RNA–Protein interactions for RNA: ENST00000467077.1

XRN1-206, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 674 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-206ENST00000467077 INTS3Q68E01 1043 aaKnown RBP7.17□□□□□ -1.26
XRN1-206ENST00000467077 DCP2Q8IU60 420 aaKnown RBP7.17□□□□□ -1.26
XRN1-206ENST00000467077 RNF34Q969K3 372 aa7.17□□□□□ -1.26
XRN1-206ENST00000467077 SEMA4AQ9H3S1 761 aa7.17□□□□□ -1.26
XRN1-206ENST00000467077 CD248Q9HCU0 757 aa7.17□□□□□ -1.26
XRN1-206ENST00000467077 JADE2Q9NQC1 790 aa7.17□□□□□ -1.26
XRN1-206ENST00000467077 FAM86C1Q9NVL1 165 aa7.17□□□□□ -1.26
XRN1-206ENST00000467077 GULP1Q9UBP9 304 aa7.17□□□□□ -1.26
XRN1-206ENST00000467077 FBLN5Q9UBX5 448 aa7.17□□□□□ -1.26
XRN1-206ENST00000467077 ING1Q9UK53 422 aaPredicted RBP7.17□□□□□ -1.26
XRN1-206ENST00000467077 DDX3XO00571 662 aaKnown RBP eCLIP7.16□□□□□ -1.26
XRN1-206ENST00000467077 PRAMEF18Q5VWM3 479 aa7.16□□□□□ -1.26
XRN1-206ENST00000467077 CD300LDQ6UXZ3 194 aa7.16□□□□□ -1.26
XRN1-206ENST00000467077 PPFIBP1Q86W92 1011 aa7.16□□□□□ -1.26
XRN1-206ENST00000467077 ZNF341Q9BYN7 854 aa7.16□□□□□ -1.26
XRN1-206ENST00000467077 AP5M1Q9H0R1 490 aa7.16□□□□□ -1.26
XRN1-206ENST00000467077 B4GALT3O60512 393 aa7.15□□□□□ -1.26
XRN1-206ENST00000467077 TP53P04637 393 aaPredicted RBP7.15□□□□□ -1.26
XRN1-206ENST00000467077 SEPHS1P49903 392 aa7.15□□□□□ -1.26
XRN1-206ENST00000467077 TGFB2P61812 414 aa7.15□□□□□ -1.26
XRN1-206ENST00000467077 PPP2R5DQ14738 602 aa7.15□□□□□ -1.26
XRN1-206ENST00000467077 AXDND1Q5T1B0 1012 aaPredicted RBP7.15□□□□□ -1.26
XRN1-206ENST00000467077 NKD1Q969G9 470 aa7.15□□□□□ -1.26
XRN1-206ENST00000467077 C11orf21Q9P2W6 132 aa7.15□□□□□ -1.26
XRN1-206ENST00000467077 PATL2C9JE40 543 aaKnown RBP7.14□□□□□ -1.27
XRN1-206ENST00000467077 STXBP3O00186 592 aa7.14□□□□□ -1.27
XRN1-206ENST00000467077 ACRP10323 421 aa7.14□□□□□ -1.27
XRN1-206ENST00000467077 ITGA1P56199 1179 aa7.14□□□□□ -1.27
XRN1-206ENST00000467077 FHL2Q14192 279 aa7.14□□□□□ -1.27
XRN1-206ENST00000467077 TCEAL1Q15170 157 aa7.14□□□□□ -1.27
XRN1-206ENST00000467077 MTA3Q9BTC8 594 aa7.14□□□□□ -1.27
XRN1-206ENST00000467077 ZNF451Q9Y4E5 1061 aa7.14□□□□□ -1.27
XRN1-206ENST00000467077 TRBV23OR9-2A0A075B6M9 112 aa7.13□□□□□ -1.27
XRN1-206ENST00000467077 GPR42O15529 346 aa7.13□□□□□ -1.27
XRN1-206ENST00000467077 NTRK1P04629 796 aa7.13□□□□□ -1.27
XRN1-206ENST00000467077 SPDYAQ5MJ70 313 aa7.13□□□□□ -1.27
XRN1-206ENST00000467077 ARHGEF18Q6ZSZ5 1173 aa7.13□□□□□ -1.27
XRN1-206ENST00000467077 STK32CQ86UX6 486 aa7.13□□□□□ -1.27
XRN1-206ENST00000467077 DNERQ8NFT8 737 aa7.13□□□□□ -1.27
XRN1-206ENST00000467077 IGDCC4Q8TDY8 1250 aa7.13□□□□□ -1.27
XRN1-206ENST00000467077 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.13□□□□□ -1.27
XRN1-206ENST00000467077 DIS3Q9Y2L1 958 aaKnown RBP7.13□□□□□ -1.27
XRN1-206ENST00000467077 SIT1Q9Y3P8 196 aa7.13□□□□□ -1.27
XRN1-206ENST00000467077 AURKAO14965 403 aa7.12□□□□□ -1.27
XRN1-206ENST00000467077 NPHS1O60500 1241 aa7.12□□□□□ -1.27
XRN1-206ENST00000467077 IMPDH2P12268 514 aa7.12□□□□□ -1.27
XRN1-206ENST00000467077 TAB3Q8N5C8 712 aaPredicted RBP7.12□□□□□ -1.27
XRN1-206ENST00000467077 SYT3Q9BQG1 590 aa7.12□□□□□ -1.27
XRN1-206ENST00000467077 BACE2Q9Y5Z0 518 aa7.12□□□□□ -1.27
XRN1-206ENST00000467077 LTBP3Q9NS15 1303 aa7.11□□□□□ -1.27
XRN1-206ENST00000467077 A0A087WZG4 1122 aa7.11□□□□□ -1.27
XRN1-206ENST00000467077 PAMP19021 973 aa7.11□□□□□ -1.27
XRN1-206ENST00000467077 SMN1Q16637 294 aaKnown RBP7.11□□□□□ -1.27
XRN1-206ENST00000467077 PRR31Q5SQ13 230 aa7.11□□□□□ -1.27
XRN1-206ENST00000467077 HS2ST1Q7LGA3 356 aa7.11□□□□□ -1.27
XRN1-206ENST00000467077 CPNE8Q86YQ8 564 aa7.11□□□□□ -1.27
XRN1-206ENST00000467077 MIB1Q86YT6 1006 aa7.11□□□□□ -1.27
XRN1-206ENST00000467077 SLITRK4Q8IW52 837 aa7.11□□□□□ -1.27
XRN1-206ENST00000467077 FAM26EQ8N5C1 309 aa7.11□□□□□ -1.27
XRN1-206ENST00000467077 TM9SF2Q99805 663 aa7.11□□□□□ -1.27
XRN1-206ENST00000467077 L2HGDHQ9H9P8 463 aa7.11□□□□□ -1.27
XRN1-206ENST00000467077 ADAMTS1Q9UHI8 967 aa7.11□□□□□ -1.27
XRN1-206ENST00000467077 WDR33Q9C0J8 1336 aaKnown RBP7.1□□□□□ -1.27
XRN1-206ENST00000467077 NPHP3-ACAD11A0A0J9YXS1 232 aa7.1□□□□□ -1.27
XRN1-206ENST00000467077 FUCA1P04066 466 aa7.1□□□□□ -1.27
XRN1-206ENST00000467077 INHBEP58166 350 aa7.1□□□□□ -1.27
XRN1-206ENST00000467077 PPP2CBP62714 309 aa7.1□□□□□ -1.27
XRN1-206ENST00000467077 PPP2CAP67775 309 aa7.1□□□□□ -1.27
XRN1-206ENST00000467077 YIPF4Q9BSR8 244 aa7.1□□□□□ -1.27
XRN1-206ENST00000467077 TMEM168Q9H0V1 697 aa7.1□□□□□ -1.27
XRN1-206ENST00000467077 NGRNQ9NPE2 291 aaKnown RBP7.1□□□□□ -1.27
XRN1-206ENST00000467077 WHRNQ9P202 907 aa7.1□□□□□ -1.27
XRN1-206ENST00000467077 GGT7Q9UJ14 662 aa7.1□□□□□ -1.27
XRN1-206ENST00000467077 ZNRF3Q9ULT6 936 aa7.1□□□□□ -1.27
XRN1-206ENST00000467077 ZNF28P17035 718 aa7.09□□□□□ -1.27
XRN1-206ENST00000467077 EPHB4P54760 987 aa7.09□□□□□ -1.27
XRN1-206ENST00000467077 R3HDM1Q15032 1099 aaKnown RBP7.09□□□□□ -1.27
XRN1-206ENST00000467077 DPY19L1Q2PZI1 675 aa7.09□□□□□ -1.27
XRN1-206ENST00000467077 ADCY4Q8NFM4 1077 aa7.09□□□□□ -1.27
XRN1-206ENST00000467077 GBP3Q9H0R5 595 aa7.09□□□□□ -1.27
XRN1-206ENST00000467077 C2orf71A6NGG8 1288 aa7.08□□□□□ -1.28
XRN1-206ENST00000467077 ZNF623O75123 536 aa7.08□□□□□ -1.28
XRN1-206ENST00000467077 SLFN13Q68D06 897 aa7.08□□□□□ -1.28
XRN1-206ENST00000467077 FERD3LQ96RJ6 166 aa7.08□□□□□ -1.28
XRN1-206ENST00000467077 NT5C1AQ9BXI3 368 aa7.08□□□□□ -1.28
XRN1-206ENST00000467077 TESMINQ9Y4I5 508 aa7.08□□□□□ -1.28
XRN1-206ENST00000467077 PATE3B3GLJ2 98 aa7.07□□□□□ -1.28
XRN1-206ENST00000467077 PPP1R11O60927 126 aaPredicted RBP7.07□□□□□ -1.28
XRN1-206ENST00000467077 CYP7B1O75881 506 aa7.07□□□□□ -1.28
XRN1-206ENST00000467077 TGM1P22735 817 aa7.07□□□□□ -1.28
XRN1-206ENST00000467077 PURAQ00577 322 aaKnown RBP7.07□□□□□ -1.28
XRN1-206ENST00000467077 HS1BP3Q53T59 392 aa7.07□□□□□ -1.28
XRN1-206ENST00000467077 FBXO33Q7Z6M2 555 aa7.07□□□□□ -1.28
XRN1-206ENST00000467077 FAM126BQ8IXS8 530 aa7.07□□□□□ -1.28
XRN1-206ENST00000467077 SEC14L1Q92503 715 aa7.07□□□□□ -1.28
XRN1-206ENST00000467077 MCMBPQ9BTE3 642 aa7.07□□□□□ -1.28
XRN1-206ENST00000467077 MARCH2Q9P0N8 246 aa7.07□□□□□ -1.28
XRN1-206ENST00000467077 C7orf72A4D263 438 aa7.06□□□□□ -1.28
XRN1-206ENST00000467077 NPIPB8E9PQR5 432 aa7.06□□□□□ -1.28
XRN1-206ENST00000467077 NKX3-2P78367 333 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms