RNA–Protein interactions for RNA: ENST00000467308.1

TSSC4-208, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

TSL 3

Gene TSSC4, Length 409 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-208ENST00000467308 TTBK2Q6IQ55 1244 aa18.47■□□□□ 0.55
TSSC4-208ENST00000467308 DEFB128Q7Z7B8 93 aa18.47■□□□□ 0.55
TSSC4-208ENST00000467308 SLC9A7Q96T83 725 aa18.47■□□□□ 0.55
TSSC4-208ENST00000467308 MPHOSPH6Q99547 160 aaKnown RBP18.47■□□□□ 0.55
TSSC4-208ENST00000467308 TANC1Q9C0D5 1861 aa18.47■□□□□ 0.55
TSSC4-208ENST00000467308 A6NJR5 290 aa18.46■□□□□ 0.55
TSSC4-208ENST00000467308 GTPBP6O43824 516 aaPredicted RBP18.46■□□□□ 0.55
TSSC4-208ENST00000467308 PTPN11Q06124 597 aaPredicted RBP18.46■□□□□ 0.55
TSSC4-208ENST00000467308 PPP2R5BQ15173 497 aa18.46■□□□□ 0.55
TSSC4-208ENST00000467308 NBPF20Q3BBV1 942 aa18.46■□□□□ 0.55
TSSC4-208ENST00000467308 RNF207Q6ZRF8 634 aa18.46■□□□□ 0.55
TSSC4-208ENST00000467308 MICALL1Q8N3F8 863 aa18.46■□□□□ 0.55
TSSC4-208ENST00000467308 DNERQ8NFT8 737 aa18.46■□□□□ 0.55
TSSC4-208ENST00000467308 SCFD2Q8WU76 684 aa18.46■□□□□ 0.55
TSSC4-208ENST00000467308 CLEC4DQ8WXI8 215 aa18.46■□□□□ 0.55
TSSC4-208ENST00000467308 TCP11L1Q9NUJ3 509 aa18.46■□□□□ 0.55
TSSC4-208ENST00000467308 MTCH2Q9Y6C9 303 aa18.46■□□□□ 0.55
TSSC4-208ENST00000467308 IQCF3P0C7M6 154 aa18.45■□□□□ 0.54
TSSC4-208ENST00000467308 EDNRBP24530 442 aa18.45■□□□□ 0.54
TSSC4-208ENST00000467308 PDE4DQ08499 809 aa18.45■□□□□ 0.54
TSSC4-208ENST00000467308 FAM47CQ5HY64 1035 aa18.45■□□□□ 0.54
TSSC4-208ENST00000467308 VPS53Q5VIR6 699 aa18.45■□□□□ 0.54
TSSC4-208ENST00000467308 SLC30A10Q6XR72 485 aa18.45■□□□□ 0.54
TSSC4-208ENST00000467308 RETREG2Q8NC44 543 aa18.45■□□□□ 0.54
TSSC4-208ENST00000467308 TMEM47Q9BQJ4 181 aa18.45■□□□□ 0.54
TSSC4-208ENST00000467308 TET1Q8NFU7 2136 aa18.44■□□□□ 0.54
TSSC4-208ENST00000467308 GSPT1P15170 499 aaKnown RBP18.44■□□□□ 0.54
TSSC4-208ENST00000467308 CALML3P27482 149 aa18.44■□□□□ 0.54
TSSC4-208ENST00000467308 TFF2Q03403 129 aa18.44■□□□□ 0.54
TSSC4-208ENST00000467308 BFSP2Q13515 415 aa18.44■□□□□ 0.54
TSSC4-208ENST00000467308 TICAM2Q86XR7 235 aa18.44■□□□□ 0.54
TSSC4-208ENST00000467308 C1QTNF1Q9BXJ1 281 aa18.44■□□□□ 0.54
TSSC4-208ENST00000467308 TRIP12Q14669 1992 aaPredicted RBP18.44■□□□□ 0.54
TSSC4-208ENST00000467308 FRMPD2Q68DX3 1309 aaPredicted RBP18.44■□□□□ 0.54
TSSC4-208ENST00000467308 WDR19Q8NEZ3 1342 aa18.44■□□□□ 0.54
TSSC4-208ENST00000467308 B4DLN1 442 aa18.43■□□□□ 0.54
TSSC4-208ENST00000467308 PDHBP11177 359 aa18.43■□□□□ 0.54
TSSC4-208ENST00000467308 MRPL12P52815 198 aaKnown RBP18.43■□□□□ 0.54
TSSC4-208ENST00000467308 RPS6P62753 249 aaKnown RBP18.43■□□□□ 0.54
TSSC4-208ENST00000467308 SKIV2LQ15477 1246 aaKnown RBP18.43■□□□□ 0.54
TSSC4-208ENST00000467308 HERC6Q8IVU3 1022 aa18.43■□□□□ 0.54
TSSC4-208ENST00000467308 EVI5LQ96CN4 794 aa18.43■□□□□ 0.54
TSSC4-208ENST00000467308 NECAB3Q96P71 396 aaPredicted RBP18.43■□□□□ 0.54
TSSC4-208ENST00000467308 GPCPD1Q9NPB8 672 aa18.43■□□□□ 0.54
TSSC4-208ENST00000467308 HELLSQ9NRZ9 838 aa18.43■□□□□ 0.54
TSSC4-208ENST00000467308 TOMM22Q9NS69 142 aa18.43■□□□□ 0.54
TSSC4-208ENST00000467308 RAPGEFL1Q9UHV5 662 aa18.43■□□□□ 0.54
TSSC4-208ENST00000467308 COG5Q9UP83 839 aa18.43■□□□□ 0.54
TSSC4-208ENST00000467308 KIF28PB7ZC32 967 aa18.42■□□□□ 0.54
TSSC4-208ENST00000467308 RFXAPO00287 272 aa18.42■□□□□ 0.54
TSSC4-208ENST00000467308 BAIAP3O94812 1187 aa18.42■□□□□ 0.54
TSSC4-208ENST00000467308 TXNP10599 105 aaKnown RBP18.42■□□□□ 0.54
TSSC4-208ENST00000467308 KCNQ1P51787 676 aa18.42■□□□□ 0.54
TSSC4-208ENST00000467308 TAP1Q03518 808 aa18.42■□□□□ 0.54
TSSC4-208ENST00000467308 ZNF543Q08ER8 600 aa18.42■□□□□ 0.54
TSSC4-208ENST00000467308 TTC14Q96N46 770 aa18.42■□□□□ 0.54
TSSC4-208ENST00000467308 FTOQ9C0B1 505 aaKnown RBP eCLIP18.42■□□□□ 0.54
TSSC4-208ENST00000467308 MAF1Q9H063 256 aa18.42■□□□□ 0.54
TSSC4-208ENST00000467308 ZMYM6O95789 1325 aa18.42■□□□□ 0.54
TSSC4-208ENST00000467308 EPOPA6NHQ4 379 aa18.41■□□□□ 0.54
TSSC4-208ENST00000467308 FGAP02671 866 aa18.41■□□□□ 0.54
TSSC4-208ENST00000467308 SNHG28P0DPA3 235 aa18.41■□□□□ 0.54
TSSC4-208ENST00000467308 PCP11498 1178 aaKnown RBP18.41■□□□□ 0.54
TSSC4-208ENST00000467308 PLA2G5P39877 138 aa18.41■□□□□ 0.54
TSSC4-208ENST00000467308 RRP12Q5JTH9 1297 aaKnown RBP18.41■□□□□ 0.54
TSSC4-208ENST00000467308 RGS22Q8NE09 1264 aa18.41■□□□□ 0.54
TSSC4-208ENST00000467308 CERS4Q9HA82 394 aa18.41■□□□□ 0.54
TSSC4-208ENST00000467308 NOD1Q9Y239 953 aa18.41■□□□□ 0.54
TSSC4-208ENST00000467308 SDSP20132 328 aa18.4■□□□□ 0.54
TSSC4-208ENST00000467308 SESTD1Q86VW0 696 aa18.4■□□□□ 0.54
TSSC4-208ENST00000467308 CCDC155Q8N6L0 562 aa18.4■□□□□ 0.54
TSSC4-208ENST00000467308 CAGE1Q8TC20 777 aa18.4■□□□□ 0.54
TSSC4-208ENST00000467308 ARNTL2Q8WYA1 636 aa18.4■□□□□ 0.54
TSSC4-208ENST00000467308 COPS5Q92905 334 aa18.4■□□□□ 0.54
TSSC4-208ENST00000467308 PTPRSQ13332 1948 aa18.39■□□□□ 0.53
TSSC4-208ENST00000467308 MCMDC2Q4G0Z9 681 aa18.39■□□□□ 0.53
TSSC4-208ENST00000467308 GPATCH4Q5T3I0 446 aaKnown RBP18.39■□□□□ 0.53
TSSC4-208ENST00000467308 AFAP1L1Q8TED9 768 aa18.39■□□□□ 0.53
TSSC4-208ENST00000467308 BRWD1Q9NSI6 2320 aa18.38■□□□□ 0.53
TSSC4-208ENST00000467308 TLL1O43897 1013 aa18.38■□□□□ 0.53
TSSC4-208ENST00000467308 ARHGEF15O94989 841 aa18.38■□□□□ 0.53
TSSC4-208ENST00000467308 ARIH2O95376 493 aa18.38■□□□□ 0.53
TSSC4-208ENST00000467308 PARNO95453 639 aaKnown RBP18.38■□□□□ 0.53
TSSC4-208ENST00000467308 HSPD1P10809 573 aaKnown RBP18.38■□□□□ 0.53
TSSC4-208ENST00000467308 PTGISQ16647 500 aa18.38■□□□□ 0.53
TSSC4-208ENST00000467308 CCDC62Q6P9F0 684 aa18.38■□□□□ 0.53
TSSC4-208ENST00000467308 PPP1R13LQ8WUF5 828 aa18.38■□□□□ 0.53
TSSC4-208ENST00000467308 HLA-CQ95604 372 aa18.38■□□□□ 0.53
TSSC4-208ENST00000467308 FAM122AQ96E09 287 aa18.38■□□□□ 0.53
TSSC4-208ENST00000467308 KIAA1217Q5T5P2 1943 aa18.38■□□□□ 0.53
TSSC4-208ENST00000467308 KCNJ6P48051 423 aa18.37■□□□□ 0.53
TSSC4-208ENST00000467308 RBL2Q08999 1139 aa18.37■□□□□ 0.53
TSSC4-208ENST00000467308 GRB10Q13322 594 aa18.37■□□□□ 0.53
TSSC4-208ENST00000467308 C8orf34Q49A92 452 aa18.37■□□□□ 0.53
TSSC4-208ENST00000467308 KRT40Q6A162 431 aa18.37■□□□□ 0.53
TSSC4-208ENST00000467308 MFSD6Q6ZSS7 791 aa18.37■□□□□ 0.53
TSSC4-208ENST00000467308 AFG1LQ8WV93 481 aa18.37■□□□□ 0.53
TSSC4-208ENST00000467308 FAM227BQ96M60 508 aa18.37■□□□□ 0.53
TSSC4-208ENST00000467308 CTAGE1Q96RT6 745 aa18.37■□□□□ 0.53
TSSC4-208ENST00000467308 LMCD1Q9NZU5 365 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms