RNA–Protein interactions for RNA: ENST00000467847.1

TRIM56-203, Transcript of tripartite motif containing 56, humanhuman

TSL 2

Gene TRIM56, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-203ENST00000467847 MYH6P13533 1939 aa20.23■□□□□ 0.83
TRIM56-203ENST00000467847 TNKSO95271 1327 aa20.23■□□□□ 0.83
TRIM56-203ENST00000467847 KDM4AO75164 1064 aa20.22■□□□□ 0.83
TRIM56-203ENST00000467847 CYP2C9P11712 490 aa20.22■□□□□ 0.83
TRIM56-203ENST00000467847 NT5C2P49902 561 aa20.22■□□□□ 0.83
TRIM56-203ENST00000467847 CCDC178Q5BJE1 867 aa20.22■□□□□ 0.83
TRIM56-203ENST00000467847 FAM47CQ5HY64 1035 aa20.22■□□□□ 0.83
TRIM56-203ENST00000467847 PNMA1Q8ND90 353 aa20.22■□□□□ 0.83
TRIM56-203ENST00000467847 UBA5Q9GZZ9 404 aa20.22■□□□□ 0.83
TRIM56-203ENST00000467847 NKX2-4Q9H2Z4 354 aa20.22■□□□□ 0.83
TRIM56-203ENST00000467847 SLC28A3Q9HAS3 691 aa20.22■□□□□ 0.83
TRIM56-203ENST00000467847 SLC4A7Q9Y6M7 1214 aa20.22■□□□□ 0.83
TRIM56-203ENST00000467847 CHD7Q9P2D1 2997 aa20.21■□□□□ 0.83
TRIM56-203ENST00000467847 SCN5AQ14524 2016 aa20.21■□□□□ 0.83
TRIM56-203ENST00000467847 TXNP10599 105 aaKnown RBP20.21■□□□□ 0.83
TRIM56-203ENST00000467847 PLA2G5P39877 138 aa20.21■□□□□ 0.83
TRIM56-203ENST00000467847 NUCB1Q02818 461 aa20.21■□□□□ 0.83
TRIM56-203ENST00000467847 CDC37Q16543 378 aaPredicted RBP20.21■□□□□ 0.83
TRIM56-203ENST00000467847 NBPF20Q3BBV1 942 aa20.21■□□□□ 0.83
TRIM56-203ENST00000467847 RGS22Q8NE09 1264 aa20.21■□□□□ 0.83
TRIM56-203ENST00000467847 COPS5Q92905 334 aa20.21■□□□□ 0.83
TRIM56-203ENST00000467847 OSBPL3Q9H4L5 887 aa20.21■□□□□ 0.83
TRIM56-203ENST00000467847 KAT14Q9H8E8 782 aa20.21■□□□□ 0.83
TRIM56-203ENST00000467847 YBX2Q9Y2T7 364 aaKnown RBP20.21■□□□□ 0.83
TRIM56-203ENST00000467847 A6NJR5 290 aa20.2■□□□□ 0.82
TRIM56-203ENST00000467847 ZBBXA8MT70 800 aa20.2■□□□□ 0.82
TRIM56-203ENST00000467847 KPNA6O60684 536 aa20.2■□□□□ 0.82
TRIM56-203ENST00000467847 ADAMTS19Q8TE59 1207 aa20.2■□□□□ 0.82
TRIM56-203ENST00000467847 ASB2Q96Q27 587 aa20.2■□□□□ 0.82
TRIM56-203ENST00000467847 ZSCAN10Q96SZ4 725 aaPredicted RBP20.2■□□□□ 0.82
TRIM56-203ENST00000467847 MUC3AQ02505 3323 aa20.2■□□□□ 0.82
TRIM56-203ENST00000467847 B4E1Z4 1266 aa20.19■□□□□ 0.82
TRIM56-203ENST00000467847 HIP1O00291 1037 aa20.19■□□□□ 0.82
TRIM56-203ENST00000467847 IGHDP01880 384 aa20.19■□□□□ 0.82
TRIM56-203ENST00000467847 PFKMP08237 780 aa20.19■□□□□ 0.82
TRIM56-203ENST00000467847 RABGGTBP53611 331 aa20.19■□□□□ 0.82
TRIM56-203ENST00000467847 MRPS5P82675 430 aaKnown RBP20.19■□□□□ 0.82
TRIM56-203ENST00000467847 TTLL4Q14679 1199 aa20.19■□□□□ 0.82
TRIM56-203ENST00000467847 NFRKBQ6P4R8 1299 aa20.19■□□□□ 0.82
TRIM56-203ENST00000467847 DEFB128Q7Z7B8 93 aa20.19■□□□□ 0.82
TRIM56-203ENST00000467847 ADGRF4Q8IZF3 695 aa20.19■□□□□ 0.82
TRIM56-203ENST00000467847 PPP1R13LQ8WUF5 828 aa20.19■□□□□ 0.82
TRIM56-203ENST00000467847 VWCEQ96DN2 955 aa20.19■□□□□ 0.82
TRIM56-203ENST00000467847 UHRF1Q96T88 793 aaPredicted RBP20.19■□□□□ 0.82
TRIM56-203ENST00000467847 ABCB11O95342 1321 aa20.19■□□□□ 0.82
TRIM56-203ENST00000467847 KIAA1217Q5T5P2 1943 aa20.19■□□□□ 0.82
TRIM56-203ENST00000467847 TANC1Q9C0D5 1861 aa20.18■□□□□ 0.82
TRIM56-203ENST00000467847 ARIH2O95376 493 aa20.18■□□□□ 0.82
TRIM56-203ENST00000467847 IGFBP4P22692 258 aa20.18■□□□□ 0.82
TRIM56-203ENST00000467847 ADGRE1Q14246 886 aa20.18■□□□□ 0.82
TRIM56-203ENST00000467847 ASPRV1Q53RT3 343 aa20.18■□□□□ 0.82
TRIM56-203ENST00000467847 ENAHQ8N8S7 591 aaPredicted RBP20.18■□□□□ 0.82
TRIM56-203ENST00000467847 ANKS1AQ92625 1134 aa20.18■□□□□ 0.82
TRIM56-203ENST00000467847 DHX16O60231 1041 aaKnown RBP20.17■□□□□ 0.82
TRIM56-203ENST00000467847 ATP2A2P16615 1042 aaKnown RBP20.17■□□□□ 0.82
TRIM56-203ENST00000467847 CHMP4BP1P59074 171 aa20.17■□□□□ 0.82
TRIM56-203ENST00000467847 CCDC85BQ15834 202 aaPredicted RBP20.17■□□□□ 0.82
TRIM56-203ENST00000467847 IMMTQ16891 758 aaKnown RBP20.17■□□□□ 0.82
TRIM56-203ENST00000467847 PPP2R2DQ66LE6 453 aa20.17■□□□□ 0.82
TRIM56-203ENST00000467847 MCF2L2Q86YR7 1114 aa20.17■□□□□ 0.82
TRIM56-203ENST00000467847 NSUN6Q8TEA1 469 aaKnown RBP20.17■□□□□ 0.82
TRIM56-203ENST00000467847 TBC1D5Q92609 795 aa20.17■□□□□ 0.82
TRIM56-203ENST00000467847 YTHDC1Q96MU7 727 aaKnown RBP20.17■□□□□ 0.82
TRIM56-203ENST00000467847 DSCC1Q9BVC3 393 aa20.17■□□□□ 0.82
TRIM56-203ENST00000467847 MAF1Q9H063 256 aa20.17■□□□□ 0.82
TRIM56-203ENST00000467847 ZSWIM5Q9P217 1185 aa20.17■□□□□ 0.82
TRIM56-203ENST00000467847 PCDHA11Q9Y5I1 949 aa20.17■□□□□ 0.82
TRIM56-203ENST00000467847 PARP1P09874 1014 aaKnown RBP20.16■□□□□ 0.82
TRIM56-203ENST00000467847 MYOGP15173 224 aa20.16■□□□□ 0.82
TRIM56-203ENST00000467847 RFC2P35250 354 aa20.16■□□□□ 0.82
TRIM56-203ENST00000467847 PTPN11Q06124 597 aaPredicted RBP20.16■□□□□ 0.82
TRIM56-203ENST00000467847 QRICH1Q2TAL8 776 aa20.16■□□□□ 0.82
TRIM56-203ENST00000467847 SEPT14Q6ZU15 432 aa20.16■□□□□ 0.82
TRIM56-203ENST00000467847 RETREG2Q8NC44 543 aa20.16■□□□□ 0.82
TRIM56-203ENST00000467847 SYTL5Q8TDW5 730 aaPredicted RBP20.16■□□□□ 0.82
TRIM56-203ENST00000467847 TAAR1Q96RJ0 339 aa20.16■□□□□ 0.82
TRIM56-203ENST00000467847 KRT23Q9C075 422 aa20.16■□□□□ 0.82
TRIM56-203ENST00000467847 CTNNA3Q9UI47 895 aa20.16■□□□□ 0.82
TRIM56-203ENST00000467847 NOD1Q9Y239 953 aa20.16■□□□□ 0.82
TRIM56-203ENST00000467847 TRIP12Q14669 1992 aaPredicted RBP20.15■□□□□ 0.82
TRIM56-203ENST00000467847 PITPNM1O00562 1244 aa20.15■□□□□ 0.82
TRIM56-203ENST00000467847 ACTN1P12814 892 aa20.15■□□□□ 0.82
TRIM56-203ENST00000467847 CCDC62Q6P9F0 684 aa20.15■□□□□ 0.82
TRIM56-203ENST00000467847 FBXO11Q86XK2 927 aa20.15■□□□□ 0.82
TRIM56-203ENST00000467847 AFG1LQ8WV93 481 aa20.15■□□□□ 0.82
TRIM56-203ENST00000467847 RMDN3Q96TC7 470 aa20.15■□□□□ 0.82
TRIM56-203ENST00000467847 UBAC1Q9BSL1 405 aa20.15■□□□□ 0.82
TRIM56-203ENST00000467847 TSPYL2Q9H2G4 693 aaPredicted RBP20.15■□□□□ 0.82
TRIM56-203ENST00000467847 CNNM2Q9H8M5 875 aa20.15■□□□□ 0.82
TRIM56-203ENST00000467847 VAT1LQ9HCJ6 419 aa20.15■□□□□ 0.82
TRIM56-203ENST00000467847 COL20A1Q9P218 1284 aa20.15■□□□□ 0.82
TRIM56-203ENST00000467847 MRPL11Q9Y3B7 192 aaKnown RBP20.15■□□□□ 0.82
TRIM56-203ENST00000467847 GH1P01241 217 aa20.14■□□□□ 0.81
TRIM56-203ENST00000467847 BFSP2Q13515 415 aa20.14■□□□□ 0.81
TRIM56-203ENST00000467847 STXBP2Q15833 593 aa20.14■□□□□ 0.81
TRIM56-203ENST00000467847 LY6KQ17RY6 165 aa20.14■□□□□ 0.81
TRIM56-203ENST00000467847 EXOC6Q8TAG9 804 aa20.14■□□□□ 0.81
TRIM56-203ENST00000467847 IWS1Q96ST2 819 aa20.14■□□□□ 0.81
TRIM56-203ENST00000467847 JMJD4Q9H9V9 463 aa20.14■□□□□ 0.81
TRIM56-203ENST00000467847 MMP3P08254 477 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms