.04
YBX1-204ENST00000467957 IRX5P78411 483 aaPredicted RBP21.54■■□□□ 1.04
YBX1-204ENST00000467957 APOBRQ0VD83 1088 aa21.54■■□□□ 1.04
YBX1-204ENST00000467957 GNASQ5JWF2 1037 aa21.54■■□□□ 1.04
YBX1-204ENST00000467957 TMEM63BQ5T3F8 832 aa21.54■■□□□ 1.04
YBX1-204ENST00000467957 CCDC82Q8N4S0 544 aa21.54■■□□□ 1.04
YBX1-204ENST00000467957 PDCD2LQ9BRP1 358 aa21.54■■□□□ 1.04
YBX1-204ENST00000467957 CNTNAP5Q8WYK1 1306 aa21.54■■□□□ 1.04
YBX1-204ENST00000467957 CEP290O15078 2479 aa21.53■■□□□ 1.04
YBX1-204ENST00000467957 CCDC196A0A1B0GTZ2 297 aa21.53■■□□□ 1.04
YBX1-204ENST00000467957 PIK3CDO00329 1044 aa21.53■■□□□ 1.04
YBX1-204ENST00000467957 NKRFO15226 690 aaKnown RBP eCLIP21.53■■□□□ 1.04
YBX1-204ENST00000467957 DYNC1LI2O43237 492 aaPredicted RBP21.53■■□□□ 1.04
YBX1-204ENST00000467957 EIF3JO75822 258 aaKnown RBP21.53■■□□□ 1.04
YBX1-204ENST00000467957 ASGR1P07306 291 aa21.53■■□□□ 1.04
YBX1-204ENST00000467957 NR3C2P08235 984 aa21.53■■□□□ 1.04
YBX1-204ENST00000467957 EIF2AK2P19525 551 aaKnown RBP21.53■■□□□ 1.04
YBX1-204ENST00000467957 RTP1P59025 263 aa21.53■■□□□ 1.04
YBX1-204ENST00000467957 CYP46A1Q9Y6A2 500 aa21.53■■□□□ 1.04
YBX1-204ENST00000467957 ELP1O95163 1332 aa21.53■■□□□ 1.04
YBX1-204ENST00000467957 CDC27P30260 824 aa21.52■■□□□ 1.04
YBX1-204ENST00000467957 METAP2P50579 478 aaKnown RBP eCLIP21.52■■□□□ 1.044e-34■■□□□ 13.2
YBX1-204ENST00000467957 ANAPC15P60006 121 aa21.52■■□□□ 1.04
YBX1-204ENST00000467957 FSCN1Q16658 493 aaKnown RBP21.52■■□□□ 1.04
YBX1-204ENST00000467957 GLT1D1Q96MS3 346 aa21.52■■□□□ 1.04
YBX1-204ENST00000467957 STARD7Q9NQZ5 370 aa21.52■■□□□ 1.04
YBX1-204ENST00000467957 KIAA1217Q5T5P2 1943 aa21.51■■□□□ 1.03
YBX1-204ENST00000467957 hCG_1642624A0A1W2PR95 340 aa21.51■■□□□ 1.03
YBX1-204ENST00000467957 BEX3Q00994 111 aa21.51■■□□□ 1.03
YBX1-204ENST00000467957 TTLL4Q14679 1199 aa21.51■■□□□ 1.03
YBX1-204ENST00000467957 CCDC62Q6P9F0 684 aa21.51■■□□□ 1.03
YBX1-204ENST00000467957 VSIG10LQ86VR7 867 aa21.51■■□□□ 1.03
YBX1-204ENST00000467957 NAP1L2Q9ULW6 460 aaPredicted RBP21.51■■□□□ 1.03
YBX1-204ENST00000467957 DNAH12Q6ZR08 3092 aa21.51■■□□□ 1.03
YBX1-204ENST00000467957 FRMPD4Q14CM0 1322 aa21.51■■□□□ 1.03
YBX1-204ENST00000467957 MEIS2O14770 477 aa21.5■■□□□ 1.03
YBX1-204ENST00000467957 ZEB2O60315 1214 aa21.5■■□□□ 1.03
YBX1-204ENST00000467957 TXNP10599 105 aaKnown RBP21.5■■□□□ 1.03
YBX1-204ENST00000467957 PTGS1P23219 599 aa21.5■■□□□ 1.03
YBX1-204ENST00000467957 ADD1P35611 737 aaKnown RBP21.5■■□□□ 1.03
YBX1-204ENST00000467957 TOB2Q14106 344 aaPredicted RBP21.5■■□□□ 1.03
YBX1-204ENST00000467957 PGM5Q15124 567 aa21.5■■□□□ 1.03
YBX1-204ENST00000467957 TRIM60Q495X7 471 aa21.5■■□□□ 1.03
YBX1-204ENST00000467957 FCHSD1Q86WN1 690 aa21.5■■□□□ 1.03
YBX1-204ENST00000467957 TEX2Q8IWB9 1127 aa21.5■■□□□ 1.03
YBX1-204ENST00000467957 CUL5Q93034 780 aa21.5■■□□□ 1.03
YBX1-204ENST00000467957 IL17RAQ96F46 866 aa21.5■■□□□ 1.03
YBX1-204ENST00000467957 ZMYND8Q9ULU4 1186 aaPredicted RBP21.5■■□□□ 1.03
YBX1-204ENST00000467957 ATP11BQ9Y2G3 1177 aa21.5■■□□□ 1.03
YBX1-204ENST00000467957 hCG_1984214I3L0E3 225 aa21.49■■□□□ 1.03
YBX1-204ENST00000467957 CABYRO75952 493 aa21.49■■□□□ 1.03
YBX1-204ENST00000467957 ARIH2O95376 493 aa21.49■■□□□ 1.03
YBX1-204ENST00000467957 ZNF713Q8N859 430 aaPredicted RBP21.49■■□□□ 1.03
YBX1-204ENST00000467957 SMARCC2Q8TAQ2 1214 aa21.49■■□□□ 1.03
YBX1-204ENST00000467957 PRO3102Q9H379 93 aa21.49■■□□□ 1.03
YBX1-204ENST00000467957 PSTPIP2Q9H939 334 aa21.49■■□□□ 1.03
YBX1-204ENST00000467957 V9GY48 417 aaPredicted RBP21.49■■□□□ 1.03
YBX1-204ENST00000467957 PDIA3P30101 505 aaKnown RBP21.48■■□□□ 1.03
YBX1-204ENST00000467957 CCND2P30279 289 aa21.48■■□□□ 1.03
YBX1-204ENST00000467957 CPT1AP50416 773 aa21.48■■□□□ 1.03
YBX1-204ENST00000467957 WWC2Q6AWC2 1192 aa21.48■■□□□ 1.03
YBX1-204ENST00000467957 PPP1R18Q6NYC8 613 aa21.48■■□□□ 1.03
YBX1-204ENST00000467957 USP17L6PQ6QN14 398 aa21.48■■□□□ 1.03
YBX1-204ENST00000467957 SEPT14Q6ZU15 432 aa21.48■■□□□ 1.03
YBX1-204ENST00000467957 ANKRD33Q7Z3H0 272 aa21.48■■□□□ 1.03
YBX1-204ENST00000467957 HEATR3Q7Z4Q2 680 aa21.48■■□□□ 1.03
YBX1-204ENST00000467957 OR6J1Q8NGC5 347 aa21.48■■□□□ 1.03
YBX1-204ENST00000467957 IL31RAQ8NI17 732 aa21.48■■□□□ 1.03
YBX1-204ENST00000467957 TOX2Q96NM4 488 aa21.48■■□□□ 1.03
YBX1-204ENST00000467957 UPF3BQ9BZI7 483 aaKnown RBP21.48■■□□□ 1.03
YBX1-204ENST00000467957 COLQQ9Y215 455 aaPredicted RBP21.48■■□□□ 1.03
YBX1-204ENST00000467957 STAM2O75886 525 aa21.47■■□□□ 1.03
YBX1-204ENST00000467957 MYCLP12524 364 aaPredicted RBP21.47■■□□□ 1.03
YBX1-204ENST00000467957 SYN1P17600 705 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms