RNA–Protein interactions for RNA: ENST00000467717.5

VARS2-204, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 863 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-204ENST00000467717 PRPF38BQ5VTL8 546 aaKnown RBP19.55■□□□□ 0.72
VARS2-204ENST00000467717 JAKMIP3Q5VZ66 844 aa19.55■□□□□ 0.72
VARS2-204ENST00000467717 ZNF467Q7Z7K2 595 aaPredicted RBP19.55■□□□□ 0.72
VARS2-204ENST00000467717 DIS3L2Q8IYB7 885 aaKnown RBP19.55■□□□□ 0.72
VARS2-204ENST00000467717 NSUN6Q8TEA1 469 aaKnown RBP19.55■□□□□ 0.72
VARS2-204ENST00000467717 PCDHA6Q9UN73 950 aa19.55■□□□□ 0.72
VARS2-204ENST00000467717 PCDHA8Q9Y5H6 950 aa19.55■□□□□ 0.72
VARS2-204ENST00000467717 LOC102724159A0A0B4J2E5 919 aa19.54■□□□□ 0.72
VARS2-204ENST00000467717 ADAMTS3O15072 1205 aa19.54■□□□□ 0.72
VARS2-204ENST00000467717 SOX10P56693 466 aa19.54■□□□□ 0.72
VARS2-204ENST00000467717 PWP2Q15269 919 aaKnown RBP19.54■□□□□ 0.72
VARS2-204ENST00000467717 ARHGEF16Q5VV41 709 aa19.54■□□□□ 0.72
VARS2-204ENST00000467717 CTU1Q7Z7A3 348 aaKnown RBP19.54■□□□□ 0.72
VARS2-204ENST00000467717 NPLOC4Q8TAT6 608 aa19.54■□□□□ 0.72
VARS2-204ENST00000467717 RAET1EQ8TD07 263 aa19.54■□□□□ 0.72
VARS2-204ENST00000467717 RASGRP4Q8TDF6 673 aa19.54■□□□□ 0.72
VARS2-204ENST00000467717 MAML3Q96JK9 1138 aa19.54■□□□□ 0.72
VARS2-204ENST00000467717 FGD4Q96M96 766 aa19.54■□□□□ 0.72
VARS2-204ENST00000467717 TMEM260Q9NX78 707 aa19.54■□□□□ 0.72
VARS2-204ENST00000467717 BTBD18B2RXH4 712 aa19.53■□□□□ 0.72
VARS2-204ENST00000467717 B4DLN1 442 aa19.53■□□□□ 0.72
VARS2-204ENST00000467717 M0R2N6 131 aa19.53■□□□□ 0.72
VARS2-204ENST00000467717 PDIA4P13667 645 aaKnown RBP19.53■□□□□ 0.72
VARS2-204ENST00000467717 SYT1P21579 422 aa19.53■□□□□ 0.72
VARS2-204ENST00000467717 ALDH5A1P51649 535 aaPredicted RBP19.53■□□□□ 0.72
VARS2-204ENST00000467717 OLFML2BQ68BL8 750 aa19.53■□□□□ 0.72
VARS2-204ENST00000467717 MSL3Q8N5Y2 521 aaKnown RBP19.53■□□□□ 0.72
VARS2-204ENST00000467717 OXER1Q8TDS5 423 aa19.53■□□□□ 0.72
VARS2-204ENST00000467717 IWS1Q96ST2 819 aa19.53■□□□□ 0.72
VARS2-204ENST00000467717 MPHOSPH6Q99547 160 aaKnown RBP19.53■□□□□ 0.72
VARS2-204ENST00000467717 EHMT1Q9H9B1 1298 aa19.53■□□□□ 0.72
VARS2-204ENST00000467717 PXMP2Q9NR77 195 aa19.53■□□□□ 0.72
VARS2-204ENST00000467717 ASTN1O14525 1302 aa19.52■□□□□ 0.72
VARS2-204ENST00000467717 ASB14A6NK59 587 aa19.52■□□□□ 0.72
VARS2-204ENST00000467717 EIF2AK2P19525 551 aaKnown RBP19.52■□□□□ 0.72
VARS2-204ENST00000467717 MAMDC4Q6UXC1 1216 aa19.52■□□□□ 0.72
VARS2-204ENST00000467717 KRT25Q7Z3Z0 450 aa19.52■□□□□ 0.72
VARS2-204ENST00000467717 TRMT44Q8IYL2 757 aaKnown RBP19.52■□□□□ 0.72
VARS2-204ENST00000467717 PDCD2LQ9BRP1 358 aa19.52■□□□□ 0.72
VARS2-204ENST00000467717 TINF2Q9BSI4 451 aa19.52■□□□□ 0.72
VARS2-204ENST00000467717 ANO3Q9BYT9 981 aa19.52■□□□□ 0.72
VARS2-204ENST00000467717 FOXP1Q9H334 677 aaPredicted RBP19.52■□□□□ 0.72
VARS2-204ENST00000467717 PTPN22Q9Y2R2 807 aa19.52■□□□□ 0.72
VARS2-204ENST00000467717 SMCHD1A6NHR9 2005 aa19.52■□□□□ 0.72
VARS2-204ENST00000467717 FRMPD4Q14CM0 1322 aa19.51■□□□□ 0.71
VARS2-204ENST00000467717 RPTORQ8N122 1335 aa19.51■□□□□ 0.71
VARS2-204ENST00000467717 EDNRBP24530 442 aa19.51■□□□□ 0.71
VARS2-204ENST00000467717 NR5A1Q13285 461 aa19.51■□□□□ 0.71
VARS2-204ENST00000467717 GNL2Q13823 731 aaKnown RBP19.51■□□□□ 0.71
VARS2-204ENST00000467717 CCL14Q16627 93 aa19.51■□□□□ 0.71
VARS2-204ENST00000467717 PXYLP1Q8TE99 480 aa19.51■□□□□ 0.71
VARS2-204ENST00000467717 TNFRSF25Q93038 417 aa19.51■□□□□ 0.71
VARS2-204ENST00000467717 PGBD1Q96JS3 809 aa19.51■□□□□ 0.71
VARS2-204ENST00000467717 CCDC194A0A1B0GVG4 234 aa19.5■□□□□ 0.71
VARS2-204ENST00000467717 VPS37CA5D8V6 355 aaPredicted RBP19.5■□□□□ 0.71
VARS2-204ENST00000467717 STX6O43752 255 aa19.5■□□□□ 0.71
VARS2-204ENST00000467717 ADCY3O60266 1144 aa19.5■□□□□ 0.71
VARS2-204ENST00000467717 NR3C2P08235 984 aa19.5■□□□□ 0.71
VARS2-204ENST00000467717 SREBF1P36956 1147 aa19.5■□□□□ 0.71
VARS2-204ENST00000467717 PGM5Q15124 567 aa19.5■□□□□ 0.71
VARS2-204ENST00000467717 PKN2Q16513 984 aaKnown RBP19.5■□□□□ 0.71
VARS2-204ENST00000467717 MCTP1Q6DN14 999 aa19.5■□□□□ 0.71
VARS2-204ENST00000467717 XRRA1Q6P2D8 792 aa19.5■□□□□ 0.71
VARS2-204ENST00000467717 MORC4Q8TE76 937 aa19.5■□□□□ 0.71
VARS2-204ENST00000467717 FLRT1Q9NZU1 646 aa19.5■□□□□ 0.71
VARS2-204ENST00000467717 PTCH2Q9Y6C5 1203 aa19.5■□□□□ 0.71
VARS2-204ENST00000467717 SYNGAP1Q96PV0 1343 aa19.5■□□□□ 0.71
VARS2-204ENST00000467717 IGHA2P01877 340 aa19.49■□□□□ 0.71
VARS2-204ENST00000467717 U2AF2P26368 475 aaKnown RBP eCLIP19.49■□□□□ 0.716e-8■□□□□ 8.3
VARS2-204ENST00000467717 UBXN2AP68543 259 aa19.49■□□□□ 0.71
VARS2-204ENST00000467717 PDE4DQ08499 809 aa19.49■□□□□ 0.71
VARS2-204ENST00000467717 NONOQ15233 471 aaKnown RBP eCLIP19.49■□□□□ 0.71
VARS2-204ENST00000467717 MFSD14CQ5VZR4 134 aa19.49■□□□□ 0.71
VARS2-204ENST00000467717 PIK3AP1Q6ZUJ8 805 aa19.49■□□□□ 0.71
VARS2-204ENST00000467717 ARMCX2Q7L311 632 aa19.49■□□□□ 0.71
VARS2-204ENST00000467717 VSIG10LQ86VR7 867 aa19.49■□□□□ 0.71
VARS2-204ENST00000467717 SLAIN1Q8ND83 568 aa19.49■□□□□ 0.71
VARS2-204ENST00000467717 TRIB2Q92519 343 aa19.49■□□□□ 0.71
VARS2-204ENST00000467717 MTMR6Q9Y217 621 aa19.49■□□□□ 0.71
VARS2-204ENST00000467717 CCND2P30279 289 aa19.48■□□□□ 0.71
VARS2-204ENST00000467717 ARHGAP4P98171 946 aa19.48■□□□□ 0.71
VARS2-204ENST00000467717 STXBP2Q15833 593 aa19.48■□□□□ 0.71
VARS2-204ENST00000467717 PCNX4Q63HM2 1172 aa19.48■□□□□ 0.71
VARS2-204ENST00000467717 NOSTRINQ8IVI9 506 aa19.48■□□□□ 0.71
VARS2-204ENST00000467717 TBCKQ8TEA7 893 aa19.48■□□□□ 0.71
VARS2-204ENST00000467717 CRYGNQ8WXF5 182 aa19.48■□□□□ 0.71
VARS2-204ENST00000467717 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.48■□□□□ 0.71
VARS2-204ENST00000467717 MYH6P13533 1939 aa19.48■□□□□ 0.71
VARS2-204ENST00000467717 ZNF236Q9UL36 1845 aa19.48■□□□□ 0.71
VARS2-204ENST00000467717 KIF28PB7ZC32 967 aa19.47■□□□□ 0.71
VARS2-204ENST00000467717 EIF3JO75822 258 aaKnown RBP19.47■□□□□ 0.71
VARS2-204ENST00000467717 SNAI1O95863 264 aaPredicted RBP19.47■□□□□ 0.71
VARS2-204ENST00000467717 HMGCRP04035 888 aa19.47■□□□□ 0.71
VARS2-204ENST00000467717 MYCLP12524 364 aaPredicted RBP19.47■□□□□ 0.71
VARS2-204ENST00000467717 ELNP15502 786 aa19.47■□□□□ 0.71
VARS2-204ENST00000467717 GRK4P32298 578 aa19.47■□□□□ 0.71
VARS2-204ENST00000467717 CYP2C19P33261 490 aa19.47■□□□□ 0.71
VARS2-204ENST00000467717 EARS2Q5JPH6 523 aaKnown RBP19.47■□□□□ 0.71
VARS2-204ENST00000467717 IL31RAQ8NI17 732 aa19.47■□□□□ 0.71
VARS2-204ENST00000467717 IPO9Q96P70 1041 aaKnown RBP19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms